AT3G28720 : -
Query Information
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AGICode AT3G28720
Description unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G58100.1); Has 1610 Blast hits to 344 proteins in 85 species: Archae - 0; Bacteria - 567; Metazoa - 95; Fungi - 71; Plants - 145; Viruses - 0; Other Eukaryotes - 732 (source: NCBI BLink).
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G28720 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 25 plant
structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G58100.1); Has 1610 Blast hits to 344 proteins in
85 species: Archae - 0; Bacteria - 567; Metazoa - 95; Fungi
- 71; Plants - 145; Viruses - 0; Other Eukaryotes - 732
(source: NCBI BLink).		 1 0.32 -0.34
2 AT1G10950 transmembrane nine 1 AtTMN1, transmembrane nine 1 0.74 0.3 -0.33
3 AT3G04605 transposable element gene 0.73 0.31 -0.31
4 AT1G26460 Tetratricopeptide repeat (TPR)-like superfamily protein 0.72 0.3 -0.33
5 AT3G51880 high mobility group B1 AtHMGB1, high mobility group B1,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR D1		 -0.69 0.34 -0.34
6 AT3G19070 Homeodomain-like superfamily protein 0.68 0.31 -0.32
7 AT1G73240 CONTAINS InterPro DOMAIN/s: Nucleoporin protein Ndc1-Nup
(InterPro:IPR019049); Has 36 Blast hits to 36 proteins in
17 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi -
0; Plants - 35; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.67 0.31 -0.31
8 AT2G36920 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT4G02870.1); Has 13 Blast hits to 11
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 13; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.66 0.3 -0.32
9 AT1G17040 SH2 domain protein A ARABIDOPSIS THALIANA SH2 DOMAIN
PROTEIN A, SH2 domain protein A,
STAT-TYPE LINKER-SH2 DOMAIN FACTOR
A		 -0.66 0.32 -0.32
10 AT3G62360 Carbohydrate-binding-like fold 0.65 0.3 -0.33
11 AT4G38200 SEC7-like guanine nucleotide exchange family protein 0.65 0.3 -0.32
12 AT2G32980 unknown protein; Has 158 Blast hits to 154 proteins in 73
species: Archae - 0; Bacteria - 61; Metazoa - 0; Fungi - 0;
Plants - 55; Viruses - 28; Other Eukaryotes - 14 (source:
NCBI BLink).		 -0.65 0.29 -0.31
13 AT4G03750 transposable element gene 0.65 0.31 -0.33
14 AT5G14950 golgi alpha-mannosidase II ATGMII, golgi alpha-mannosidase II 0.64 0.29 -0.33
15 AT2G46520 cellular apoptosis susceptibility protein, putative /
importin-alpha re-exporter, putative		 0.64 0.32 -0.32
16 AT1G28327 unknown protein; Has 52 Blast hits to 52 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 52; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.64 0.32 -0.34
17 AT4G10030 alpha/beta-Hydrolases superfamily protein -0.64 0.31 -0.32
18 AT2G03520 ureide permease 4 ureide permease 4, ureide permease
4		 0.63 0.3 -0.34
19 AT1G10520 DNA polymerase lambda (POLL) AtPol{lambda}, DNA polymerase
{lambda}		 -0.63 0.34 -0.32
20 AT1G35647 transposable element gene -0.63 0.31 -0.32
21 AT2G02830 transposable element gene 0.63 0.31 -0.31
22 AT3G60860 SEC7-like guanine nucleotide exchange family protein 0.63 0.35 -0.32
23 AT2G14810 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.62 0.33 -0.31
24 AT2G44150 histone-lysine N-methyltransferase ASHH3 histone-lysine N-methyltransferase
ASHH3, SET DOMAIN-CONTAINING
PROTEIN 7		 -0.62 0.3 -0.32
25 AT5G25410 Protein of Unknown Function (DUF239) 0.62 0.32 -0.32
26 AT3G20550 SMAD/FHA domain-containing protein DAWDLE -0.62 0.32 -0.3
27 AT1G51700 DOF zinc finger protein 1 DOF zinc finger protein 1, DOF
zinc finger protein 1		 -0.62 0.32 -0.31
28 AT3G57650 lysophosphatidyl acyltransferase 2 lysophosphatidyl acyltransferase 2 0.61 0.3 -0.31
29 AT5G53840 F-box/RNI-like/FBD-like domains-containing protein -0.61 0.33 -0.33
30 AT2G40410 Staphylococcal nuclease homologue -0.61 0.3 -0.34
31 AT1G52420 UDP-Glycosyltransferase superfamily protein 0.61 0.29 -0.3
