AGICode | AT1G33350 |
Description | Pentatricopeptide repeat (PPR) superfamily protein |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT1G33350 | Pentatricopeptide repeat (PPR) superfamily protein | 1 | 0.32 | -0.32 | |||
2 | AT4G21130 | Transducin/WD40 repeat-like superfamily protein | EMBRYO DEFECTIVE 2271 | -0.68 | 0.32 | -0.3 | ||
3 | AT5G43550 | F-box associated ubiquitination effector family protein | 0.66 | 0.3 | -0.31 | |||
4 | AT4G23950 | Galactose-binding protein | 0.65 | 0.3 | -0.3 | |||
5 | AT5G52360 | actin depolymerizing factor 10 | actin depolymerizing factor 10 | -0.64 | 0.29 | -0.32 | ||
6 | AT1G33460 | transposable element gene | -0.64 | 0.31 | -0.32 | |||
7 | AT2G15790 | peptidyl-prolyl cis-trans isomerase / cyclophilin-40 (CYP40) / rotamase |
CYCLOPHILIN 40, SQUINT | -0.64 | 0.33 | -0.3 | ||
8 | AT1G50340 | Plant invertase/pectin methylesterase inhibitor superfamily protein |
0.64 | 0.29 | -0.32 | |||
9 | AT1G79660 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G16170.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.63 | 0.32 | -0.32 | |||
10 | AT5G03250 | Phototropic-responsive NPH3 family protein | 0.63 | 0.32 | -0.3 | |||
11 | AT2G19630 | F-box and associated interaction domains-containing protein | 0.63 | 0.31 | -0.31 | |||
12 | AT2G02670 | pseudogene, hypothetical protein | 0.63 | 0.33 | -0.3 | |||
13 | AT2G24840 | AGAMOUS-like 61 | AGAMOUS-like 61, DIANA | -0.63 | 0.32 | -0.31 | ||
14 | AT5G64180 | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.62 | 0.32 | -0.32 | |||
15 | AT5G53080 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.62 | 0.3 | -0.3 | |||
16 | AT1G05740 | Eukaryotic protein of unknown function (DUF842) | -0.61 | 0.3 | -0.32 | |||
17 | AT5G47360 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.61 | 0.32 | -0.32 | |||
18 | AT4G37780 | myb domain protein 87 | ATMYB87, myb domain protein 87 | -0.61 | 0.31 | -0.34 | ||
19 | AT1G29600 | Zinc finger C-x8-C-x5-C-x3-H type family protein | -0.61 | 0.33 | -0.29 | |||
20 | AT2G34320 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein |
-0.6 | 0.34 | -0.33 | |||
21 | AT5G67020 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G50340.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.6 | 0.33 | -0.3 | |||
22 | AT5G20330 | beta-1,3-glucanase 4 | beta-1,3-glucanase 4 | 0.6 | 0.33 | -0.3 | ||
23 | AT3G51360 | Eukaryotic aspartyl protease family protein | 0.6 | 0.32 | -0.32 | |||
24 | AT3G44900 | cation/H+ exchanger 4 | cation/H+ exchanger 4, cation/H+ exchanger 4 |
0.6 | 0.3 | -0.31 | ||
25 | AT4G11480 | cysteine-rich RLK (RECEPTOR-like protein kinase) 32 | cysteine-rich RLK (RECEPTOR-like protein kinase) 32 |
0.59 | 0.32 | -0.28 | ||
26 | AT2G29790 | Maternally expressed gene (MEG) family protein | -0.59 | 0.33 | -0.32 | |||
27 | AT4G15890 | binding | 0.59 | 0.28 | -0.32 | |||
28 | AT1G12260 | NAC 007 | NAC 007, EMBRYO DEFECTIVE 2749, NAC 007, VASCULAR RELATED NAC-DOMAIN PROTEIN 4 |
0.59 | 0.32 | -0.32 | ||
29 | AT4G00800 | transducin family protein / WD-40 repeat family protein | SETH5 | 0.59 | 0.3 | -0.3 | ||
30 | AT3G15605 | nucleic acid binding | 0.58 | 0.32 | -0.32 | |||
31 | AT1G09155 | phloem protein 2-B15 | phloem protein 2-B15, phloem protein 2-B15 |
-0.58 | 0.31 | -0.32 | ||
32 | AT1G06990 | GDSL-like Lipase/Acylhydrolase superfamily protein | 0.57 | 0.32 | -0.34 | |||
33 | AT5G47260 | ATP binding;GTP binding;nucleotide binding;nucleoside-triphosphatases |
-0.57 | 0.35 | -0.3 | |||
34 | AT2G17940 | Plant protein of unknown function (DUF827) | 0.57 | 0.32 | -0.31 | |||
35 | AT5G47970 | Aldolase-type TIM barrel family protein | 0.57 | 0.32 | -0.3 | |||
36 | AT5G44770 | Cysteine/Histidine-rich C1 domain family protein | 0.56 | 0.33 | -0.31 | |||
37 | AT1G69500 | cytochrome P450, family 704, subfamily B, polypeptide 1 | cytochrome P450, family 704, subfamily B, polypeptide 1 |
-0.56 | 0.31 | -0.35 | ||
38 | AT3G04220 | Disease resistance protein (TIR-NBS-LRR class) family | 0.56 | 0.28 | -0.31 | |||
