AT3G28540 : -
Query Information
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AGICode AT3G28540
Description P-loop containing nucleoside triphosphate hydrolases superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G28540 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 1 0.31 -0.32
2 AT5G10380 RING/U-box superfamily protein ATRING1, RING1 0.81 0.3 -0.3
3 AT5G53370 pectin methylesterase PCR fragment F PECTIN METHYLESTERASE PCR FRAGMENT
F, pectin methylesterase PCR
fragment F		 0.78 0.31 -0.32
4 AT1G21250 cell wall-associated kinase PRO25, cell wall-associated kinase 0.76 0.32 -0.3
5 AT3G47480 Calcium-binding EF-hand family protein 0.76 0.32 -0.31
6 AT1G65500 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 14 plant structures;
EXPRESSED DURING: 9 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G65486.1); Has 23 Blast hits to 23 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.76 0.33 -0.31
7 AT5G10760 Eukaryotic aspartyl protease family protein 0.75 0.32 -0.31
8 AT2G18660 plant natriuretic peptide A AtPNP-A, plant natriuretic peptide
A		 0.74 0.32 -0.31
9 AT1G10340 Ankyrin repeat family protein 0.74 0.34 -0.3
10 AT3G26210 cytochrome P450, family 71, subfamily B, polypeptide 23 cytochrome P450, family 71,
subfamily B, polypeptide 23		 0.73 0.31 -0.31
11 AT4G23130 cysteine-rich RLK (RECEPTOR-like protein kinase) 5 cysteine-rich RLK (RECEPTOR-like
protein kinase) 5, RECEPTOR-LIKE
PROTEIN KINASE 6		 0.73 0.31 -0.31
12 AT2G28890 poltergeist like 4 poltergeist like 4 0.72 0.33 -0.3
13 AT1G73680 alpha dioxygenase alpha dioxygenase 0.72 0.33 -0.32
14 AT1G33960 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 AVRRPT2-INDUCED GENE 1 0.71 0.33 -0.31
15 AT3G04110 glutamate receptor 1.1 ATGLR1.1, GLUTAMATE RECEPTOR 1,
glutamate receptor 1.1		 0.71 0.31 -0.32
16 AT5G60900 receptor-like protein kinase 1 receptor-like protein kinase 1 0.7 0.32 -0.29
17 AT2G25510 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.69 0.34 -0.32
18 AT4G08470 MAPK/ERK kinase kinase 3 MAPKKK10, MAPK/ERK kinase kinase 3 0.69 0.31 -0.3
19 AT1G13750 Purple acid phosphatases superfamily protein 0.69 0.33 -0.32
20 AT3G09900 RAB GTPase homolog E1E ATRAB8E, RAB GTPase homolog E1E,
RAB GTPase homolog E1E		 -0.68 0.33 -0.33
21 AT3G26230 cytochrome P450, family 71, subfamily B, polypeptide 24 cytochrome P450, family 71,
subfamily B, polypeptide 24		 0.68 0.33 -0.35
22 AT3G16030 lectin protein kinase family protein CALLUS EXPRESSION OF RBCS 101 0.67 0.31 -0.32
23 AT5G36290 Uncharacterized protein family (UPF0016) -0.67 0.32 -0.32
24 AT3G60600 vesicle associated protein (AT)VAP, vesicle associated
protein, VAP27,
VAMP/SYNAPTOBREVIN-ASSOCIATED
PROTEIN 27-1		 -0.67 0.32 -0.28
25 AT3G57510 Pectin lyase-like superfamily protein ADPG1 -0.67 0.31 -0.3
26 AT5G53550 YELLOW STRIPE like 3 YELLOW STRIPE LIKE 3, YELLOW
STRIPE like 3		 0.67 0.32 -0.3
27 AT2G25470 receptor like protein 21 receptor like protein 21, receptor
like protein 21		 0.66 0.33 -0.31
28 AT4G26200 1-amino-cyclopropane-1-carboxylate synthase 7 1-amino-cyclopropane-1-carboxylate
synthase 7, ATACS7		 0.66 0.31 -0.32
