AT1G75200 : -
Query Information
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AGICode AT1G75200
Description flavodoxin family protein / radical SAM domain-containing protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G75200 flavodoxin family protein / radical SAM domain-containing
protein		 1 0.31 -0.33
2 AT5G57870 MIF4G domain-containing protein / MA3 domain-containing
protein		 eukaryotic translation Initiation
Factor isoform 4G1		 0.89 0.32 -0.32
3 AT4G15770 RNA binding 0.88 0.33 -0.32
4 AT5G57990 ubiquitin-specific protease 23 ubiquitin-specific protease 23 0.87 0.31 -0.32
5 AT5G57280 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 root initiation defective 2 0.87 0.33 -0.33
6 AT5G61770 PETER PAN-like protein PETER PAN-like protein 0.87 0.32 -0.31
7 AT1G15740 Leucine-rich repeat family protein -0.86 0.32 -0.3
8 AT4G00090 Transducin/WD40 repeat-like superfamily protein 0.86 0.31 -0.33
9 AT4G28450 nucleotide binding;protein binding 0.86 0.3 -0.34
10 AT1G31660 CONTAINS InterPro DOMAIN/s: Bystin (InterPro:IPR007955);
Has 475 Blast hits to 467 proteins in 210 species: Archae -
0; Bacteria - 9; Metazoa - 155; Fungi - 139; Plants - 55;
Viruses - 0; Other Eukaryotes - 117 (source: NCBI BLink).		 0.86 0.33 -0.32
11 AT1G18850 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
nucleolus; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 40 Blast hits to 40 proteins
in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 40; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.86 0.35 -0.33
12 AT4G01560 Ribosomal RNA processing Brix domain protein maternal effect embryo arrest 49 0.85 0.31 -0.33
13 AT1G69250 Nuclear transport factor 2 (NTF2) family protein with RNA
binding (RRM-RBD-RNP motifs) domain		 0.85 0.32 -0.3
14 AT3G02320 N2,N2-dimethylguanosine tRNA methyltransferase 0.84 0.31 -0.3
15 AT1G55900 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 embryo defective 1860, TIM50 0.84 0.31 -0.31
16 AT1G80750 Ribosomal protein L30/L7 family protein 0.83 0.31 -0.3
17 AT2G04690 Pyridoxamine 5'-phosphate oxidase family protein -0.83 0.33 -0.29
18 AT3G23990 heat shock protein 60 heat shock protein 60, HEAT SHOCK
PROTEIN 60-3B		 0.83 0.3 -0.31
19 AT5G61780 TUDOR-SN protein 2 Arabidopsis thaliana TUDOR-SN
protein 2, TUDOR-SN protein 2,
TUDOR-SN protein 2		 0.83 0.31 -0.33
20 AT2G18900 Transducin/WD40 repeat-like superfamily protein 0.83 0.28 -0.29
21 AT1G02870 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Ribosome biogenesis protein Nop16
(InterPro:IPR019002); Has 104 Blast hits to 104 proteins in
57 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
63; Plants - 35; Viruses - 0; Other Eukaryotes - 6 (source:
NCBI BLink).		 0.83 0.32 -0.31
22 AT4G02220 zinc finger (MYND type) family protein / programmed cell
death 2 C-terminal domain-containing protein		 0.82 0.32 -0.31
23 AT2G25670 BEST Arabidopsis thaliana protein match is: copper ion
binding (TAIR:AT4G32610.1); Has 43784 Blast hits to 26928
proteins in 1799 species: Archae - 86; Bacteria - 6347;
Metazoa - 15971; Fungi - 5398; Plants - 1931; Viruses -
259; Other Eukaryotes - 13792 (source: NCBI BLink).		 0.82 0.32 -0.34
24 AT2G17670 Tetratricopeptide repeat (TPR)-like superfamily protein 0.82 0.31 -0.33
25 AT5G44320 Eukaryotic translation initiation factor 3 subunit 7
