AT3G28270 : -
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT3G28270
Description Protein of unknown function (DUF677)
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G28270 Protein of unknown function (DUF677) 1 0.32 -0.34
2 AT4G38060 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G65480.1); Has 63 Blast hits
to 63 proteins in 13 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).
0.77 0.32 -0.28
3 AT2G14660 unknown protein; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0310
(InterPro:IPR002740); Has 2761 Blast hits to 2761 proteins
in 686 species: Archae - 5; Bacteria - 1143; Metazoa - 73;
Fungi - 78; Plants - 42; Viruses - 0; Other Eukaryotes -
1420 (source: NCBI BLink).
-0.76 0.34 -0.32
4 AT2G01640 unknown protein; Has 51 Blast hits to 51 proteins in 21
species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 2;
Plants - 41; Viruses - 0; Other Eukaryotes - 7 (source:
NCBI BLink).
-0.75 0.33 -0.32
5 AT5G43600 ureidoglycolate amidohydrolase ARABIDOPSIS THALIANA ALLANTOATE
AMIDOHYDROLASE 2, ureidoglycolate
amidohydrolase
0.75 0.31 -0.31
6 AT1G04340 HR-like lesion-inducing protein-related -0.73 0.31 -0.3
7 AT1G15480 Tetratricopeptide repeat (TPR)-like superfamily protein -0.73 0.31 -0.29
8 AT3G12860 NOP56-like pre RNA processing ribonucleoprotein -0.73 0.3 -0.32
9 AT5G11630 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G17310.1); Has 90 Blast
hits to 90 proteins in 10 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 90; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).
-0.73 0.33 -0.33
10 AT1G16060 ARIA-interacting double AP2 domain protein ARIA-interacting double AP2 domain
protein
-0.73 0.3 -0.3
11 AT3G13672 TRAF-like superfamily protein 0.73 0.31 -0.32
12 AT4G09340 SPla/RYanodine receptor (SPRY) domain-containing protein 0.72 0.32 -0.31
13 AT2G18220 Noc2p family -0.72 0.31 -0.31
14 AT3G10550 Myotubularin-like phosphatases II superfamily Arabidopsis thaliana myotubularin
1, myotubularin 1
0.72 0.32 -0.32
15 AT5G65760 Serine carboxypeptidase S28 family protein 0.72 0.32 -0.32
16 AT1G08750 Peptidase C13 family -0.72 0.31 -0.33
17 AT1G01770 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1446 (InterPro:IPR010839); Has 1597
Blast hits to 1509 proteins in 306 species: Archae - 4;
Bacteria - 843; Metazoa - 22; Fungi - 131; Plants - 31;
Viruses - 0; Other Eukaryotes - 566 (source: NCBI BLink).
0.71 0.32 -0.31
18 AT5G02880 ubiquitin-protein ligase 4 ubiquitin-protein ligase 4 0.71 0.34 -0.31
19 AT4G27720 Major facilitator superfamily protein -0.71 0.3 -0.32
20 AT5G28520 Mannose-binding lectin superfamily protein 0.71 0.3 -0.34
21 AT5G49460 ATP citrate lyase subunit B 2 ATP citrate lyase subunit B 2 -0.71 0.33 -0.31
22 AT5G57120 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: nucleolus;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: LisH
dimerisation motif (InterPro:IPR006594), SRP40, C-terminal
(InterPro:IPR007718); Has 101969 Blast hits to 55488
proteins in 2506 species: Archae - 424; Bacteria - 13843;
Metazoa - 37674; Fungi - 9726; Plants - 4941; Viruses -
569; Other Eukaryotes - 34792 (source: NCBI BLink).
-0.71 0.31 -0.33
23 AT3G47600 myb domain protein 94 myb domain protein 94, ATMYBCP70,
myb domain protein 94
0.7 0.3 -0.3
24 AT1G08580 unknown protein; Has 39 Blast hits to 39 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 35; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).
-0.7 0.31 -0.34
25 AT4G18070 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G29530.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).