29 AT1G30900 VACUOLAR SORTING RECEPTOR 6 binding protein of 80 kDa 3;3,
VACUOLAR SORTING RECEPTOR 3;3,
VACUOLAR SORTING RECEPTOR 6		 0.66 0.33 -0.33
30 AT2G25000 WRKY DNA-binding protein 60 ATWRKY60, WRKY DNA-binding protein
60		 0.66 0.3 -0.33
31 AT3G57240 beta-1,3-glucanase 3 beta-1,3-glucanase 3 0.66 0.32 -0.32
32 AT5G44820 Nucleotide-diphospho-sugar transferase family protein 0.66 0.32 -0.31
33 AT3G26220 cytochrome P450, family 71, subfamily B, polypeptide 3 cytochrome P450, family 71,
subfamily B, polypeptide 3		 0.66 0.29 -0.35
34 AT2G14560 Protein of unknown function (DUF567) LATE UPREGULATED IN RESPONSE TO
HYALOPERONOSPORA PARASITICA		 0.66 0.3 -0.31
35 AT3G57260 beta-1,3-glucanase 2 AtPR2, BETA-1,3-GLUCANASE 2,
beta-1,3-glucanase 2,
PATHOGENESIS-RELATED PROTEIN 2,
PATHOGENESIS-RELATED PROTEIN 2		 0.66 0.33 -0.29
36 AT1G70250 receptor serine/threonine kinase, putative 0.65 0.28 -0.3
37 AT4G25170 Uncharacterised conserved protein (UCP012943) -0.65 0.31 -0.31
38 AT1G69720 heme oxygenase 3 heme oxygenase 3 0.65 0.33 -0.31
39 AT2G14610 pathogenesis-related gene 1 PATHOGENESIS-RELATED GENE 1,
PATHOGENESIS-RELATED GENE 1,
pathogenesis-related gene 1		 0.65 0.32 -0.3
40 AT2G23200 Protein kinase superfamily protein 0.65 0.32 -0.33
41 AT1G34180 NAC domain containing protein 16 NAC domain containing protein 16,
NAC domain containing protein 16		 0.64 0.3 -0.32
42 AT4G20070 allantoate amidohydrolase allantoate amidohydrolase,
allantoate amidohydrolase		 -0.64 0.31 -0.33
43 AT4G31720 TBP-associated factor II 15 SALT TOLERANCE DURING GERMINATION
1, TBP-ASSOCIATED FACTOR 10,
TBP-associated factor II 15		 -0.64 0.32 -0.32
44 AT1G76930 extensin 4 EXTENSIN 1, extensin 4, extensin
1, extensin 4, OBP3-RESPONSIVE
GENE 5		 0.64 0.3 -0.3
45 AT3G51860 cation exchanger 3 ATCAX3, ATHCX1, CAX1-LIKE, cation
exchanger 3		 0.64 0.3 -0.3
46 AT4G14365 XB3 ortholog 4 in Arabidopsis thaliana XB3 ortholog 4 in Arabidopsis
thaliana		 0.64 0.34 -0.33
47 AT1G19250 flavin-dependent monooxygenase 1 flavin-dependent monooxygenase 1 0.64 0.32 -0.32
48 AT1G07390 receptor like protein 1 receptor like protein 1, receptor
like protein 1		 0.64 0.33 -0.33
49 AT5G24530 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 DOWNY MILDEW RESISTANT 6 0.63 0.33 -0.32
50 AT4G26090 NB-ARC domain-containing disease resistance protein RESISTANT TO P. SYRINGAE 2 0.63 0.32 -0.31
51 AT5G65090 DNAse I-like superfamily protein BRISTLED 1, DEFORMED ROOT HAIRS 4,
MRH3		 0.63 0.32 -0.31
52 AT1G34070 CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein
(InterPro:IPR005162); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G48050.1); Has 648 Blast
hits to 647 proteins in 29 species: Archae - 0; Bacteria -
0; Metazoa - 16; Fungi - 25; Plants - 607; Viruses - 0;
Other Eukaryotes - 0 (source: NCBI BLink).		 0.63 0.34 -0.3
53 AT5G55170 small ubiquitin-like modifier 3 ATSUMO3, SMALL UBIQUITIN-LIKE
MODIFIER 3, SMALL UBIQUITIN-LIKE
MODIFIER 3, small ubiquitin-like
modifier 3		 0.63 0.32 -0.33
54 AT1G73805 Calmodulin binding protein-like SAR Deficient 1 0.62 0.32 -0.33
55 AT1G15790 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G15780.1); Has 170 Blast hits
