AGICode | AT3G31380 |
Description | transposable element gene |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT3G31380 | transposable element gene | 1 | 0.32 | -0.32 | |||
2 | AT5G55790 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G45163.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.64 | 0.31 | -0.31 | |||
3 | AT1G43590 | transposable element gene | -0.62 | 0.33 | -0.32 | |||
4 | AT1G11630 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.6 | 0.34 | -0.3 | |||
5 | AT5G43410 | Integrase-type DNA-binding superfamily protein | 0.6 | 0.3 | -0.34 | |||
6 | AT1G33540 | serine carboxypeptidase-like 18 | serine carboxypeptidase-like 18 | -0.59 | 0.33 | -0.31 | ||
7 | AT5G47250 | LRR and NB-ARC domains-containing disease resistance protein |
0.59 | 0.3 | -0.3 | |||
8 | AT1G74810 | HCO3- transporter family | BOR5 | -0.58 | 0.31 | -0.32 | ||
9 | AT3G08700 | ubiquitin-conjugating enzyme 12 | ubiquitin-conjugating enzyme 12 | 0.58 | 0.32 | -0.32 | ||
10 | AT5G37450 | Leucine-rich repeat protein kinase family protein | -0.58 | 0.32 | -0.29 | |||
11 | AT3G26560 | ATP-dependent RNA helicase, putative | 0.58 | 0.33 | -0.31 | |||
12 | AT1G10880 | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
-0.58 | 0.31 | -0.33 | |||
13 | AT4G07480 | transposable element gene | -0.57 | 0.31 | -0.32 | |||
14 | AT5G56900 | CwfJ-like family protein / zinc finger (CCCH-type) family protein |
0.57 | 0.3 | -0.3 | |||
15 | AT1G68840 | related to ABI3/VP1 2 | AtRAV2, ETHYLENE RESPONSE DNA BINDING FACTOR 2, RELATED TO AP2 8, related to ABI3/VP1 2, TEMPRANILLO 2 |
-0.56 | 0.31 | -0.32 | ||
16 | AT1G48820 | Terpenoid cyclases/Protein prenyltransferases superfamily protein |
-0.56 | 0.31 | -0.29 | |||
17 | AT1G43980 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.56 | 0.31 | -0.33 | |||
18 | AT2G29080 | FTSH protease 3 | FTSH protease 3 | 0.55 | 0.32 | -0.32 | ||
19 | AT3G50610 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G66816.1); Has 125 Blast hits to 60 proteins in 16 species: Archae - 0; Bacteria - 2; Metazoa - 10; Fungi - 4; Plants - 97; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). |
-0.54 | 0.34 | -0.31 | |||
20 | AT5G26890 | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.54 | 0.33 | -0.32 | |||
21 | AT3G18660 | plant glycogenin-like starch initiation protein 1 | glucuronic acid substitution of xylan 1, plant glycogenin-like starch initiation protein 1 |
0.54 | 0.33 | -0.33 | ||
22 | AT2G23240 | Plant EC metallothionein-like protein, family 15 | Arabidopsis thaliana metallothionein 4b |
0.54 | 0.31 | -0.32 | ||
23 | AT2G16730 | glycosyl hydrolase family 35 protein | beta-galactosidase 13 | -0.54 | 0.32 | -0.33 | ||
24 | AT3G57840 | Plant self-incompatibility protein S1 family | -0.53 | 0.31 | -0.32 | |||
25 | AT2G04660 | anaphase-promoting complex/cyclosome 2 | anaphase-promoting complex/cyclosome 2 |
0.53 | 0.32 | -0.32 | ||
26 | AT3G57210 | Protein of unknown function (DUF626) | -0.53 | 0.33 | -0.33 | |||
27 | AT5G06070 | C2H2 and C2HC zinc fingers superfamily protein | RAB, RABBIT EARS | 0.53 | 0.31 | -0.33 | ||
28 | AT3G25600 | Calcium-binding EF-hand family protein | -0.52 | 0.33 | -0.33 | |||
29 | AT4G05250 | Ubiquitin-like superfamily protein | -0.52 | 0.32 | -0.32 | |||
30 | AT2G17270 | phosphate transporter 3;3 | phosphate transporter 3;3 | 0.52 | 0.3 | -0.31 | ||
31 | AT1G77780 | Glycosyl hydrolase superfamily protein | -0.51 | 0.33 | -0.34 | |||
32 | AT1G08730 | Myosin family protein with Dil domain | MYOSIN XI C, XIC | -0.51 | 0.31 | -0.3 | ||
33 | AT1G10000 | Ribonuclease H-like superfamily protein | 0.51 | 0.3 | -0.33 | |||
34 | AT5G64870 | SPFH/Band 7/PHB domain-containing membrane-associated protein family |
-0.51 | 0.32 | -0.31 | |||
35 | AT3G42900 | transposable element gene | -0.51 | 0.31 | -0.31 | |||
36 | AT3G42680 | transposable element gene | -0.51 | 0.33 | -0.33 | |||
37 | AT1G08210 | Eukaryotic aspartyl protease family protein | 0.51 | 0.31 | -0.32 | |||
38 | AT2G40790 | C-terminal cysteine residue is changed to a serine 2 | C-terminal cysteine residue is changed to a serine 2, C-terminal cysteine residue is changed to a serine 2 |
-0.5 | 0.31 | -0.3 | ||