(eIF-3)		 0.82 0.3 -0.31
26 AT3G53520 UDP-glucuronic acid decarboxylase 1 ATUXS1, UDP-glucuronic acid
decarboxylase 1		 0.82 0.33 -0.33
27 AT3G51800 metallopeptidase M24 family protein A. THALIANA ERBB-3 BINDING PROTEIN
1, ATG2, ERBB-3 BINDING PROTEIN 1		 0.82 0.33 -0.31
28 AT2G44860 Ribosomal protein L24e family protein 0.82 0.32 -0.31
29 AT4G38710 glycine-rich protein 0.82 0.3 -0.31
30 AT3G46560 Tim10/DDP family zinc finger protein embryo defective 2474, TIM9 0.82 0.29 -0.32
31 AT3G55605 Mitochondrial glycoprotein family protein 0.82 0.31 -0.31
32 AT1G42440 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
ribosome biogenesis; LOCATED IN: nucleus; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: AARP2CN (InterPro:IPR012948),
Protein of unknown function DUF663 (InterPro:IPR007034);
BEST Arabidopsis thaliana protein match is: P-loop
containing nucleoside triphosphate hydrolases superfamily
protein (TAIR:AT1G06720.1); Has 2741 Blast hits to 2088
proteins in 291 species: Archae - 2; Bacteria - 131;
Metazoa - 833; Fungi - 650; Plants - 171; Viruses - 49;
Other Eukaryotes - 905 (source: NCBI BLink).		 0.82 0.3 -0.34
33 AT1G53645 hydroxyproline-rich glycoprotein family protein 0.82 0.35 -0.34
34 AT5G55920 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 OLIGOCELLULA 2 0.82 0.32 -0.3
35 AT3G25940 TFIIB zinc-binding protein 0.81 0.31 -0.31
36 AT1G48920 nucleolin like 1 nucleolin like 1, nucleolin like
1, PARALLEL 1		 0.81 0.32 -0.32
37 AT3G10530 Transducin/WD40 repeat-like superfamily protein 0.81 0.33 -0.32
38 AT1G75670 DNA-directed RNA polymerases 0.81 0.34 -0.34
39 AT4G31790 Tetrapyrrole (Corrin/Porphyrin) Methylases 0.81 0.34 -0.31
40 AT1G15420 CONTAINS InterPro DOMAIN/s: Small-subunit processome, Utp12
(InterPro:IPR007148); Has 764 Blast hits to 656 proteins in
193 species: Archae - 0; Bacteria - 42; Metazoa - 237;
Fungi - 154; Plants - 85; Viruses - 23; Other Eukaryotes -
223 (source: NCBI BLink).		 0.81 0.3 -0.32
41 AT3G52070 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 23 Blast hits to 23 proteins
in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.81 0.3 -0.28
42 AT5G22840 Protein kinase superfamily protein 0.81 0.29 -0.3
43 AT4G23540 ARM repeat superfamily protein 0.81 0.32 -0.32
44 AT5G64680 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
nucleolus; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; Has 114 Blast hits to 110
proteins in 37 species: Archae - 0; Bacteria - 0; Metazoa -
42; Fungi - 10; Plants - 37; Viruses - 0; Other Eukaryotes
- 25 (source: NCBI BLink).		 0.8 0.3 -0.3
45 AT1G10270 glutamine-rich protein 23 glutamine-rich protein 23 0.8 0.31 -0.31
46 AT1G29900 carbamoyl phosphate synthetase B carbamoyl phosphate synthetase B,
VENOSA 3		 0.8 0.32 -0.31
47 AT3G25545 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 38
Blast hits to 38 proteins in 14 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 38; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.8 0.34 -0.3
48 AT2G36530 Enolase ENOLASE 2, LOW EXPRESSION OF
OSMOTICALLY RESPONSIVE GENES 2		 0.8 0.31 -0.3
49 AT1G72440 CCAAT-binding factor embryo sac development arrest 25,
SLOW WALKER2		 0.8 0.33 -0.31
50 AT3G55620 Translation initiation factor IF6 eukaryotic initiation facor 6A,
embryo defective 1624		 0.8 0.3 -0.32
