AT3G28830 : -
Query Information
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AGICode AT3G28830
Description Protein of unknown function (DUF1216)
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G28830 Protein of unknown function (DUF1216) 1 0.34 -0.33
2 AT3G13130 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: male gametophyte; Has
140 Blast hits to 132 proteins in 41 species: Archae - 2;
Bacteria - 4; Metazoa - 29; Fungi - 20; Plants - 51;
Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink).		 0.66 0.3 -0.32
3 AT2G39550 Prenyltransferase family protein GERANYLGERANYLTRANSFERASE-I BETA
SUBUNIT, GGB, PGGT-I		 -0.65 0.31 -0.32
4 AT1G24340 FAD/NAD(P)-binding oxidoreductase family protein EMBRYO DEFECTIVE 2421, EMBRYO
DEFECTIVE 260		 -0.65 0.3 -0.31
5 AT3G18370 C2 domain-containing protein ATSYTF, NTMC2T3, NTMC2TYPE3, SYTF 0.65 0.31 -0.32
6 AT2G31870 Poly (ADP-ribose) glycohydrolase (PARG) poly(ADP-ribose) glycohydrolase 1,
Sanskrit for 'bright'		 0.64 0.31 -0.33
7 AT4G17770 trehalose phosphatase/synthase 5 trehalose phosphatase/synthase 5,
TREHALOSE -6-PHOSPHATASE SYNTHASE
S5, trehalose phosphatase/synthase
5		 0.63 0.3 -0.31
8 AT2G24160 pseudogene, leucine rich repeat protein family, contains
leucine rich-repeat domains Pfam:PF00560,
INTERPRO:IPR001611; contains some similarity to Cf-4
(Lycopersicon hirsutum) gi|2808683|emb|CAA05268; blastp
match of 37% identity and 8.4e-98 P-value to
GP|2808683|emb|CAA05268.1||AJ002235 Cf-4 {Lycopersicon
hirsutum}		 0.63 0.33 -0.32
9 AT3G45290 Seven transmembrane MLO family protein MILDEW RESISTANCE LOCUS O 3,
MILDEW RESISTANCE LOCUS O 3		 0.63 0.34 -0.3
10 AT2G20250 unknown protein; Has 10 Blast hits to 10 proteins in 6
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2;
Plants - 8; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.61 0.31 -0.32
11 AT3G12910 NAC (No Apical Meristem) domain transcriptional regulator
superfamily protein		 0.61 0.32 -0.28
12 AT1G49250 ATP-dependent DNA ligase -0.6 0.32 -0.32
13 AT5G64800 CLAVATA3/ESR-RELATED 21 CLAVATA3/ESR-RELATED 21 0.6 0.32 -0.35
14 AT4G33925 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 suppressor of sni1 2 0.59 0.33 -0.32
15 AT5G20390 Glycosyl hydrolase superfamily protein 0.58 0.33 -0.32
16 AT5G04310 Pectin lyase-like superfamily protein -0.58 0.31 -0.33
17 AT4G27110 COBRA-like protein 11 precursor COBRA-like protein 11 precursor 0.58 0.3 -0.3
18 AT3G29650 transposable element gene 0.58 0.3 -0.31
19 AT3G46970 alpha-glucan phosphorylase 2 Arabidopsis thaliana alpha-glucan
phosphorylase 2, alpha-glucan
phosphorylase 2		 0.57 0.32 -0.33
20 AT4G34110 poly(A) binding protein 2 ARABIDOPSIS POLY(A) BINDING 2,
poly(A) binding protein 2, POLY(A)
BINDING PROTEIN 2		 -0.57 0.31 -0.31
21 AT5G47080 casein kinase II beta chain 1 casein kinase II beta chain 1 -0.56 0.3 -0.32
22 AT1G23840 unknown protein; LOCATED IN: endomembrane system; EXPRESSED
IN: 18 plant structures; EXPRESSED DURING: 12 growth
stages; BEST Arabidopsis thaliana protein match is: unknown
protein (TAIR:AT1G23850.1); Has 53 Blast hits to 48
proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.56 0.31 -0.31
23 AT2G12990 transposable element gene -0.56 0.32 -0.31
24 AT3G57420 Protein of unknown function (DUF288) -0.56 0.31 -0.3
25 AT1G49490 Leucine-rich repeat (LRR) family protein -0.55 0.29 -0.32
26 AT4G25330 unknown protein; Has 21 Blast hits to 21 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.55 0.31 -0.32
27 AT1G09410 pentatricopeptide (PPR) repeat-containing protein -0.55 0.31 -0.32
28 AT2G18230 pyrophosphorylase 2 pyrophosphorylase 2,