to 94 proteins in 14 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 170; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.62 0.32 -0.32
56 AT5G53870 early nodulin-like protein 1 AtENODL1, early nodulin-like
protein 1		 0.62 0.31 -0.3
57 AT1G13470 Protein of unknown function (DUF1262) 0.62 0.3 -0.3
58 AT5G03350 Legume lectin family protein 0.62 0.32 -0.31
59 AT3G50480 homolog of RPW8 4 homolog of RPW8 4 0.61 0.31 -0.33
60 AT5G52750 Heavy metal transport/detoxification superfamily protein 0.61 0.32 -0.3
61 AT1G08450 calreticulin 3 A. thaliana calreticulin 3,
calreticulin 3, EMS-MUTAGENIZED
BRI1 SUPPRESSOR 2, PRIORITY IN
SWEET LIFE 1		 0.61 0.31 -0.3
62 AT5G45380 solute:sodium symporters;urea transmembrane transporters ATDUR3, DEGRADATION OF UREA 3 0.61 0.32 -0.3
63 AT5G07830 glucuronidase 2 glucuronidase 2, glucuronidase 2 0.6 0.34 -0.32
64 AT5G48400 Glutamate receptor family protein ATGLR1.2, GLUTAMATE RECEPTOR 1.2 -0.6 0.34 -0.31
65 AT2G43570 chitinase, putative chitinase, putative 0.6 0.32 -0.3
66 AT3G04730 indoleacetic acid-induced protein 16 indoleacetic acid-induced protein
16		 -0.6 0.3 -0.33
67 AT1G75760 ER lumen protein retaining receptor family protein 0.6 0.33 -0.32
68 AT2G17380 associated protein 19 associated protein 19 -0.6 0.33 -0.3
69 AT2G43620 Chitinase family protein 0.6 0.32 -0.32
70 AT4G25700 beta-hydroxylase 1 B1, BETA CAROTENOID HYDROXYLASE 1,
beta-hydroxylase 1, chy1		 -0.6 0.31 -0.32
71 AT2G24160 pseudogene, leucine rich repeat protein family, contains
leucine rich-repeat domains Pfam:PF00560,
INTERPRO:IPR001611; contains some similarity to Cf-4
(Lycopersicon hirsutum) gi|2808683|emb|CAA05268; blastp
match of 37% identity and 8.4e-98 P-value to
GP|2808683|emb|CAA05268.1||AJ002235 Cf-4 {Lycopersicon
hirsutum}		 0.6 0.32 -0.34
72 AT4G02075 RING/FYVE/PHD zinc finger superfamily protein pitchoun 1 0.6 0.31 -0.29
73 AT1G79660 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G16170.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.59 0.31 -0.34
74 AT5G46270 Disease resistance protein (TIR-NBS-LRR class) family 0.59 0.32 -0.31
75 AT2G28370 Uncharacterised protein family (UPF0497) -0.59 0.32 -0.32
76 AT1G53310 phosphoenolpyruvate carboxylase 1 ATPEPC1, phosphoenolpyruvate
carboxylase 1,
PEP(PHOSPHOENOLPYRUVATE)
CARBOXYLASE 1, phosphoenolpyruvate
carboxylase 1		 0.59 0.3 -0.34
77 AT5G46050 peptide transporter 3 ARABIDOPSIS THALIANA PEPTIDE
TRANSPORTER 3, peptide transporter
3		 0.59 0.3 -0.31
78 AT3G60420 Phosphoglycerate mutase family protein 0.59 0.32 -0.31
79 AT4G09460 myb domain protein 6 myb domain protein 6, myb domain
protein 6		 -0.59 0.31 -0.31
80 AT3G11730 Ras-related small GTP-binding family protein ATFP8, ARABIDOPSIS THALIANA RAB
GTPASE HOMOLOG D1, RAB GTPASE
HOMOLOG D1		 -0.59 0.28 -0.31
81 AT5G52760 Copper transport protein family 0.59 0.33 -0.31
82 AT5G02650 BEST Arabidopsis thaliana protein match is: Telomerase
activating protein Est1 (TAIR:AT1G28260.2); Has 20 Blast
hits to 20 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.59 0.31 -0.32
83 AT2G43190 ribonuclease P family protein -0.59 0.3 -0.3