-0.7 0.3 -0.3
26 AT1G72770 homology to ABI1 HYPERSENSITIVE TO ABA1 0.7 0.32 -0.33
27 AT3G58450 Adenine nucleotide alpha hydrolases-like superfamily
protein
0.7 0.32 -0.31
28 AT3G61620 3'-5'-exoribonuclease family protein RRP41 -0.7 0.29 -0.32
29 AT2G31725 Eukaryotic protein of unknown function (DUF842) -0.7 0.29 -0.32
30 AT5G09250 ssDNA-binding transcriptional regulator KIWI -0.7 0.35 -0.32
31 AT4G03180 CONTAINS InterPro DOMAIN/s: rRNA processing
(InterPro:IPR013730); Has 898 Blast hits to 687 proteins in
142 species: Archae - 2; Bacteria - 28; Metazoa - 200;
Fungi - 99; Plants - 63; Viruses - 0; Other Eukaryotes -
506 (source: NCBI BLink).
-0.7 0.3 -0.33
32 AT1G65660 Pre-mRNA splicing Prp18-interacting factor SWELLMAP 1 0.7 0.29 -0.32
33 AT5G27470 seryl-tRNA synthetase / serine--tRNA ligase -0.7 0.31 -0.31
34 AT4G34670 Ribosomal protein S3Ae -0.69 0.3 -0.33
35 AT2G14520 CBS domain-containing protein with a domain of unknown
function (DUF21)
0.69 0.33 -0.33
36 AT1G64530 Plant regulator RWP-RK family protein -0.69 0.31 -0.33
37 AT4G35310 calmodulin-domain protein kinase 5 ATCPK5, calmodulin-domain protein
kinase 5
-0.69 0.31 -0.31
38 AT1G36310 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein
-0.69 0.32 -0.31
39 AT5G18440 CONTAINS InterPro DOMAIN/s: Nuclear fragile X mental
retardation-interacting protein 1, conserved region
(InterPro:IPR019496); Has 1333 Blast hits to 1211 proteins
in 205 species: Archae - 0; Bacteria - 137; Metazoa - 339;
Fungi - 162; Plants - 70; Viruses - 6; Other Eukaryotes -
619 (source: NCBI BLink).
AtNUFIP, nuclear FMRP-interacting
protein
-0.68 0.31 -0.32
40 AT4G30960 SOS3-interacting protein 3 CBL-INTERACTING PROTEIN KINASE 6,
CBL-INTERACTING PROTEIN KINASE 6,
SOS3-interacting protein 3,
SNF1-RELATED PROTEIN KINASE 3.14
0.68 0.31 -0.3
41 AT1G63240 unknown protein; Has 460 Blast hits to 413 proteins in 106
species: Archae - 5; Bacteria - 12; Metazoa - 152; Fungi -
46; Plants - 43; Viruses - 2; Other Eukaryotes - 200
(source: NCBI BLink).
0.68 0.32 -0.31
42 AT1G78690 Phospholipid/glycerol acyltransferase family protein At1g78690p -0.68 0.3 -0.32
43 AT1G73040 Mannose-binding lectin superfamily protein 0.68 0.32 -0.32
44 AT4G31790 Tetrapyrrole (Corrin/Porphyrin) Methylases -0.68 0.34 -0.32
45 AT3G05060 NOP56-like pre RNA processing ribonucleoprotein -0.68 0.32 -0.31
46 AT5G10010 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
nucleolus; EXPRESSED IN: 25 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G64910.1); Has 33260
Blast hits to 16857 proteins in 1270 species: Archae - 88;
Bacteria - 3040; Metazoa - 11915; Fungi - 3137; Plants -
1371; Viruses - 424; Other Eukaryotes - 13285 (source: NCBI
BLink).
-0.68 0.31 -0.3
47 AT2G19740 Ribosomal protein L31e family protein -0.68 0.33 -0.3
48 AT3G46040 ribosomal protein S15A D ribosomal protein S15A D -0.68 0.31 -0.34
49 AT1G32440 plastidial pyruvate kinase 3 plastidial pyruvate kinase 3 -0.67 0.3 -0.31
50 AT4G29890 choline monooxygenase, putative (CMO-like) 0.67 0.32 -0.32
51 AT3G28050 nodulin MtN21 /EamA-like transporter family protein 0.67 0.31 -0.32
52 AT2G44820 unknown protein; Has 70 Blast hits to 70 proteins in 25
species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 4;
Plants - 47; Viruses - 0; Other Eukaryotes - 10 (source:
NCBI BLink).
