AT1G75250 : RAD-like 6
Query Information
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AGICode AT1G75250
Description RAD-like 6
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G75250 RAD-like 6 RAD-like 6, RAD-like 6,
RADIALIS-LIKE SANT/MYB 3		 1 0.31 -0.32
2 AT1G61430 S-locus lectin protein kinase family protein 0.72 0.34 -0.33
3 AT4G35820 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.69 0.31 -0.29
4 AT4G02430 RNA-binding (RRM/RBD/RNP motifs) family protein Serine/Arginine-Rich Protein
Splicing Factor 34b,
Serine/Arginine-Rich Protein
Splicing Factor 34b		 -0.69 0.32 -0.33
5 AT1G31040 PLATZ transcription factor family protein 0.69 0.34 -0.33
6 AT5G38580 FBD-like domain family protein -0.68 0.34 -0.32
7 AT1G70040 Protein of unknown function (DUF1163) 0.67 0.31 -0.33
8 AT2G06310 transposable element gene -0.67 0.29 -0.33
9 AT3G15390 silencing defective 5 silencing defective 5 -0.67 0.32 -0.29
10 AT2G19400 AGC (cAMP-dependent, cGMP-dependent and protein kinase C)
kinase family protein		 -0.67 0.34 -0.31
11 AT4G32220 transposable element gene 0.67 0.32 -0.3
12 AT4G04300 transposable element gene 0.66 0.32 -0.29
13 AT2G40440 BTB/POZ domain-containing protein -0.66 0.32 -0.29
14 AT4G18180 Pectin lyase-like superfamily protein 0.66 0.31 -0.32
15 AT3G28030 5'-3' exonuclease family protein ULTRAVIOLET HYPERSENSITIVE 3, UV
REPAIR DEFECTIVE 1		 -0.65 0.31 -0.31
16 AT3G51760 Protein of unknown function (DUF688) 0.65 0.29 -0.33
17 AT5G24440 CTC-interacting domain 13 CTC-interacting domain 13 -0.65 0.32 -0.33
18 AT1G19040 NAC (No Apical Meristem) domain transcriptional regulator
superfamily protein		 0.65 0.3 -0.31
19 AT1G46696 Protein of unknown function, DUF601 0.65 0.32 -0.31
20 AT5G09280 Pectin lyase-like superfamily protein -0.64 0.3 -0.31
21 AT3G04880 DNA-damage-repair/toleration protein (DRT102) DNA-DAMAGE-REPAIR/TOLERATION 2 0.64 0.31 -0.3
22 AT3G11620 alpha/beta-Hydrolases superfamily protein -0.64 0.31 -0.33
23 AT2G42930 Carbohydrate-binding X8 domain superfamily protein 0.64 0.32 -0.31
24 AT5G23270 sugar transporter 11 SUGAR TRANSPORTER 11, sugar
transporter 11		 0.64 0.31 -0.29
25 AT5G61920 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 6 plant structures;
EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal
differentiation and expansion stage, E expanded cotyledon
stage, D bilateral stage; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G67170.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 0.64 0.32 -0.29
26 AT3G33064 transposable element gene 0.64 0.33 -0.3
27 AT3G25210 Tetratricopeptide repeat (TPR)-like superfamily protein 0.63 0.32 -0.33
28 AT1G54280 ATPase E1-E2 type family protein / haloacid
dehalogenase-like hydrolase family protein		 -0.63 0.32 -0.29
29 AT3G56960 phosphatidyl inositol monophosphate 5 kinase 4 phosphatidyl inositol
monophosphate 5 kinase 4		 -0.63 0.32 -0.29
30 AT2G15325 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.63 0.31 -0.3
31 AT4G10540 Subtilase family protein 0.63 0.32 -0.3
32 AT3G19680 Protein of unknown function (DUF1005) 0.63 0.32 -0.33
33 AT5G25430 HCO3- transporter family 0.63 0.32 -0.29
34 AT5G60910 AGAMOUS-like 8 AGAMOUS-like 8, FRUITFULL 0.63 0.32 -0.3
35 AT1G22130 AGAMOUS-like 104 AGAMOUS-like 104 0.63 0.32 -0.31
36 AT2G15700 transposable element gene -0.63 0.33 -0.32
37 AT3G43680 transposable element gene 0.63 0.32 -0.3
38 AT5G29070 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: mitochondrion; BEST
Arabidopsis thaliana protein match is: zinc ion