39 | AT1G21850 | SKU5 similar 8 | SKU5 similar 8 | 0.5 | 0.32 | -0.31 | ||
40 | AT1G02680 | TBP-associated factor 13 | TBP-associated factor 13 | -0.5 | 0.34 | -0.33 | ||
41 | AT3G51190 | Ribosomal protein L2 family | 0.5 | 0.3 | -0.32 | |||
42 | AT4G30200 | vernalization5/VIN3-like | vernalization5/VIN3-like 1, VIN3-Like 2 |
0.5 | 0.31 | -0.3 | ||
43 | AT2G26720 | Cupredoxin superfamily protein | -0.5 | 0.3 | -0.31 | |||
44 | AT5G40750 | FBD / Leucine Rich Repeat domains containing protein | 0.5 | 0.31 | -0.31 | |||
45 | AT5G17320 | homeodomain GLABROUS 9 | homeodomain GLABROUS 9 | -0.5 | 0.33 | -0.3 | ||
46 | AT1G72740 | Homeodomain-like/winged-helix DNA-binding family protein | -0.5 | 0.31 | -0.32 | |||
47 | AT2G38280 | AMP deaminase, putative / myoadenylate deaminase, putative | ADENOSINE 5'-MONOPHOSPHATE DEAMINASE, EMBRYONIC FACTOR1 |
0.5 | 0.34 | -0.31 | ||
48 | AT3G53300 | cytochrome P450, family 71, subfamily B, polypeptide 31 | cytochrome P450, family 71, subfamily B, polypeptide 31 |
0.5 | 0.3 | -0.32 | ||
49 | ATMG00890 | hypothetical protein | ORF106D | 0.49 | 0.3 | -0.33 | ||
50 | AT3G32260 | Nucleic acid-binding proteins superfamily | -0.49 | 0.3 | -0.31 | |||
51 | AT3G60800 | DHHC-type zinc finger family protein | 0.49 | 0.31 | -0.31 | |||
52 | AT5G03590 | GDSL-like Lipase/Acylhydrolase superfamily protein | -0.49 | 0.32 | -0.3 | |||
53 | AT4G10070 | KH domain-containing protein | 0.49 | 0.31 | -0.32 | |||
54 | AT2G12990 | transposable element gene | 0.49 | 0.33 | -0.3 | |||
55 | AT3G18300 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G48780.1); Has 69 Blast hits to 69 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 69; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.48 | 0.31 | -0.3 | |||
56 | AT4G27660 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G54150.1); Has 115 Blast hits to 109 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 0; Plants - 100; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). |
-0.48 | 0.31 | -0.3 | |||
57 | AT1G55560 | SKU5 similar 14 | SKU5 similar 14 | 0.48 | 0.3 | -0.31 | ||
58 | AT3G43950 | Protein kinase superfamily protein | -0.48 | 0.32 | -0.32 | |||
59 | AT3G58790 | galacturonosyltransferase 15 | galacturonosyltransferase 15 | 0.48 | 0.31 | -0.32 | ||
60 | AT2G28270 | Cysteine/Histidine-rich C1 domain family protein | 0.47 | 0.32 | -0.31 | |||
61 | AT4G22160 | unknown protein; Has 42 Blast hits to 42 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.46 | 0.33 | -0.32 | |||
62 | AT1G70000 | myb-like transcription factor family protein | -0.46 | 0.34 | -0.33 | |||
63 | AT3G20760 | Nse4, component of Smc5/6 DNA repair complex | -0.46 | 0.34 | -0.31 | |||
64 | AT3G44250 | cytochrome P450, family 71, subfamily B, polypeptide 38 | cytochrome P450, family 71, subfamily B, polypeptide 38 |
-0.45 | 0.33 | -0.29 | ||
65 | AT2G07300 | transposable element gene | -0.45 | 0.31 | -0.34 | |||
66 | AT3G28155 | BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT2G35630.1); Has 19 Blast hits to 19 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.45 | 0.32 | -0.32 | |||
67 | AT3G01175 | Protein of unknown function (DUF1666) | -0.45 | 0.31 | -0.33 | |||
68 | AT2G16670 | transposable element gene | -0.45 | 0.32 | -0.31 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
69 | C0094 | Galactosamine | D-Galactosamine | - | - | 0.71 | 0.42 | -0.43 | ||
70 | C0087 | Erythrose-4-phosphate | D-Erythrose-4-phosphate | D-Erythrose-4-phosphate | Rubisco shunt, pentose phosphate pathway (non-oxidative branch), chorismate biosynthesis, Calvin-Benson-Bassham cycle |
0.67 | 0.43 | -0.48 | ||
71 | C0015 | p-Coumaric acid | - | 4-Coumarate | scopoletin biosynthesis, free phenylpropanoid acid biosynthesis, phenylpropanoid biosynthesis, simple coumarins biosynthesis, 4-hydroxybenzoate biosynthesis V, suberin biosynthesis, phenylpropanoid biosynthesis, initial reactions, flavonoid biosynthesis |
0.63 | 0.41 | -0.43 | ||
72 | C0052 | Adenosine | - | Adenosine | adenine and adenosine salvage VI, S-adenosyl-L-methionine cycle II, cytokinins degradation, methionine degradation I (to homocysteine), adenine and adenosine salvage II |
0.58 | 0.31 | -0.33 |