-0.67 0.32 -0.33
53 AT2G39795 Mitochondrial glycoprotein family protein -0.67 0.3 -0.3
54 AT3G16230 Predicted eukaryotic LigT 0.67 0.32 -0.32
55 AT5G37670 HSP20-like chaperones superfamily protein 0.67 0.31 -0.31
56 AT1G08810 myb domain protein 60 myb domain protein 60, myb domain
protein 60
-0.67 0.32 -0.3
57 AT5G18850 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to
1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).
0.67 0.3 -0.31
58 AT1G12270 stress-inducible protein, putative Hop1 -0.67 0.32 -0.32
59 AT3G62650 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G47485.1); Has 57 Blast hits
to 57 proteins in 13 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).
0.67 0.31 -0.34
60 AT1G72730 DEA(D/H)-box RNA helicase family protein -0.67 0.34 -0.29
61 AT1G48580 unknown protein; Has 91 Blast hits to 91 proteins in 40
species: Archae - 0; Bacteria - 0; Metazoa - 49; Fungi - 0;
Plants - 28; Viruses - 0; Other Eukaryotes - 14 (source:
NCBI BLink).
-0.66 0.31 -0.35
62 AT5G67630 P-loop containing nucleoside triphosphate hydrolases
superfamily protein
-0.66 0.32 -0.31
63 AT1G80310 sulfate transmembrane transporters molybdate transporter 2 0.66 0.32 -0.32
64 AT1G66740 ASF1 like histone chaperone ANTI- SILENCING FUNCTION 1A,
AtSP7, SGA2, SP7
-0.66 0.31 -0.31
65 AT2G28380 dsRNA-binding protein 2 dsRNA-binding protein 2 -0.66 0.33 -0.31
66 AT1G54160 nuclear factor Y, subunit A5 nuclear factor Y, subunit A5,
NUCLEAR FACTOR Y A5
0.66 0.32 -0.31
67 AT1G71960 ATP-binding casette family G25 ATP-binding casette G25,
Arabidopsis thaliana ATP-binding
cassette G25
0.66 0.31 -0.33
68 AT1G30260 BEST Arabidopsis thaliana protein match is:
Galactosyltransferase family protein (TAIR:AT4G21060.1);
Has 30 Blast hits to 30 proteins in 8 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).
0.66 0.3 -0.33
69 AT3G55510 Noc2p family REBELOTE -0.66 0.31 -0.31
70 AT4G34360 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein
-0.66 0.32 -0.33
71 AT1G64110 P-loop containing nucleoside triphosphate hydrolases
superfamily protein
DUO1-activated ATPase 1 0.65 0.32 -0.3
72 AT3G06510 Glycosyl hydrolase superfamily protein SENSITIVE TO FREEZING 2, SENSITIVE
TO FREEZING 2
0.65 0.33 -0.29
73 AT2G31710 Vacuolar ATPase assembly integral membrane protein
VMA21-like domain
-0.65 0.3 -0.29
74 AT1G13160 ARM repeat superfamily protein -0.65 0.31 -0.31
75 AT3G05990 Leucine-rich repeat (LRR) family protein -0.65 0.32 -0.33
76 AT5G25220 KNOTTED1-like homeobox gene 3 KNOTTED1-like homeobox gene 3 0.65 0.32 -0.31
77 AT4G32400 Mitochondrial substrate carrier family protein ARABIDOPSIS THALIANA BRITTLE 1,
EMBRYO DEFECTIVE 104, EMBRYO
DEFECTIVE 42, SODIUM
HYPERSENSITIVE 1
-0.65 0.31 -0.32
78 AT1G49240 actin 8 actin 8, FRIZZY AND KINKED SHOOTS -0.65 0.31 -0.31
79 AT3G12340 FKBP-like peptidyl-prolyl cis-trans isomerase family
protein
-0.65 0.33 -0.32
80 AT4G12030 bile acid transporter 5 BILE ACID:SODIUM SYMPORTER FAMILY
PROTEIN 5, bile acid transporter 5
-0.65 0.31 -0.3
81 AT2G18520 Tetratricopeptide repeat (TPR)-like superfamily protein -0.65 0.32 -0.31
82 AT3G26922 F-box/RNI-like superfamily protein -0.65 0.32 -0.31
83 AT3G27820 monodehydroascorbate reductase 4 MONODEHYDROASCORBATE REDUCTASE 4,
monodehydroascorbate reductase 4
0.65 0.32 -0.32
84 AT1G31660 CONTAINS InterPro DOMAIN/s: Bystin (InterPro:IPR007955);
Has 475 Blast hits to 467 proteins in 210 species: Archae -
0; Bacteria - 9; Metazoa - 155; Fungi - 139; Plants - 55;
Viruses - 0; Other Eukaryotes - 117 (source: NCBI BLink).