binding;nucleic acid binding (TAIR:AT4G06479.1); Has 5
Blast hits to 5 proteins in 1 species: Archae - 0; Bacteria
- 0; Metazoa - 0; Fungi - 0; Plants - 5; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.62 0.32 -0.31
39 AT2G04300 Leucine-rich repeat protein kinase family protein 0.62 0.31 -0.31
40 AT2G41580 transposable element gene 0.62 0.31 -0.32
41 AT3G54060 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G37960.2); Has 455 Blast hits
to 322 proteins in 98 species: Archae - 0; Bacteria - 178;
Metazoa - 88; Fungi - 75; Plants - 28; Viruses - 2; Other
Eukaryotes - 84 (source: NCBI BLink).		 -0.62 0.3 -0.32
42 AT4G19780 transposable element gene -0.62 0.29 -0.31
43 AT1G62920 CONTAINS InterPro DOMAIN/s: Proteasome maturation factor
UMP1 (InterPro:IPR008012); BEST Arabidopsis thaliana
protein match is: Proteasome maturation factor UMP1
(TAIR:AT1G67250.1); Has 70 Blast hits to 70 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 70; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.62 0.31 -0.29
44 AT2G15440 Protein of unknown function (DUF579) -0.62 0.3 -0.3
45 AT1G50250 FTSH protease 1 FTSH protease 1 -0.62 0.31 -0.3
46 AT3G09320 DHHC-type zinc finger family protein 0.62 0.3 -0.34
47 AT1G43840 transposable element gene 0.62 0.34 -0.31
48 AT1G09570 phytochrome A FAR RED ELONGATED HYPOCOTYL 2, FAR
RED ELONGATED 1, ELONGATED
HYPOCOTYL 8, phytochrome A		 0.62 0.33 -0.31
49 AT1G68875 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: petal, leaf whorl,
sepal, flower, stamen; EXPRESSED DURING: 4 anthesis, petal
differentiation and expansion stage; Has 4 Blast hits to 4
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.61 0.35 -0.33
50 AT2G28840 XB3 ortholog 1 in Arabidopsis thaliana XB3 ortholog 1 in Arabidopsis
thaliana		 0.61 0.32 -0.3
51 AT3G56300 Cysteinyl-tRNA synthetase, class Ia family protein -0.61 0.32 -0.32
52 AT1G34240 transposable element gene -0.61 0.31 -0.3
53 AT3G11760 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 14 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G04860.1); Has 84 Blast hits to 73 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.61 0.31 -0.31
54 AT5G57520 zinc finger protein 2 ZINC FINGER PROTEIN 2, zinc finger
protein 2		 0.61 0.31 -0.31
55 AT2G07320 transposable element gene 0.61 0.3 -0.34
56 AT1G56030 RING/U-box superfamily protein -0.6 0.32 -0.31
57 AT1G49960 Xanthine/uracil permease family protein -0.6 0.29 -0.31
58 AT2G22320 unknown protein; Has 7 Blast hits to 7 proteins in 4
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.6 0.32 -0.31
59 AT2G13020 transposable element gene 0.6 0.31 -0.31
60 AT3G11690 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G06380.1); Has 84 Blast
hits to 84 proteins in 12 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.6 0.3 -0.31
61 AT5G38770 glutamine dumper 7 glutamine dumper 7, glutamine
dumper 7		 -0.6 0.31 -0.31
62 AT2G38780 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED
DURING: 13 growth stages; Has 58 Blast hits to 58 proteins
in 23 species: Archae - 0; Bacteria - 4; Metazoa - 1; Fungi
- 0; Plants - 44; Viruses - 0; Other Eukaryotes - 9
(source: NCBI BLink).		 -0.59 0.35 -0.3
63 AT4G02660 Beige/BEACH domain ;WD domain, G-beta repeat protein -0.59 0.3 -0.33
64 AT4G22780 ACT domain repeat 7 ACT domain repeat 7 0.59 0.3 -0.32
65 AT3G10720 Plant invertase/pectin methylesterase inhibitor superfamily 0.59 0.33 -0.3
66 AT4G09080 Outer membrane OMP85 family protein TRANSLOCON OUTER MEMBRANE COMPLEX
75-IV, translocon at the outer
envelope membrane of chloroplasts