pyrophosphorylase 2		 0.55 0.32 -0.32
29 AT4G04510 cysteine-rich RLK (RECEPTOR-like protein kinase) 38 cysteine-rich RLK (RECEPTOR-like
protein kinase) 38		 0.55 0.29 -0.3
30 AT5G66660 Protein of unknown function (DUF677) -0.55 0.34 -0.32
31 AT3G22640 cupin family protein PAP85 -0.55 0.33 -0.32
32 AT1G08270 CONTAINS InterPro DOMAIN/s: MIT (InterPro:IPR007330); BEST
Arabidopsis thaliana protein match is: AAA-type ATPase
family protein (TAIR:AT2G27600.1); Has 1133 Blast hits to
1133 proteins in 252 species: Archae - 47; Bacteria - 0;
Metazoa - 540; Fungi - 145; Plants - 223; Viruses - 0;
Other Eukaryotes - 178 (source: NCBI BLink).		 -0.54 0.33 -0.31
33 AT5G67200 Leucine-rich repeat protein kinase family protein 0.54 0.31 -0.3
34 AT4G13610 DNA (cytosine-5-)-methyltransferase family protein maternal effect embryo arrest 57 0.54 0.28 -0.32
35 AT4G38230 calcium-dependent protein kinase 26 ARABIDOPSIS THALIANA
CALCIUM-DEPENDENT PROTEIN KINASE
26, calcium-dependent protein
kinase 26		 0.54 0.32 -0.31
36 AT1G60280 NAC domain containing protein 23 NAC domain containing protein 23,
NAC domain containing protein 23		 0.54 0.33 -0.33
37 AT1G36110 transposable element gene -0.54 0.33 -0.31
38 AT2G14380 transposable element gene 0.53 0.33 -0.33
39 AT4G02490 transposable element gene -0.53 0.32 -0.34
40 AT1G64710 GroES-like zinc-binding dehydrogenase family protein 0.53 0.33 -0.31
41 AT2G45240 methionine aminopeptidase 1A methionine aminopeptidase 1A -0.53 0.3 -0.33
42 AT1G15350 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G15770.2); Has 148 Blast hits
to 148 proteins in 25 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 141; Viruses - 0; Other
Eukaryotes - 7 (source: NCBI BLink).		 -0.53 0.31 -0.31
43 AT3G49790 Carbohydrate-binding protein -0.53 0.31 -0.31
44 AT2G44050 6,7-dimethyl-8-ribityllumazine synthase / DMRL synthase /
lumazine synthase / riboflavin synthase		 COI1 SUPPRESSOR1, coronatine
insensitive1 suppressor		 -0.53 0.32 -0.32
45 AT5G53340 Galactosyltransferase family protein -0.52 0.33 -0.31
46 AT2G43900 Endonuclease/exonuclease/phosphatase family protein 0.52 0.29 -0.3
47 AT1G69660 TRAF-like family protein 0.52 0.32 -0.31
48 AT3G27290 RNI-like superfamily protein 0.51 0.31 -0.32
49 AT2G45380 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: inflorescence meristem, flower,
cultured cell; EXPRESSED DURING: petal differentiation and
expansion stage; BEST Arabidopsis thaliana protein match
is: Calcium-binding EF-hand family protein
(TAIR:AT4G34070.1); Has 171 Blast hits to 170 proteins in
31 species: Archae - 2; Bacteria - 0; Metazoa - 68; Fungi -
0; Plants - 94; Viruses - 0; Other Eukaryotes - 7 (source:
NCBI BLink).		 -0.51 0.32 -0.3
50 AT4G16840 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G35658.3); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.51 0.31 -0.33
51 AT2G10490 transposable element gene 0.51 0.3 -0.32
52 AT3G29732 transposable element gene 0.51 0.32 -0.31
53 AT1G70895 CLAVATA3/ESR-RELATED 17 CLAVATA3/ESR-RELATED 17 0.51 0.34 -0.3
54 AT1G19200 Protein of unknown function (DUF581) -0.5 0.32 -0.31
55 AT2G42860 unknown protein; Has 446 Blast hits to 326 proteins in 94
species: Archae - 0; Bacteria - 32; Metazoa - 113; Fungi -
93; Plants - 21; Viruses - 4; Other Eukaryotes - 183
(source: NCBI BLink).		 0.5 0.32 -0.3
56 AT1G71410 ARM repeat superfamily protein -0.5 0.31 -0.32
57 AT1G21830 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF740 (InterPro:IPR008004); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G44608.1); Has 49 Blast hits to 49 proteins in 12
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.5 0.3 -0.31