-0.65 0.3 -0.33
85 AT1G11720 starch synthase 3 starch synthase 3, starch synthase
3
0.65 0.31 -0.31
86 AT5G14450 GDSL-like Lipase/Acylhydrolase superfamily protein 0.64 0.32 -0.33
87 AT3G09890 Ankyrin repeat family protein -0.64 0.32 -0.33
88 AT5G11350 DNAse I-like superfamily protein 0.64 0.31 -0.31
89 AT4G20890 tubulin beta-9 chain tubulin beta-9 chain -0.64 0.31 -0.3
90 AT4G21720 unknown protein; Has 2692 Blast hits to 975 proteins in 186
species: Archae - 4; Bacteria - 460; Metazoa - 658; Fungi -
93; Plants - 1089; Viruses - 100; Other Eukaryotes - 288
(source: NCBI BLink).
-0.64 0.32 -0.31
91 AT2G31410 unknown protein; Has 1719 Blast hits to 1091 proteins in
184 species: Archae - 5; Bacteria - 24; Metazoa - 559;
Fungi - 169; Plants - 192; Viruses - 1; Other Eukaryotes -
769 (source: NCBI BLink).
-0.64 0.33 -0.3
92 AT4G19160 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).
0.64 0.31 -0.34
93 AT1G26840 origin recognition complex protein 6 ARABIDOPSIS THALIANA ORIGIN
RECOGNITION COMPLEX PROTEIN 6,
origin recognition complex protein
6
-0.64 0.31 -0.31
94 AT3G02850 STELAR K+ outward rectifier STELAR K+ outward rectifier -0.63 0.3 -0.32
95 AT2G19385 zinc ion binding -0.63 0.3 -0.3
96 AT4G18975 Pentatricopeptide repeat (PPR) superfamily protein 0.63 0.32 -0.3
97 AT5G22740 cellulose synthase-like A02 ARABIDOPSIS THALIANA CELLULOSE
SYNTHASE-LIKE A02, ARABIDOPSIS
THALIANA CELLULOSE SYNTHASE-LIKE
A2, cellulose synthase-like A02,
CELLULOSE SYNTHASE-LIKE A 2
-0.63 0.3 -0.35
98 AT5G02270 non-intrinsic ABC protein 9 ATP-binding cassette I20,
ARABIDOPSIS THALIANA NON-INTRINSIC
ABC PROTEIN 9, non-intrinsic ABC
protein 9
-0.63 0.31 -0.33
99 AT1G03420 transposable element gene sadhu non-coding retrotransposon
4-2
-0.63 0.33 -0.3
100 AT3G07600 Heavy metal transport/detoxification superfamily protein -0.63 0.32 -0.32
101 AT5G28150 Plant protein of unknown function (DUF868) -0.63 0.32 -0.33
102 AT4G13210 Pectin lyase-like superfamily protein -0.63 0.31 -0.3
103 AT4G18020 CheY-like two-component responsive regulator family protein APRR2, PSEUDO-RESPONSE REGULATOR 2 0.62 0.3 -0.33
104 AT5G22460 alpha/beta-Hydrolases superfamily protein 0.62 0.31 -0.32
105 AT5G02670 BEST Arabidopsis thaliana protein match is: poly(A)
polymerase 3 (TAIR:AT3G06560.1); Has 14 Blast hits to 8
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 14; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).
0.62 0.31 -0.33
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
106 C0211 PR_MST_2158.8 - - - 0.64 0.44 -0.43