51 AT1G52930 Ribosomal RNA processing Brix domain protein 0.8 0.28 -0.3
52 AT2G19480 nucleosome assembly protein 1;2 nucleosome assembly protein 1;2,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR GROUP A 02,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR GROUP A 2		 0.8 0.29 -0.31
53 AT3G12270 protein arginine methyltransferase 3 ARABIDOPSIS THALIANA PROTEIN
ARGININE METHYLTRANSFERASE 3,
protein arginine methyltransferase
3		 0.8 0.3 -0.31
54 AT5G26710 Glutamyl/glutaminyl-tRNA synthetase, class Ic 0.8 0.31 -0.31
55 AT1G66070 Translation initiation factor eIF3 subunit 0.79 0.29 -0.31
56 AT1G13090 cytochrome P450, family 71, subfamily B, polypeptide 28 cytochrome P450, family 71,
subfamily B, polypeptide 28		 -0.79 0.3 -0.32
57 AT5G23050 acyl-activating enzyme 17 acyl-activating enzyme 17 -0.79 0.3 -0.31
58 AT4G04940 transducin family protein / WD-40 repeat family protein 0.79 0.3 -0.32
59 AT2G34357 ARM repeat superfamily protein 0.79 0.3 -0.34
60 AT1G04870 protein arginine methyltransferase 10 ATPRMT10, protein arginine
methyltransferase 10		 0.79 0.31 -0.33
61 AT2G18520 Tetratricopeptide repeat (TPR)-like superfamily protein 0.79 0.32 -0.33
62 AT2G24050 MIF4G domain-containing protein / MA3 domain-containing
protein		 eukaryotic translation Initiation
Factor isoform 4G2		 0.79 0.31 -0.31
63 AT2G34260 transducin family protein / WD-40 repeat family protein human WDR55 (WD40 repeat) homolog 0.79 0.32 -0.3
64 AT4G26780 Co-chaperone GrpE family protein AR192, mitochondrial GrpE 2 0.79 0.31 -0.33
65 AT4G29510 arginine methyltransferase 11 ARABIDOPSIS THALIANA ARGININE
METHYLTRANSFERASE 11, ARABIDOPSIS
THALIANA PROTEIN ARGININE
METHYLTRANSFERASE 1B, arginine
methyltransferase 11, PROTEIN
ARGININE METHYLTRANSFERASE 1B		 0.79 0.31 -0.31
66 AT3G22660 rRNA processing protein-related 0.79 0.32 -0.32
67 AT1G61640 Protein kinase superfamily protein 0.79 0.32 -0.32
68 AT5G62440 Protein of unknown function (DUF3223) 0.79 0.3 -0.33
69 AT4G39260 cold, circadian rhythm, and RNA binding 1 GLYCINE-RICH PROTEIN 8, cold,
circadian rhythm, and RNA binding
1, glycine-rich RNA-binding
protein 8, GRP8		 0.79 0.33 -0.34
70 AT3G11710 lysyl-tRNA synthetase 1 lysyl-tRNA synthetase 1 0.78 0.33 -0.34
71 AT5G41010 DNA directed RNA polymerase, 7 kDa subunit NRPB12, NRPD12, NRPE12 0.78 0.31 -0.32
72 AT4G36020 cold shock domain protein 1 cold shock domain protein 1 0.78 0.32 -0.33
73 AT3G52040 unknown protein; Has 37 Blast hits to 37 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.78 0.31 -0.3
74 AT1G04510 MOS4-associated complex 3A MOS4-associated complex 3A 0.78 0.29 -0.3
75 AT3G19130 RNA-binding protein 47B RNA-binding protein 47B,
RNA-binding protein 47B		 0.78 0.33 -0.32
76 AT1G43860 sequence-specific DNA binding transcription factors 0.78 0.3 -0.32
77 AT1G30500 nuclear factor Y, subunit A7 nuclear factor Y, subunit A7 -0.78 0.31 -0.32
78 AT2G44510 CDK inhibitor P21 binding protein 0.78 0.3 -0.31
79 AT1G01940 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family
protein		 0.78 0.3 -0.33
80 AT5G05210 Surfeit locus protein 6 0.77 0.3 -0.3
81 AT1G76160 SKU5 similar 5 SKU5 similar 5 0.77 0.33 -0.29
82 AT3G13860 heat shock protein 60-3A heat shock protein 60-3A 0.77 0.3 -0.31
83 AT3G04710 ankyrin repeat family protein tetratricopeptide repeat 10 0.77 0.32 -0.33