32 AT5G23630 phosphate deficiency response 2 MALE GAMETOGENESIS IMPAIRED
ANTHERS, phosphate deficiency
response 2, PI DEFICIENCY RESPONSE
2		 0.61 0.3 -0.31
33 AT5G13790 AGAMOUS-like 15 AGAMOUS-like 15 -0.61 0.31 -0.31
34 AT4G01920 Cysteine/Histidine-rich C1 domain family protein 0.61 0.32 -0.31
35 AT2G03450 purple acid phosphatase 9 PURPLE ACID PHOSPHATASE 9, purple
acid phosphatase 9		 0.61 0.31 -0.31
36 AT4G15200 formin 3 formin 3, formin 3 -0.6 0.32 -0.31
37 AT3G19790 unknown protein; Has 32 Blast hits to 26 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 13; Fungi - 2;
Plants - 14; Viruses - 0; Other Eukaryotes - 3 (source:
NCBI BLink).		 -0.6 0.3 -0.29
38 AT5G09780 Transcriptional factor B3 family protein 0.6 0.34 -0.32
39 AT3G62180 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 -0.6 0.32 -0.33
40 AT1G23640 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN:
petal, leaf whorl, sepal, flower; EXPRESSED DURING: 4
anthesis, petal differentiation and expansion stage;
CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF220 (InterPro:IPR003863); BEST Arabidopsis thaliana
protein match is: Domain of unknown function DUF220
(TAIR:AT1G23660.1); Has 270 Blast hits to 130 proteins in
12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 270; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.6 0.32 -0.33
41 AT2G16835 Aquaporin-like superfamily protein 0.59 0.33 -0.31
42 AT1G01960 SEC7-like guanine nucleotide exchange family protein embryo sac development arrest 10 0.59 0.31 -0.32
43 AT3G43420 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.59 0.32 -0.31
44 AT2G21970 stress enhanced protein 2 stress enhanced protein 2 -0.59 0.33 -0.31
45 AT1G50470 F-box associated ubiquitination effector family protein 0.59 0.32 -0.3
46 AT5G63135 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.59 0.3 -0.32
47 AT4G04470 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein PMP22 -0.59 0.31 -0.31
48 AT1G67370 DNA-binding HORMA family protein ASYNAPTIC 1, ATASY1 -0.58 0.31 -0.33
49 AT2G20030 RING/U-box superfamily protein 0.58 0.32 -0.3
50 AT5G38080 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G38090.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.58 0.31 -0.29
51 AT4G14385 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: vacuole; EXPRESSED
IN: 24 plant structures; EXPRESSED DURING: 15 growth
stages; CONTAINS InterPro DOMAIN/s: Histone H4
acetyltransferase, NuA4 complex, Eaf6 (InterPro:IPR015418);
Has 30201 Blast hits to 17322 proteins in 780 species:
Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi -
3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996
(source: NCBI BLink).		 -0.58 0.31 -0.29
52 AT1G21065 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Uncharacterised protein family UPF0047
(InterPro:IPR001602); Has 3800 Blast hits to 3784 proteins
in 1137 species: Archae - 215; Bacteria - 2154; Metazoa -
42; Fungi - 99; Plants - 99; Viruses - 0; Other Eukaryotes
- 1191 (source: NCBI BLink).		 -0.58 0.33 -0.32
53 AT1G80740 chromomethylase 1 chromomethylase 1, DNA
METHYLTRANSFERASE 4		 -0.58 0.34 -0.31
54 AT5G25840 Protein of unknown function (DUF1677) -0.57 0.32 -0.3
55 AT3G24360 ATP-dependent caseinolytic (Clp) protease/crotonase family
protein		 -0.57 0.31 -0.32
56 AT2G05980 transposable element gene 0.57 0.29 -0.29
57 AT5G38910 RmlC-like cupins superfamily protein 0.57 0.33 -0.3
58 AT1G23690 Domain of unknown function DUF220 -0.57 0.32 -0.3
59 AT3G13220 ABC-2 type transporter family protein ATP-binding cassette G26,
AtABCG26, MSR02, WBC27		 0.57 0.32 -0.3
60 AT5G19700 MATE efflux family protein 0.57 0.31 -0.31
61 AT5G29090 transposable element gene -0.57 0.33 -0.31
62 AT4G07540 transposable element gene -0.57 0.34 -0.33
63 AT4G33900 Galactose oxidase/kelch repeat superfamily protein -0.57 0.31 -0.32
