AT3G28780 : -
Query Information
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AGICode AT3G28780
Description Protein of unknown function (DUF1216)
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G28780 Protein of unknown function (DUF1216) 1 0.32 -0.3
2 AT2G10500 transposable element gene -0.68 0.31 -0.33
3 AT4G24680 modifier of snc1 MODIFIER OF snc1 0.65 0.32 -0.33
4 AT1G57650 ATP binding 0.63 0.33 -0.33
5 AT3G59130 Cysteine/Histidine-rich C1 domain family protein -0.62 0.3 -0.34
6 AT4G31900 chromatin remodeling factor, putative PICKLE RELATED 2 0.61 0.3 -0.32
7 AT5G23650 Homeodomain-like transcriptional regulator 0.61 0.33 -0.34
8 AT3G12000 S-locus related protein SLR1, putative (S1) 0.61 0.3 -0.32
9 AT4G39490 cytochrome P450, family 96, subfamily A, polypeptide 10 cytochrome P450, family 96,
subfamily A, polypeptide 10		 -0.6 0.32 -0.29
10 AT5G39370 Curculin-like (mannose-binding) lectin family protein -0.6 0.32 -0.32
11 AT4G20090 Pentatricopeptide repeat (PPR) superfamily protein embryo defective 1025 0.59 0.32 -0.3
12 AT3G62140 CONTAINS InterPro DOMAIN/s: NEFA-interacting nuclear
protein NIP30, N-terminal (InterPro:IPR019331); Has 398
Blast hits to 395 proteins in 139 species: Archae - 0;
Bacteria - 6; Metazoa - 193; Fungi - 83; Plants - 36;
Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink).		 0.59 0.31 -0.31
13 AT1G68270 AMP-dependent synthetase and ligase family protein 0.59 0.34 -0.31
14 AT4G05230 Ubiquitin-like superfamily protein 0.59 0.3 -0.31
15 AT5G28410 unknown protein; Has 8 Blast hits to 7 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 8; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.58 0.33 -0.32
16 AT1G05740 Eukaryotic protein of unknown function (DUF842) -0.57 0.32 -0.31
17 AT5G22380 NAC domain containing protein 90 NAC domain containing protein 90,
NAC domain containing protein 90		 0.57 0.31 -0.31
18 AT3G55870 ADC synthase superfamily protein -0.57 0.31 -0.33
19 AT5G56330 alpha carbonic anhydrase 8 alpha carbonic anhydrase 8, A.
THALIANA ALPHA CARBONIC ANHYDRASE
8		 -0.57 0.3 -0.33
20 AT4G11210 Disease resistance-responsive (dirigent-like protein)
family protein		 -0.56 0.32 -0.33
21 AT2G13680 callose synthase 5 ARABIDOPSIS THALIANA GLUCAN
SYNTHASE-LIKE 2, callose synthase
5, GLUCAN SYNTHASE-LIKE 2		 -0.55 0.32 -0.3
22 AT4G09110 RING/U-box superfamily protein 0.55 0.31 -0.31
23 AT3G03860 APR-like 5 APR-like 5, APR-like 5 -0.54 0.31 -0.3
24 AT3G60410 Protein of unknown function (DUF1639) -0.54 0.31 -0.33
25 AT1G27130 glutathione S-transferase tau 13 glutathione S-transferase tau 13,
GLUTATHIONE S-TRANSFERASE 12,
glutathione S-transferase tau 13		 -0.54 0.31 -0.34
26 AT3G52260 Pseudouridine synthase family protein -0.54 0.32 -0.32
27 AT1G60280 NAC domain containing protein 23 NAC domain containing protein 23,
NAC domain containing protein 23		 0.54 0.32 -0.33
28 AT4G03090 sequence-specific DNA binding;sequence-specific DNA binding
transcription factors		 0.53 0.32 -0.31
29 AT1G32570 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.53 0.31 -0.32