84 AT5G56950 nucleosome assembly protein 1;3 nucleosome assembly protein 1;3,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR GROUP A 03,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR GROUP A3		 0.77 0.33 -0.31
85 AT2G34970 Trimeric LpxA-like enzyme 0.77 0.31 -0.29
86 AT5G60960 Pentatricopeptide repeat (PPR) superfamily protein PPR protein localized to the
nucleus and mitochondria 1		 0.77 0.3 -0.33
87 AT2G32220 Ribosomal L27e protein family 0.77 0.32 -0.31
88 AT5G44110 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 ATP-binding cassette A21,
ARABIDOPSIS THALIANA NON-INTRINSIC
ABC PROTEIN, ATPOP1, POP1		 0.77 0.32 -0.31
89 AT5G06110 DnaJ domain ;Myb-like DNA-binding domain 0.77 0.32 -0.3
90 AT2G31240 Tetratricopeptide repeat (TPR)-like superfamily protein 0.77 0.31 -0.31
91 AT5G10010 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
nucleolus; EXPRESSED IN: 25 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G64910.1); Has 33260
Blast hits to 16857 proteins in 1270 species: Archae - 88;
Bacteria - 3040; Metazoa - 11915; Fungi - 3137; Plants -
1371; Viruses - 424; Other Eukaryotes - 13285 (source: NCBI
BLink).		 0.77 0.3 -0.3
92 AT1G26670 Vesicle transport v-SNARE family protein ATVTI12, VESICAL TRANSPORT V-SNARE
12, VTI1B		 -0.76 0.33 -0.32
93 AT1G79380 Ca(2)-dependent phospholipid-binding protein (Copine)
family		 -0.75 0.31 -0.32
94 AT4G22200 potassium transport 2/3 AKT2, potassium transport 2/3,
AKT3, potassium transport 2/3		 -0.75 0.32 -0.32
95 AT1G22370 UDP-glucosyl transferase 85A5 UDP-glucosyl transferase 85A5,
UDP-glucosyl transferase 85A5		 -0.74 0.3 -0.34
96 AT5G16800 Acyl-CoA N-acyltransferases (NAT) superfamily protein -0.74 0.29 -0.33
97 AT1G73920 alpha/beta-Hydrolases superfamily protein -0.74 0.32 -0.31
98 AT5G52880 F-box family protein -0.74 0.31 -0.32
99 AT3G51830 SAC domain-containing protein 8 ATG5, SAC domain-containing
protein 8		 -0.73 0.32 -0.3
100 AT3G10940 dual specificity protein phosphatase (DsPTP1) family
protein		 LIKE SEX4 2 -0.73 0.34 -0.31
101 AT3G53950 glyoxal oxidase-related protein -0.73 0.32 -0.32
102 AT3G26580 Tetratricopeptide repeat (TPR)-like superfamily protein -0.73 0.31 -0.3
103 AT1G76110 HMG (high mobility group) box protein with ARID/BRIGHT
DNA-binding domain		 -0.72 0.33 -0.32
104 AT4G33960 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 20 plant structures;
EXPRESSED DURING: 10 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT2G15830.1); Has 32 Blast hits to 32 proteins in 4
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.71 0.31 -0.31
105 AT1G30260 BEST Arabidopsis thaliana protein match is:
Galactosyltransferase family protein (TAIR:AT4G21060.1);
Has 30 Blast hits to 30 proteins in 8 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.71 0.34 -0.33
106 AT2G25590 Plant Tudor-like protein -0.7 0.3 -0.35
107 AT1G04350 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.7 0.31 -0.33
108 AT5G63200 tetratricopeptide repeat (TPR)-containing protein -0.69 0.32 -0.29
109 AT5G54980 Uncharacterised protein family (UPF0497) -0.69 0.34 -0.31
110 AT3G20420 RNAse THREE-like protein 2 RNASEIII-LIKE 2, RNAse THREE-like
protein 2		 -0.69 0.3 -0.32
111 AT5G16490 ROP-interactive CRIB motif-containing protein 4 ROP-interactive CRIB