64 AT3G56630 cytochrome P450, family 94, subfamily D, polypeptide 2 cytochrome P450, family 94,
subfamily D, polypeptide 2		 0.57 0.33 -0.31
65 AT4G29090 Ribonuclease H-like superfamily protein 0.57 0.31 -0.29
66 AT5G24280 gamma-irradiation and mitomycin c induced 1 GAMMA-IRRADIATION AND MITOMYCIN C
INDUCED 1		 0.57 0.31 -0.31
67 AT4G10925 Nuclear transport factor 2 (NTF2) family protein -0.57 0.3 -0.33
68 ATCG00330 chloroplast ribosomal protein S14 chloroplast ribosomal protein S14 -0.56 0.3 -0.32
69 AT2G31450 DNA glycosylase superfamily protein ATNTH1 -0.56 0.31 -0.31
70 AT2G13230 transposable element gene 0.56 0.32 -0.3
71 AT5G53480 ARM repeat superfamily protein 0.56 0.32 -0.32
72 AT1G27595 CONTAINS InterPro DOMAIN/s: Symplekin tight junction
protein C-terminal (InterPro:IPR022075); BEST Arabidopsis
thaliana protein match is: HEAT repeat-containing protein
(TAIR:AT5G01400.1); Has 593 Blast hits to 297 proteins in
111 species: Archae - 0; Bacteria - 3; Metazoa - 139; Fungi
- 49; Plants - 57; Viruses - 0; Other Eukaryotes - 345
(source: NCBI BLink).		 0.56 0.31 -0.33
73 AT1G43870 transposable element gene -0.56 0.31 -0.29
74 AT3G57220 Glycosyl transferase family 4 protein 0.55 0.31 -0.32
75 AT3G43920 dicer-like 3 DICER-LIKE 3, dicer-like 3 0.55 0.3 -0.29
76 AT3G32917 transposable element gene -0.55 0.34 -0.31
77 AT2G39060 Nodulin MtN3 family protein AtSWEET9, SWEET9 -0.55 0.32 -0.29
78 AT5G09500 Ribosomal protein S19 family protein 0.55 0.31 -0.32
79 AT3G24850 Domain of unknown function (DUF313) 0.54 0.33 -0.33
80 AT5G02840 LHY/CCA1-like 1 LHY/CCA1-like 1 -0.54 0.34 -0.3
81 AT2G11235 transposable element gene -0.54 0.31 -0.31
82 AT1G05880 RING/U-box superfamily protein ARIADNE 12, ARABIDOPSIS ARIADNE 12 -0.54 0.32 -0.32
83 AT1G50530 BEST Arabidopsis thaliana protein match is:
Calcium-dependent lipid-binding (CaLB domain) family
protein (TAIR:AT1G50570.2); Has 10 Blast hits to 10
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 10; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.54 0.31 -0.32
84 AT3G53080 D-galactoside/L-rhamnose binding SUEL lectin protein -0.54 0.35 -0.31
85 AT4G28670 Protein kinase family protein with domain of unknown
function (DUF26)		 -0.54 0.3 -0.31
86 AT3G50660 Cytochrome P450 superfamily protein CLOMAZONE-RESISTANT, CYTOCHROME
P450 90B1, DWARF 4, PARTIALLY
SUPPRESSING COI1 INSENSITIVITY TO
JA 1, SHADE AVOIDANCE 1,
SUPPRESSOR OF NPH4 2		 -0.54 0.35 -0.32
87 AT4G39756 Galactose oxidase/kelch repeat superfamily protein -0.54 0.33 -0.3
88 AT5G46770 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.54 0.31 -0.32
89 AT2G20170 Protein of Unknown Function (DUF239) 0.54 0.31 -0.32
90 AT2G09840 BEST Arabidopsis thaliana protein match is: nucleic acid
binding;zinc ion binding (TAIR:AT2G06904.1); Has 10 Blast
hits to 10 proteins in 1 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 10; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.53 0.32 -0.32
91 AT5G34895 transposable element gene -0.53 0.3 -0.29
92 AT5G27810 MADS-box transcription factor family protein -0.53 0.32 -0.3
93 AT2G25720 unknown protein; Has 38 Blast hits to 38 proteins in 18
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.53 0.33 -0.34
94 ATMG00140 hypothetical protein ORF167 -0.53 0.31 -0.3
95 AT1G61440 S-locus lectin protein kinase family protein -0.52 0.29 -0.31
96 AT5G37520 Protein of Unknown Function (DUF239) -0.52 0.34 -0.31
97 AT3G58530 RNI-like superfamily protein -0.52 0.32 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
98 C0012 n-Eicosanoic acid - Arachidate fatty acid activation,
fatty acid ω-oxidation,
sporopollenin precursor biosynthesis,
acyl-ACP thioesterase pathway,
ceramide degradation,
fatty acid α-oxidation,
fatty acid ω-oxidation,
phospholipases,
triacylglycerol degradation 		0.63 0.43 -0.43 C0012