AGICode | AT1G33390 |
Description | RNA helicase family protein |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT1G33390 | RNA helicase family protein | FASCIATED STEM 4, FASCIATED STEM 4 | 1 | 0.31 | -0.32 | ||
2 | AT1G14850 | nucleoporin 155 | nucleoporin 155 | 0.74 | 0.29 | -0.34 | ||
3 | AT1G30240 | FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); Has 165 Blast hits to 164 proteins in 73 species: Archae - 0; Bacteria - 0; Metazoa - 47; Fungi - 68; Plants - 46; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). |
0.74 | 0.32 | -0.33 | |||
4 | AT3G49240 | Pentatricopeptide repeat (PPR) superfamily protein | embryo defective 1796 | 0.73 | 0.34 | -0.33 | ||
5 | AT5G52380 | VASCULAR-RELATED NAC-DOMAIN 6 | 0.7 | 0.29 | -0.33 | |||
6 | AT3G05130 | BEST Arabidopsis thaliana protein match is: Prefoldin chaperone subunit family protein (TAIR:AT5G27330.1); Has 171032 Blast hits to 82560 proteins in 3364 species: Archae - 2835; Bacteria - 33550; Metazoa - 71995; Fungi - 13365; Plants - 9598; Viruses - 592; Other Eukaryotes - 39097 (source: NCBI BLink). |
0.68 | 0.31 | -0.31 | |||
7 | AT1G64600 | methyltransferases;copper ion binding | 0.68 | 0.3 | -0.3 | |||
8 | AT4G24200 | Transcription elongation factor (TFIIS) family protein | 0.67 | 0.3 | -0.35 | |||
9 | AT3G44850 | Protein kinase superfamily protein | 0.66 | 0.3 | -0.31 | |||
10 | AT1G09320 | agenet domain-containing protein | 0.65 | 0.33 | -0.32 | |||
11 | AT5G13740 | zinc induced facilitator 1 | zinc induced facilitator 1 | -0.65 | 0.3 | -0.29 | ||
12 | AT2G27960 | cyclin-dependent kinase-subunit 1 | cyclin-dependent kinase-subunit 1, CKS1AT |
-0.65 | 0.31 | -0.31 | ||
13 | AT5G53110 | RING/U-box superfamily protein | 0.64 | 0.31 | -0.31 | |||
14 | AT1G54680 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G27290.1); Has 200 Blast hits to 200 proteins in 57 species: Archae - 0; Bacteria - 59; Metazoa - 0; Fungi - 0; Plants - 127; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). |
-0.64 | 0.3 | -0.33 | |||
15 | AT2G39200 | Seven transmembrane MLO family protein | MILDEW RESISTANCE LOCUS O 12, MILDEW RESISTANCE LOCUS O 12 |
0.64 | 0.31 | -0.31 | ||
16 | AT5G47400 | unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.64 | 0.31 | -0.32 | |||
17 | AT5G13680 | IKI3 family protein | ABA-OVERLY SENSITIVE 1, AtELP1, ELONGATA 2 |
0.64 | 0.33 | -0.3 | ||
18 | AT1G47330 | CBS domain-containing protein with a domain of unknown function (DUF21) |
-0.63 | 0.34 | -0.29 | |||
19 | AT4G16770 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
-0.63 | 0.3 | -0.34 | |||
20 | AT1G69370 | chorismate mutase 3 | cm-3, chorismate mutase 3 | -0.63 | 0.3 | -0.31 | ||
21 | AT5G48810 | cytochrome B5 isoform D | ATB5-B, ARABIDOPSIS CYTOCHROME B5 ISOFORM D, B5 #3, cytochrome B5 isoform D |
-0.62 | 0.31 | -0.33 | ||
22 | AT1G71420 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.62 | 0.33 | -0.31 | |||
23 | AT4G17486 | PPPDE putative thiol peptidase family protein | -0.62 | 0.32 | -0.3 | |||
24 | AT3G51670 | SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein |
-0.61 | 0.33 | -0.34 | |||
25 | AT5G62950 | RNA polymerase II, Rpb4, core protein | -0.61 | 0.33 | -0.32 | |||
26 | AT2G31650 | homologue of trithorax | homologue of trithorax, SET DOMAIN PROTEIN 27 |
0.61 | 0.32 | -0.32 | ||
27 | AT4G19191 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.61 | 0.32 | -0.29 | |||
28 | AT3G11730 | Ras-related small GTP-binding family protein | ATFP8, ARABIDOPSIS THALIANA RAB GTPASE HOMOLOG D1, RAB GTPASE HOMOLOG D1 |
-0.6 | 0.32 | -0.32 | ||
29 | AT5G12310 | RING/U-box superfamily protein | -0.6 | 0.31 | -0.31 | |||
30 | AT5G26210 | alfin-like 4 | alfin-like 4 | -0.59 | 0.31 | -0.31 | ||
31 | AT3G22250 | UDP-Glycosyltransferase superfamily protein | -0.59 | 0.33 | -0.34 | |||
32 | AT3G18295 | Protein of unknown function (DUF1639) | -0.59 | 0.33 | -0.32 | |||
33 | AT1G53060 | Legume lectin family protein | -0.59 | 0.32 | -0.31 | |||
34 | AT5G03440 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G54880.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.58 | 0.33 | -0.33 | |||
35 | AT1G22050 | membrane-anchored ubiquitin-fold protein 6 precursor | membrane-anchored ubiquitin-fold protein 6 precursor |
-0.58 | 0.31 | -0.31 | ||
36 | AT3G02700 | NC domain-containing protein-related | -0.57 | 0.31 | -0.32 | |||
37 | AT4G29530 | Pyridoxal phosphate phosphatase-related protein | -0.57 | 0.32 | -0.33 | |||
38 | AT1G14290 | sphingoid base hydroxylase 2 | sphingoid base hydroxylase 2 | -0.57 | 0.33 | -0.31 | ||
39 | AT1G17330 | Metal-dependent phosphohydrolase | -0.57 | 0.31 | -0.28 | |||
40 | AT5G44060 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G04000.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.57 | 0.3 | -0.3 | |||
41 | ATMG00680 | hypothetical protein | ORF122C | -0.57 | 0.32 | -0.33 | ||
42 | AT3G22220 | hAT transposon superfamily | -0.56 | 0.34 | -0.32 | |||
43 | AT3G50750 | BES1/BZR1 homolog 1 | BES1/BZR1 homolog 1 | -0.55 | 0.31 | -0.32 | ||
44 | AT1G32020 | F-box family protein | -0.54 | 0.32 | -0.32 | |||
45 | AT2G05590 | TLD-domain containing nucleolar protein | -0.54 | 0.32 | -0.3 | |||
46 | AT1G31520 | unknown protein; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.53 | 0.33 | -0.33 | |||
47 | AT5G27430 | Signal peptidase subunit | -0.53 | 0.32 | -0.31 | |||
48 | AT1G33475 | SNARE-like superfamily protein | -0.53 | 0.33 | -0.3 | |||
49 | AT4G30760 | Putative endonuclease or glycosyl hydrolase | -0.53 | 0.32 | -0.31 | |||
50 | AT5G40190 | RNA ligase/cyclic nucleotide phosphodiesterase family protein |
-0.53 | 0.33 | -0.32 | |||
51 | AT3G47050 | Glycosyl hydrolase family protein | -0.53 | 0.32 | -0.3 |