84 AT5G10980 Histone superfamily protein -0.58 0.33 -0.32
85 AT4G31590 Cellulose-synthase-like C5 CELLULOSE-SYNTHASE LIKE C5,
Cellulose-synthase-like C5,
CELLULOSE-SYNTHASE LIKE C5,
Cellulose-synthase-like C5		 -0.58 0.33 -0.29
86 AT5G66040 sulfurtransferase protein 16 sulfurtransferase protein 16 0.58 0.33 -0.32
87 AT5G41100 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: plasma membrane;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
growth stages; BEST Arabidopsis thaliana protein match is:
hydroxyproline-rich glycoprotein family protein
(TAIR:AT3G26910.2); Has 1503 Blast hits to 1197 proteins in
220 species: Archae - 4; Bacteria - 108; Metazoa - 481;
Fungi - 318; Plants - 186; Viruses - 39; Other Eukaryotes -
367 (source: NCBI BLink).		 -0.58 0.31 -0.32
88 AT3G15720 Pectin lyase-like superfamily protein 0.57 0.32 -0.31
89 AT3G60020 SKP1-like 5 SKP1-like 5, SKP1-like 5 -0.57 0.3 -0.32
90 AT4G08850 Leucine-rich repeat receptor-like protein kinase family
protein		 0.57 0.31 -0.32
91 AT1G34750 Protein phosphatase 2C family protein 0.57 0.33 -0.32
92 AT3G22930 calmodulin-like 11 calmodulin-like 11 0.56 0.33 -0.32
93 AT1G09250 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.56 0.31 -0.3
94 AT2G37590 DNA binding with one finger 2.4 ATDOF2.4, DNA binding with one
finger 2.4		 -0.56 0.31 -0.31
95 AT5G11410 Protein kinase superfamily protein 0.56 0.32 -0.33
96 AT2G32290 beta-amylase 6 beta-amylase 6, BETA-AMYLASE 5 0.56 0.33 -0.31
97 AT5G34940 glucuronidase 3 glucuronidase 3, glucuronidase 3 0.56 0.32 -0.31
98 AT5G03530 RAB GTPase homolog C2A ATRAB, ATRAB ALPHA, ATRAB18B,
ARABIDOPSIS THALIANA RAB GTPASE
HOMOLOG C2A, RAB GTPase homolog
C2A		 -0.56 0.32 -0.31
99 AT1G49000 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: stem; BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT3G18560.1); Has
105 Blast hits to 105 proteins in 13 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 105; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.56 0.3 -0.34
100 AT5G27430 Signal peptidase subunit -0.55 0.31 -0.31
101 AT4G17245 RING/U-box superfamily protein -0.55 0.31 -0.31
102 AT5G64920 COP1-interacting protein 8 COP1-interacting protein 8 -0.55 0.32 -0.31
103 AT5G12230 MED19A; BEST Arabidopsis thaliana protein match is: unknown
protein (TAIR:AT5G19480.2); Has 1807 Blast hits to 1807
proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa
- 736; Fungi - 347; Plants - 385; Viruses - 0; Other
Eukaryotes - 339 (source: NCBI BLink).		 MED19A -0.55 0.32 -0.3
104 AT1G34780 APR-like 4 APR-like 4, APR-like 4 -0.55 0.34 -0.3
105 AT1G21240 wall associated kinase 3 wall associated kinase 3 0.55 0.31 -0.31
106 AT5G14940 Major facilitator superfamily protein 0.55 0.32 -0.34
107 AT1G74680 Exostosin family protein 0.55 0.33 -0.32
108 AT2G39200 Seven transmembrane MLO family protein MILDEW RESISTANCE LOCUS O 12,
MILDEW RESISTANCE LOCUS O 12		 0.55 0.3 -0.31
109 AT2G32680 receptor like protein 23 receptor like protein 23, receptor
like protein 23		 0.55 0.32 -0.31
110 AT4G04840 methionine sulfoxide reductase B6 methionine sulfoxide reductase B6,
methionine sulfoxide reductase B6		 -0.55 0.31 -0.32