58 AT3G48030 hypoxia-responsive family protein / zinc finger (C3HC4-type
RING finger) family protein		 0.5 0.29 -0.32
59 AT1G32770 NAC domain containing protein 12 NAC domain containing protein 12,
NAC domain containing protein 12,
NAC SECONDARY WALL THICKENING
PROMOTING 3, SECONDARY
WALL-ASSOCIATED NAC DOMAIN 1		 0.49 0.31 -0.31
60 AT4G17245 RING/U-box superfamily protein -0.49 0.32 -0.34
61 AT5G51200 Protein of unknown function (DUF3414) EMBRYO DEFECTIVE 3142 0.49 0.31 -0.32
62 AT1G13220 nuclear matrix constituent protein-related CROWDED NUCLEI 2, LITTLE NUCLEI2 0.49 0.32 -0.33
63 AT2G38910 calcium-dependent protein kinase 20 calcium-dependent protein kinase
20		 -0.49 0.31 -0.31
64 AT2G10500 transposable element gene -0.48 0.32 -0.3
65 AT1G51410 NAD(P)-binding Rossmann-fold superfamily protein -0.48 0.33 -0.32
66 AT5G14870 cyclic nucleotide-gated channel 18 CYCLIC NUCLEOTIDE-GATED CHANNEL
18, cyclic nucleotide-gated
channel 18		 0.48 0.32 -0.31
67 AT5G32590 myosin heavy chain-related -0.48 0.31 -0.33
68 AT3G45820 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.48 0.29 -0.33
69 AT1G23990 transposable element gene 0.48 0.32 -0.31
70 AT4G10930 unknown protein; LOCATED IN: cellular_component unknown;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14
growth stages; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.48 0.31 -0.32
71 AT4G18230 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Oligosaccharide biosynthesis protein Alg14 like
(InterPro:IPR013969); Has 640 Blast hits to 640 proteins in
277 species: Archae - 4; Bacteria - 281; Metazoa - 94;
Fungi - 127; Plants - 57; Viruses - 0; Other Eukaryotes -
77 (source: NCBI BLink).		 -0.48 0.32 -0.32
72 AT5G38330 low-molecular-weight cysteine-rich 80 low-molecular-weight cysteine-rich
80		 0.48 0.31 -0.33
73 AT5G22875 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to
17322 proteins in 780 species: Archae - 12; Bacteria -
1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses
- 0; Other Eukaryotes - 2996 (source: NCBI BLink).		 0.48 0.3 -0.31
74 AT3G11200 alfin-like 2 alfin-like 2 -0.47 0.33 -0.31
75 AT5G22900 cation/H+ exchanger 3 ARABIDOPSIS THALIANA CATION/H+
EXCHANGER 3, cation/H+ exchanger 3		 -0.47 0.32 -0.35
76 AT1G80670 Transducin/WD40 repeat-like superfamily protein RNA export factor 1 -0.47 0.32 -0.32
77 AT4G24600 unknown protein; Has 10 Blast hits to 10 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 10; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.47 0.33 -0.32
78 AT3G52260 Pseudouridine synthase family protein -0.47 0.3 -0.3
79 AT4G21240 F-box and associated interaction domains-containing protein -0.46 0.31 -0.3
80 AT5G66970 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.46 0.31 -0.31
81 AT4G15520 tRNA/rRNA methyltransferase (SpoU) family protein -0.46 0.3 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
82 C0138 Linarin - - - -0.7 0.42 -0.45
83 C0146 Mannitol D-Mannitol Mannitol mannitol degradation II 0.64 0.45 -0.45 C0146
84 C0143 Maltitol - - starch degradation II 0.61 0.45 -0.44
85 C0148 Methionine D,L-Methionine L-Methionine thiamine biosynthesis II,
S-adenosyl-L-methionine biosynthesis,
S-adenosyl-L-methionine cycle II,
tRNA charging,
methionine degradation II,
ethylene biosynthesis I (plants),
methionine degradation I (to homocysteine),
S-methylmethionine cycle,
methionine salvage pathway,
methionine biosynthesis II,
folate transformations II,
homomethionine biosynthesis,
lipoate biosynthesis and incorporation I,
S-methyl-5-thio-alpha-D-ribose 1-phosphate degradation 		0.56 0.32 -0.32 C0148