75-IV		 0.59 0.29 -0.34
67 AT2G18350 homeobox protein 24 homeobox protein 24, homeobox
protein 24, ZINC FINGER
HOMEODOMAIN 6		 0.59 0.31 -0.3
68 AT3G03360 F-box/RNI-like superfamily protein -0.59 0.32 -0.31
69 AT1G72420 NADH:ubiquinone oxidoreductase intermediate-associated
protein 30		 -0.59 0.31 -0.3
70 AT2G01810 RING/FYVE/PHD zinc finger superfamily protein 0.59 0.31 -0.3
71 AT1G19485 Transducin/WD40 repeat-like superfamily protein -0.59 0.32 -0.32
72 AT4G18850 unknown protein; Has 6 Blast hits to 6 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.58 0.31 -0.29
73 AT3G23130 C2H2 and C2HC zinc fingers superfamily protein FLORAL DEFECTIVE 10, FLORAL ORGAN
NUMBER 1, SUPERMAN		 -0.58 0.31 -0.29
74 AT2G41120 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures;
EXPRESSED DURING: 10 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF309
(InterPro:IPR005500); Has 349 Blast hits to 349 proteins in
112 species: Archae - 2; Bacteria - 189; Metazoa - 0; Fungi
- 0; Plants - 31; Viruses - 0; Other Eukaryotes - 127
(source: NCBI BLink).		 -0.58 0.31 -0.32
75 AT4G19570 Chaperone DnaJ-domain superfamily protein -0.58 0.32 -0.3
76 AT5G42490 ATP binding microtubule motor family protein 0.58 0.31 -0.32
77 AT2G17640 Trimeric LpxA-like enzymes superfamily protein ATSERAT3;1, SERINE
ACETYLTRANSFERASE 106		 -0.58 0.34 -0.33
78 AT3G59440 Calcium-binding EF-hand family protein 0.58 0.32 -0.31
79 AT2G35030 Pentatricopeptide repeat (PPR) superfamily protein 0.58 0.31 -0.3
80 AT5G06265 hyaluronan mediated motility receptor-related -0.58 0.32 -0.33
81 AT1G34530 transposable element gene -0.57 0.3 -0.3
82 AT2G15240 UNC-50 family protein -0.57 0.32 -0.32
83 AT4G31280 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.57 0.31 -0.3
84 AT3G50320 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.57 0.32 -0.32
85 AT5G37140 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.57 0.3 -0.32
86 AT1G22860 Vacuolar sorting protein 39 -0.57 0.3 -0.31
87 AT5G63390 O-fucosyltransferase family protein -0.57 0.32 -0.32
88 AT2G11270 citrate synthase-related -0.57 0.3 -0.31
89 AT1G12120 Plant protein of unknown function (DUF863) 0.57 0.3 -0.3
90 AT5G13970 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G13310.1); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.57 0.32 -0.33
91 AT2G20550 HSP40/DnaJ peptide-binding protein 0.57 0.32 -0.3
92 AT1G38950 unknown protein; Has 0 Blast hits to 0 proteins in 0
species (source: NCBI BLink).		 -0.56 0.32 -0.31
93 AT1G64280 regulatory protein (NPR1) ARABIDOPSIS NONEXPRESSER OF PR
GENES 1, NON-INDUCIBLE IMMUNITY 1,
NONEXPRESSER OF PR GENES 1,
SALICYLIC ACID INSENSITIVE 1		 0.56 0.31 -0.31
94 AT1G34545 transposable element gene -0.56 0.33 -0.29
95 AT3G29390 RS2-interacting KH protein RS2-interacting KH protein -0.56 0.32 -0.32
96 AT1G31600 RNA-binding (RRM/RBD/RNP motifs) family protein Arabidopsis thaliana tRNA
methyltransferase 9, tRNA
methyltransferase 9		 -0.56 0.31 -0.33
97 AT4G05300 transposable element gene 0.56 0.33 -0.3
98 AT5G28240 transposable element gene 0.56 0.34 -0.31
99 AT4G22620 SAUR-like auxin-responsive protein family 0.56 0.29 -0.29
100 AT3G22700 F-box and associated interaction domains-containing protein 0.56 0.3 -0.3
101 AT2G24370 Protein kinase protein with adenine nucleotide alpha
hydrolases-like domain		 -0.56 0.31 -0.3
102 AT4G33180 alpha/beta-Hydrolases superfamily protein -0.56 0.32 -0.33
103 AT5G07430 Pectin lyase-like superfamily protein 0.56 0.31 -0.33
104 AT3G61010 Ferritin/ribonucleotide reductase-like family protein -0.56 0.3 -0.32