111 AT2G39710 Eukaryotic aspartyl protease family protein 0.55 0.27 -0.33
112 AT2G44880 Pentatricopeptide repeat (PPR-like) superfamily protein -0.53 0.33 -0.31
113 AT5G60770 nitrate transporter 2.4 ARABIDOPSIS THALIANA NITRATE
TRANSPORTER 2.4, nitrate
transporter 2.4		 -0.53 0.32 -0.31
114 AT5G52570 beta-carotene hydroxylase 2 B2, BETA CAROTENOID HYDROXYLASE 2,
beta-carotene hydroxylase 2, CHY2		 -0.53 0.32 -0.3
115 AT3G58630 sequence-specific DNA binding transcription factors -0.52 0.31 -0.32
116 AT3G07640 unknown protein; Has 27 Blast hits to 27 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.52 0.32 -0.31
117 AT3G06020 Protein of unknown function (DUF3049) FANTASTIC FOUR 4 -0.52 0.3 -0.32
118 AT3G01270 Pectate lyase family protein -0.52 0.35 -0.33
119 AT2G06040 CONTAINS InterPro DOMAIN/s: Leucine-rich repeat,
cysteine-containing subtype (InterPro:IPR006553); BEST
Arabidopsis thaliana protein match is: RNI-like superfamily
protein (TAIR:AT5G21900.1); Has 5028 Blast hits to 2547
proteins in 240 species: Archae - 0; Bacteria - 125;
Metazoa - 2326; Fungi - 765; Plants - 1373; Viruses - 0;
Other Eukaryotes - 439 (source: NCBI BLink).		 -0.52 0.31 -0.33
120 AT2G36130 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family
protein		 -0.52 0.31 -0.3
121 AT4G17510 ubiquitin C-terminal hydrolase 3 ubiquitin C-terminal hydrolase 3 -0.51 0.31 -0.31
122 AT1G72630 ELF4-like 2 ELF4-like 2 -0.51 0.31 -0.3
123 AT1G14290 sphingoid base hydroxylase 2 sphingoid base hydroxylase 2 -0.51 0.32 -0.31
124 AT5G67110 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 ALCATRAZ -0.51 0.32 -0.32
125 AT1G06390 GSK3/SHAGGY-like protein kinase 1 ATGSK1, A. THALIANA SHAGGY-LIKE
KINASE GROUP 2 3, SHAGGY-LIKE
PROTEIN KINASE 22, BIN2-LIKE 2,
GSK3/SHAGGY-like protein kinase 1,
SHAGGY-LIKE PROTEIN KINASE 22		 -0.51 0.28 -0.32
126 AT3G02900 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G16660.1); Has 80 Blast
hits to 80 proteins in 21 species: Archae - 0; Bacteria -
4; Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.5 0.31 -0.3
127 AT2G18630 Protein of unknown function (DUF677) -0.5 0.3 -0.31
128 AT1G52740 histone H2A protein 9 histone H2A protein 9 -0.5 0.3 -0.33
129 AT3G06130 Heavy metal transport/detoxification superfamily protein -0.5 0.32 -0.33
130 AT4G16600 Nucleotide-diphospho-sugar transferases superfamily protein -0.5 0.31 -0.31
131 AT5G27210 Protein of unknown function, transmembrane-40 -0.5 0.33 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
132 C0138 Linarin - - - -0.69 0.44 -0.43
133 C0089 Fortunellin - - - -0.68 0.41 -0.47
134 C0229 Robinin - - flavone biosynthesis -0.68 0.44 -0.44
135 C0233 Sinapinic acid - cis-Sinapinate; Sinapate ferulate and sinapate biosynthesis,
sinapate ester biosynthesis,
free phenylpropanoid acid biosynthesis 		-0.66 0.42 -0.43 C0233
136 C0175 MST_2379.9 - - - 0.64 0.48 -0.45
137 C0096 Gluconic acid - D-Gluconate - 0.62 0.46 -0.46 C0096
138 C0024 2-(Anilinomethyl)pyrrolidine (S)-(+)-2-(anilinomethyl)pyrrolidine - - -0.61 0.44 -0.46
139 C0002 α-Lipoic acid (+/-)-α-Lipoic acid Lipoate cofactor of fatty acid biosynthesis -0.57 0.45 -0.46 C0002