39 | AT3G43500 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G42080.1); Has 8 Blast hits to 8 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 8; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.56 | 0.33 | -0.29 | |||
40 | AT4G32540 | Flavin-binding monooxygenase family protein | YUCCA, YUCCA 1 | -0.56 | 0.29 | -0.32 | ||
41 | AT4G30440 | UDP-D-glucuronate 4-epimerase 1 | UDP-D-glucuronate 4-epimerase 1 | -0.56 | 0.3 | -0.32 | ||
42 | AT1G63900 | E3 Ubiquitin ligase family protein | DIAP1-like protein 1 | -0.55 | 0.3 | -0.31 | ||
43 | AT5G12430 | Heat shock protein DnaJ with tetratricopeptide repeat | tetratricopeptide repeat 16 | 0.55 | 0.32 | -0.33 | ||
44 | AT1G12180 | BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT5G47600.1); Has 8 Blast hits to 8 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 8; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.55 | 0.33 | -0.33 | |||
45 | AT1G74740 | calcium-dependent protein kinase 30 | ATCPK30, CALCIUM-DEPENDENT PROTEIN KINASE 1A, calcium-dependent protein kinase 30 |
-0.55 | 0.31 | -0.32 | ||
46 | AT1G33910 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
-0.55 | 0.32 | -0.33 | |||
47 | AT5G62310 | AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein |
INCOMPLETE ROOT HAIR ELONGATION | -0.54 | 0.3 | -0.33 | ||
48 | AT1G17580 | myosin 1 | ARABIDOPSIS MYOSIN 1, myosin 1, MYOSIN XI 1 |
0.54 | 0.33 | -0.32 | ||
49 | AT5G59120 | subtilase 4.13 | subtilase 4.13, subtilase 4.13 | -0.54 | 0.32 | -0.32 | ||
50 | AT2G14800 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G44713.1); Has 41 Blast hits to 38 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 2; Plants - 16; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). |
0.54 | 0.33 | -0.31 | |||
51 | AT4G10510 | Subtilase family protein | 0.53 | 0.31 | -0.31 | |||
52 | AT1G48640 | Transmembrane amino acid transporter family protein | -0.53 | 0.34 | -0.32 | |||
53 | AT5G07000 | sulfotransferase 2B | ARABIDOPSIS THALIANA SULFOTRANSFERASE 2B, sulfotransferase 2B |
-0.53 | 0.3 | -0.31 | ||
54 | AT2G29620 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G07330.1); Has 887 Blast hits to 750 proteins in 151 species: Archae - 2; Bacteria - 63; Metazoa - 270; Fungi - 51; Plants - 111; Viruses - 6; Other Eukaryotes - 384 (source: NCBI BLink). |
-0.53 | 0.31 | -0.32 | |||
55 | AT5G48710 | Ubiquitin-like superfamily protein | -0.53 | 0.34 | -0.31 | |||
56 | AT2G33690 | Late embryogenesis abundant protein, group 6 | 0.53 | 0.3 | -0.31 | |||
57 | AT2G10500 | transposable element gene | -0.52 | 0.32 | -0.3 | |||
58 | AT3G30440 | transposable element gene | -0.52 | 0.3 | -0.33 | |||
59 | AT2G03840 | tetraspanin13 | tetraspanin13 | -0.52 | 0.29 | -0.34 | ||
60 | AT4G13240 | RHO guanyl-nucleotide exchange factor 9 | ATROPGEF9, RHO guanyl-nucleotide exchange factor 9 |
0.52 | 0.32 | -0.33 | ||
61 | AT5G26630 | MADS-box transcription factor family protein | -0.52 | 0.34 | -0.31 | |||
62 | AT5G28420 | Pentatricopeptide repeat (PPR) superfamily protein | -0.52 | 0.3 | -0.32 | |||
63 | AT4G05230 | Ubiquitin-like superfamily protein | 0.52 | 0.31 | -0.32 | |||
64 | AT1G61160 | CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.51 | 0.35 | -0.34 | |||
65 | AT1G54700 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Serine endopeptidase DegP2 (InterPro:IPR015724); BEST Arabidopsis thaliana protein match is: DegP protease 13 (TAIR:AT5G40560.1); Has 78 Blast hits to 78 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.51 | 0.31 | -0.33 | |||
66 | AT2G24930 | transposable element gene | -0.51 | 0.31 | -0.3 | |||
67 | AT3G23680 | F-box associated ubiquitination effector family protein | -0.5 | 0.32 | -0.34 | |||
68 | AT5G04480 | UDP-Glycosyltransferase superfamily protein | -0.5 | 0.32 | -0.33 | |||
69 | AT5G48655 | RING/U-box superfamily protein | -0.5 | 0.31 | -0.3 | |||
70 | AT3G22640 | cupin family protein | PAP85 | -0.5 | 0.3 | -0.28 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
71 | C0138 | Linarin | - | - | - | -0.64 | 0.46 | -0.43 |