105 AT5G38140 nuclear factor Y, subunit C12 nuclear factor Y, subunit C12 -0.56 0.34 -0.32
106 AT3G17280 F-box and associated interaction domains-containing protein -0.55 0.3 -0.31
107 AT3G29792 transposable element gene -0.55 0.29 -0.31
108 AT5G59190 subtilase family protein -0.54 0.33 -0.31
109 AT1G63060 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: petal, leaf whorl, male
gametophyte, flower; EXPRESSED DURING: L mature pollen
stage, M germinated pollen stage, 4 anthesis, petal
differentiation and expansion stage; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G07330.1); Has 42 Blast hits to 42 proteins in 12
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.54 0.29 -0.32
110 AT5G43900 myosin 2 ARABIDOPSIS MYOSIN 2, myosin 2,
MYOSIN X1 2, MYOSIN XI-6		 -0.54 0.29 -0.33
111 AT1G56410 heat shock protein 70 (Hsp 70) family protein EARLY-RESPONSIVE TO DEHYDRATION 2,
HEAT SHOCK PROTEIN 70T-1		 -0.54 0.32 -0.32
112 AT3G15220 Protein kinase superfamily protein -0.54 0.33 -0.31
113 AT2G22160 Cysteine proteinases superfamily protein -0.54 0.32 -0.34
114 AT5G15380 domains rearranged methylase 1 domains rearranged methylase 1 -0.54 0.31 -0.32
115 AT3G26085 CAAX amino terminal protease family protein -0.53 0.31 -0.29
116 AT2G39280 Ypt/Rab-GAP domain of gyp1p superfamily protein -0.53 0.31 -0.31
117 AT2G05430 Ubiquitin-specific protease family C19-related protein -0.53 0.33 -0.29
118 AT2G36040 transposable element gene -0.53 0.32 -0.32
119 AT3G44030 pseudogene, similar to OSJNBb0043H09.1, blastp match of 40%
identity and 8.4e-38 P-value to
GP|21740634|emb|CAD40195.1||AL606611 OSJNBb0043H09.1 {Oryza
sativa (japonica cultivar-group)}		 -0.53 0.31 -0.33
120 AT4G29250 HXXXD-type acyl-transferase family protein -0.53 0.31 -0.3
121 AT1G44740 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: embryo, leaf whorl, flower,
seed; EXPRESSED DURING: F mature embryo stage, petal
differentiation and expansion stage, E expanded cotyledon
stage, D bilateral stage; Has 8 Blast hits to 7 proteins in
3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
1; Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.53 0.31 -0.29
122 AT2G04560 transferases, transferring glycosyl groups AtLpxB, lipid X B -0.53 0.32 -0.31
123 AT1G55990 glycine-rich protein -0.53 0.32 -0.31
124 AT3G44900 cation/H+ exchanger 4 cation/H+ exchanger 4, cation/H+
exchanger 4		 -0.53 0.33 -0.31
125 AT5G35390 Leucine-rich repeat protein kinase family protein -0.52 0.31 -0.28
126 AT1G23680 Domain of unknown function (DUF220) -0.52 0.31 -0.31
127 AT4G15755 Calcium-dependent lipid-binding (CaLB domain) family
protein		 -0.52 0.31 -0.32
128 AT3G28510 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.52 0.3 -0.31
129 AT1G72131 pseudogene of proton-dependent oligopeptide transporter -0.52 0.33 -0.34
130 AT5G57690 diacylglycerol kinase 4 ATDGK4, diacylglycerol kinase 4 -0.52 0.29 -0.33
131 AT4G28900 transposable element gene -0.52 0.32 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
132 C0205 Phosphatidylglycerol-34:3 - Phosphatidylglycerol-34:3 cardiolipin biosynthesis II,
linoleate biosynthesis I,
glycerophosphodiester degradation,
glutathione redox reactions I 		0.62 0.31 -0.34
133 C0152 Monogalactosyldiacylgycerol-34:5 - a Monogalactosyldiacylgycerol glycolipid biosynthesis,
triacylglycerol degradation,
linoleate biosynthesis I,
glutathione redox reactions I 		0.6 0.34 -0.31
134 C0246 Sulfoquinovosyldiacylglycerol-34:2 - Sulfoquinovosyldiacylglycerol sulfolipid biosynthesis 0.56 0.31 -0.35 C0246