30 AT1G04540 Calcium-dependent lipid-binding (CaLB domain) family
protein		 0.53 0.31 -0.32
31 AT5G51200 Protein of unknown function (DUF3414) EMBRYO DEFECTIVE 3142 0.53 0.33 -0.31
32 AT1G27080 nitrate transporter 1.6 nitrate transporter 1.6 0.52 0.32 -0.3
33 AT2G04675 unknown protein; Has 3 Blast hits to 3 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.52 0.3 -0.3
34 AT4G36050 endonuclease/exonuclease/phosphatase family protein 0.52 0.29 -0.32
35 AT1G52600 Peptidase S24/S26A/S26B/S26C family protein -0.52 0.32 -0.33
36 AT4G19890 Pentatricopeptide repeat (PPR-like) superfamily protein 0.52 0.32 -0.32
37 AT4G23910 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G10970.4); Has 52 Blast hits
to 52 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 52; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.52 0.31 -0.3
38 AT3G57060 binding 0.52 0.31 -0.31
39 AT5G05680 nuclear pore complex protein-related EMBRYO DEFECTIVE 2789, MODIFIER OF
SNC1,7		 0.52 0.33 -0.3
40 AT3G42310 unknown protein; Has 66 Blast hits to 66 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 12; Fungi - 0;
Plants - 18; Viruses - 31; Other Eukaryotes - 5 (source:
NCBI BLink).		 0.52 0.32 -0.31
41 AT3G30260 AGAMOUS-like 79 AGAMOUS-like 79 -0.52 0.32 -0.29
42 AT5G15100 Auxin efflux carrier family protein PIN-FORMED 8, PIN-FORMED 8 -0.52 0.32 -0.32
43 AT2G05020 transposable element gene 0.51 0.31 -0.31
44 AT3G14640 cytochrome P450, family 72, subfamily A, polypeptide 10 cytochrome P450, family 72,
subfamily A, polypeptide 10		 0.51 0.32 -0.33
45 AT1G17580 myosin 1 ARABIDOPSIS MYOSIN 1, myosin 1,
MYOSIN XI 1		 0.51 0.31 -0.32
46 AT2G17940 Plant protein of unknown function (DUF827) 0.51 0.3 -0.29
47 AT2G46050 Pentatricopeptide repeat (PPR-like) superfamily protein -0.51 0.33 -0.33
48 AT2G17210 Tetratricopeptide repeat (TPR)-like superfamily protein 0.51 0.33 -0.31
49 AT3G60070 Major facilitator superfamily protein 0.51 0.3 -0.32
50 AT3G17120 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G02380.1); Has 67 Blast hits
to 67 proteins in 11 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.51 0.32 -0.32
51 AT3G22640 cupin family protein PAP85 -0.51 0.3 -0.32
52 AT1G08270 CONTAINS InterPro DOMAIN/s: MIT (InterPro:IPR007330); BEST
Arabidopsis thaliana protein match is: AAA-type ATPase
family protein (TAIR:AT2G27600.1); Has 1133 Blast hits to
1133 proteins in 252 species: Archae - 47; Bacteria - 0;
Metazoa - 540; Fungi - 145; Plants - 223; Viruses - 0;
Other Eukaryotes - 178 (source: NCBI BLink).		 -0.5 0.3 -0.31
53 AT2G39550 Prenyltransferase family protein GERANYLGERANYLTRANSFERASE-I BETA
SUBUNIT, GGB, PGGT-I		 -0.5 0.33 -0.32
54 AT2G28540 RNA binding (RRM/RBD/RNP motifs) family protein 0.5 0.3 -0.32
55 AT3G45250 transposable element gene 0.5 0.32 -0.32
56 AT3G26010 Galactose oxidase/kelch repeat superfamily protein 0.5 0.34 -0.31
57 AT5G19090 Heavy metal transport/detoxification superfamily protein 0.5 0.29 -0.33
58 AT2G23960 Class I glutamine amidotransferase-like superfamily protein -0.49 0.3 -0.31