motif-containing protein 4		 -0.69 0.33 -0.3
112 AT3G23610 dual specificity protein phosphatase 1 dual specificity protein
phosphatase 1		 -0.69 0.3 -0.33
113 AT4G29070 Phospholipase A2 family protein -0.68 0.33 -0.31
114 AT3G23080 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 -0.68 0.32 -0.34
115 AT4G34480 O-Glycosyl hydrolases family 17 protein -0.67 0.31 -0.34
116 AT5G25630 Tetratricopeptide repeat (TPR)-like superfamily protein -0.67 0.31 -0.3
117 AT1G71480 Nuclear transport factor 2 (NTF2) family protein -0.67 0.33 -0.3
118 AT3G16700 Fumarylacetoacetate (FAA) hydrolase family -0.67 0.3 -0.32
119 AT3G26890 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G41110.1); Has 393 Blast hits
to 383 proteins in 134 species: Archae - 0; Bacteria - 61;
Metazoa - 171; Fungi - 74; Plants - 80; Viruses - 0; Other
Eukaryotes - 7 (source: NCBI BLink).		 -0.67 0.31 -0.34
120 AT1G12680 phosphoenolpyruvate carboxylase-related kinase 2 phosphoenolpyruvate
carboxylase-related kinase 2		 -0.67 0.33 -0.32
121 AT5G66880 sucrose nonfermenting 1(SNF1)-related protein kinase 2.3 SUCROSE NONFERMENTING 1
(SNF1)-RELATED PROTEIN KINASE 2-3,
sucrose nonfermenting
1(SNF1)-related protein kinase
2.3, SRK2I		 -0.66 0.32 -0.33
122 AT1G63740 Disease resistance protein (TIR-NBS-LRR class) family -0.66 0.32 -0.31
123 AT5G51290 Diacylglycerol kinase family protein -0.66 0.33 -0.3
124 AT1G68540 NAD(P)-binding Rossmann-fold superfamily protein cinnamoyl coA reductase-like 6,
tetraketide alpha-pyrone reductase
2		 -0.66 0.31 -0.31
125 AT4G01280 Homeodomain-like superfamily protein -0.65 0.3 -0.31
126 AT3G17700 cyclic nucleotide-binding transporter 1 CYCLIC NUCLEOTIDE-GATED CHANNEL
20, cyclic nucleotide-binding
transporter 1, CNGC20		 -0.65 0.32 -0.31
127 AT5G01770 HEAT repeat ;WD domain, G-beta repeat protein protein ATRAPTOR1A, RAPTOR1A, RAPTOR2 -0.65 0.31 -0.32
128 AT1G53170 ethylene response factor 8 ATERF-8, ETHYLENE RESPONSE ELEMENT
BINDING FACTOR 4, ethylene
response factor 8		 -0.65 0.33 -0.31
129 AT5G02020 Encodes a protein involved in salt tolerance, names SIS
(Salt Induced Serine rich).		 Salt Induced Serine rich -0.65 0.31 -0.3
130 AT5G58120 Disease resistance protein (TIR-NBS-LRR class) family -0.65 0.36 -0.3
131 AT5G25280 serine-rich protein-related -0.65 0.32 -0.34
132 AT2G22310 ubiquitin-specific protease 4 ubiquitin-specific protease 4,
ubiquitin-specific protease 4		 -0.64 0.31 -0.32
133 AT2G35950 embryo sac development arrest 12 embryo sac development arrest 12 -0.64 0.31 -0.33
134 AT2G01400 unknown protein; Has 19 Blast hits to 19 proteins in 6
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.63 0.31 -0.31
135 AT1G54230 Winged helix-turn-helix transcription repressor DNA-binding -0.63 0.32 -0.33
136 AT1G17790 DNA-binding bromodomain-containing protein -0.62 0.34 -0.32
137 AT3G59530 Calcium-dependent phosphotriesterase superfamily protein LESS ADHERENT POLLEN 3 -0.62 0.31 -0.3
138 AT2G03530 ureide permease 2 ARABIDOPSIS THALIANA UREIDE
PERMEASE 2, ureide permease 2		 -0.62 0.3 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
139 C0003 α-Tocopherol - alpha-Tocopherol vitamin E biosynthesis -0.82 0.44 -0.47 C0003
140 C0097 Glucosamine-6-phosphate D-Glucosamine-6-phosphate D-Glucosamine-6-phosphate UDP-N-acetyl-D-glucosamine biosynthesis II -0.63 0.32 -0.33 C0097