AT3G28230 : -
Query Information
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AGICode AT3G28230
Description FUNCTIONS IN: molecular_function unknown; INVOLVED IN: gene silencing; LOCATED IN: nucleus; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Something about silencing protein 10 (Sas10), C-terminal (InterPro:IPR018972); BEST Arabidopsis thaliana protein match is: Sas10/U3 ribonucleoprotein (Utp) family protein (TAIR:AT2G43650.1); Has 374 Blast hits to 360 proteins in 175 species: Archae - 0; Bacteria - 4; Metazoa - 107; Fungi - 115; Plants - 56; Viruses - 0; Other Eukaryotes - 92 (source: NCBI BLink).
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G28230 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: gene
silencing; LOCATED IN: nucleus; EXPRESSED IN: 15 plant
structures; EXPRESSED DURING: 6 growth stages; CONTAINS
InterPro DOMAIN/s: Something about silencing protein 10
(Sas10), C-terminal (InterPro:IPR018972); BEST Arabidopsis
thaliana protein match is: Sas10/U3 ribonucleoprotein (Utp)
family protein (TAIR:AT2G43650.1); Has 374 Blast hits to
360 proteins in 175 species: Archae - 0; Bacteria - 4;
Metazoa - 107; Fungi - 115; Plants - 56; Viruses - 0; Other
Eukaryotes - 92 (source: NCBI BLink).		 1 0.32 -0.31
2 AT4G01970 stachyose synthase stachyose synthase, raffinose
synthase 4, stachyose synthase		 0.77 0.3 -0.31
3 AT2G16360 Ribosomal protein S25 family protein 0.64 0.3 -0.32
4 AT5G05790 Duplicated homeodomain-like superfamily protein 0.63 0.32 -0.31
5 AT1G23650 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.62 0.31 -0.32
6 AT2G36940 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.6 0.31 -0.31
7 AT2G13920 pseudogene, CHP-rich zinc finger protein, putative,
contains weak PHD zinc finger motifscontains weak PHD zinc
finger motifsDC1 domain, a divergent protein kinase C
domain of unknown function.		 0.59 0.33 -0.31
8 AT1G29820 Magnesium transporter CorA-like family protein 0.58 0.34 -0.34
9 AT5G37990 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.58 0.34 -0.33
10 AT3G52770 protein binding LITTLE ZIPPER 3 -0.58 0.31 -0.29
11 AT5G39500 GNOM-like 1 ENDOPLASMIC RETICULUM MORPHOLOGY
1, GNOM-like 1		 0.57 0.3 -0.29
12 AT3G42880 Leucine-rich repeat protein kinase family protein 0.56 0.31 -0.31
13 AT5G46850 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.55 0.33 -0.31
14 AT5G27020 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.55 0.32 -0.31
15 AT4G09610 GAST1 protein homolog 2 GAST1 protein homolog 2 0.55 0.3 -0.29
16 AT3G28670 oxidoreductase, zinc-binding dehydrogenase family protein 0.54 0.32 -0.31
17 AT3G47110 Leucine-rich repeat protein kinase family protein 0.54 0.33 -0.31
18 AT4G29260 HAD superfamily, subfamily IIIB acid phosphatase 0.54 0.32 -0.31
19 AT4G33740 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G37820.1); Has 138210 Blast
hits to 73191 proteins in 2959 species: Archae - 732;
Bacteria - 18006; Metazoa - 48521; Fungi - 16820; Plants -
7078; Viruses - 1046; Other Eukaryotes - 46007 (source:
NCBI BLink).		 -0.54 0.33 -0.29
20 AT1G53950 Ubiquitin-like superfamily protein -0.54 0.3 -0.31
21 AT2G12870 transposable element gene 0.54 0.31 -0.32
22 AT3G63340 Protein phosphatase 2C family protein -0.53 0.31 -0.31
23 AT2G28610 Homeodomain-like superfamily protein PRESSED FLOWER, PRESSED FLOWER 1,
WUSCHEL RELATED HOMEOBOX 3		 0.52 0.31 -0.31
24 AT1G32980 Subtilisin-like serine endopeptidase family protein -0.52 0.3 -0.32
25 AT5G43770 proline-rich family protein 0.52 0.31 -0.3
26 AT5G38390 F-box/RNI-like superfamily protein 0.51 0.32 -0.3
27 ATMG01400 hypothetical protein ORF105B 0.51 0.31 -0.3
28 AT3G20650 mRNA capping enzyme family protein -0.51 0.32 -0.32
29 AT5G38960 RmlC-like cupins superfamily protein 0.51 0.29 -0.31
30 AT2G42030 RING/U-box superfamily protein 0.51 0.32 -0.31
31 AT4G16000 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G15990.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.5 0.32 -0.32
32 AT4G25530 FLOWERING WAGENINGEN FLOWERING WAGENINGEN, HOMEODOMAIN
GLABROUS 6		 0.49 0.33 -0.32
33 AT1G70000 myb-like transcription factor family protein -0.49 0.33 -0.33
34 AT3G53910 malate dehydrogenase-related -0.49 0.31 -0.32
35 AT2G43590 Chitinase family protein -0.48 0.33 -0.31
36 AT1G34150 Pseudouridine synthase family protein -0.48 0.34 -0.33
37 AT5G10230 annexin 7 ANNEXIN 7, annexin 7 -0.48 0.31 -0.33
38 AT5G11400 Protein kinase superfamily protein -0.48 0.31 -0.31
39 AT4G31680 Transcriptional factor B3 family protein -0.48 0.31 -0.32
40 AT4G25434 nudix hydrolase homolog 10 nudix hydrolase homolog 10, nudix
hydrolase homolog 10		 -0.47 0.3 -0.33
41 AT4G15150 glycine-rich protein -0.46 0.33 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
42 C0127 Isorhamnetin-hexosyl-rhamnoside - - - 0.73 0.43 -0.42
43 C0179 MST_2494.8 - - - 0.51 0.33 -0.32