59 AT5G07910 Leucine-rich repeat (LRR) family protein -0.49 0.32 -0.31
60 AT2G35290 unknown protein; Has 39 Blast hits to 39 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.49 0.31 -0.3
61 AT3G52470 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 -0.49 0.32 -0.32
62 AT2G45650 AGAMOUS-like 6 AGAMOUS-like 6 0.48 0.31 -0.31
63 AT2G16160 transposable element gene 0.48 0.32 -0.31
64 AT1G27220 paired amphipathic helix repeat-containing protein -0.47 0.33 -0.33
65 AT1G49220 RING/U-box superfamily protein -0.47 0.33 -0.33
66 AT2G41370 Ankyrin repeat family protein / BTB/POZ domain-containing
protein		 BLADE ON PETIOLE2 -0.47 0.33 -0.31
67 AT4G11030 AMP-dependent synthetase and ligase family protein 0.47 0.3 -0.3
68 AT4G18230 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Oligosaccharide biosynthesis protein Alg14 like
(InterPro:IPR013969); Has 640 Blast hits to 640 proteins in
277 species: Archae - 4; Bacteria - 281; Metazoa - 94;
Fungi - 127; Plants - 57; Viruses - 0; Other Eukaryotes -
77 (source: NCBI BLink).		 -0.47 0.31 -0.34
69 AT5G47470 Nodulin MtN21 /EamA-like transporter family protein 0.47 0.32 -0.34
70 AT5G38330 low-molecular-weight cysteine-rich 80 low-molecular-weight cysteine-rich
80		 0.47 0.31 -0.31
71 AT4G17785 myb domain protein 39 myb domain protein 39 -0.46 0.35 -0.32
72 AT4G09470 Encodes a ECA1 gametogenesis related family protein
[pseudogene]		 0.46 0.32 -0.32
73 AT3G28155 BEST Arabidopsis thaliana protein match is: ARM repeat
superfamily protein (TAIR:AT2G35630.1); Has 19 Blast hits
to 19 proteins in 8 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 19; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.46 0.33 -0.31
74 AT5G17470 EF hand calcium-binding protein family 0.46 0.3 -0.33
75 AT1G17000 trehalose-phosphatase/synthase 3 trehalose-phosphatase/synthase 3,
TREHALOSE -6-PHOSPHATASE SYNTHASE
S3, trehalose-phosphatase/synthase
3		 -0.46 0.32 -0.3
76 AT3G03550 RING/U-box superfamily protein -0.45 0.31 -0.31
77 AT5G37840 BEST Arabidopsis thaliana protein match is: plastid
movement impaired 2 (TAIR:AT1G66480.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.45 0.34 -0.33
78 AT2G29790 Maternally expressed gene (MEG) family protein -0.45 0.28 -0.32
79 AT5G39630 Vesicle transport v-SNARE family protein -0.45 0.31 -0.32
80 AT2G13950 Cysteine/Histidine-rich C1 domain family protein -0.45 0.34 -0.32
81 AT4G32500 K+ transporter 5 K+ transporter 5, K+ transporter 5 -0.45 0.31 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
82 C0148 Methionine D,L-Methionine L-Methionine thiamine biosynthesis II,
S-adenosyl-L-methionine biosynthesis,
S-adenosyl-L-methionine cycle II,
tRNA charging,
methionine degradation II,
ethylene biosynthesis I (plants),
methionine degradation I (to homocysteine),
S-methylmethionine cycle,
methionine salvage pathway,
methionine biosynthesis II,
folate transformations II,
homomethionine biosynthesis,
lipoate biosynthesis and incorporation I,
S-methyl-5-thio-alpha-D-ribose 1-phosphate degradation 		0.57 0.33 -0.34 C0148