AT3G12030 : -
Query Information
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AGICode AT3G12030
Description Protein of unknown function DUF106, transmembrane
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G12030 Protein of unknown function DUF106, transmembrane 1 0.32 -0.34
2 AT5G63400 adenylate kinase 1 adenylate kinase 1 0.8 0.32 -0.31
3 AT4G03205 Coproporphyrinogen III oxidase hemf2 -0.79 0.3 -0.32
4 AT4G01100 adenine nucleotide transporter 1 adenine nucleotide transporter 1 0.77 0.32 -0.3
5 AT5G67220 FMN-linked oxidoreductases superfamily protein 0.77 0.32 -0.32
6 AT5G19680 Leucine-rich repeat (LRR) family protein 0.77 0.31 -0.3
7 AT4G15640 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G21465.1); Has 38 Blast hits
to 38 proteins in 14 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.77 0.33 -0.32
8 AT1G07210 Ribosomal protein S18 0.77 0.31 -0.34
9 AT1G19360 Nucleotide-diphospho-sugar transferase family protein reduced residual arabinose 3 0.76 0.34 -0.31
10 AT3G55850 Amidohydrolase family LONG AFTER FAR-RED 3, LONG AFTER
FAR-RED 3 ISOFORM 1, LAF3 ISOFORM
2		 -0.76 0.3 -0.31
11 AT1G36050 Endoplasmic reticulum vesicle transporter protein 0.75 0.3 -0.32
12 AT3G16760 Tetratricopeptide repeat (TPR)-like superfamily protein 0.75 0.34 -0.31
13 AT4G36280 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
family protein		 -0.75 0.34 -0.3
14 AT5G25560 CHY-type/CTCHY-type/RING-type Zinc finger protein -0.74 0.31 -0.34
15 AT1G26580 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: ELM2 domain-containing protein
(TAIR:AT2G03470.1); Has 161 Blast hits to 161 proteins in
17 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi -
4; Plants - 156; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.74 0.31 -0.31
16 AT5G54900 RNA-binding protein 45A RNA-binding protein 45A,
RNA-binding protein 45A		 0.74 0.33 -0.33
17 AT4G19410 Pectinacetylesterase family protein 0.74 0.3 -0.33
18 AT4G31180 Class II aminoacyl-tRNA and biotin synthetases superfamily
protein		 0.73 0.3 -0.32
19 AT4G15850 RNA helicase 1 RNA helicase 1, RNA helicase 1 0.73 0.31 -0.31
20 AT4G39820 Tetratricopeptide repeat (TPR)-like superfamily protein 0.73 0.31 -0.34
21 AT3G43220 Phosphoinositide phosphatase family protein -0.73 0.31 -0.32
22 AT5G62290 nucleotide-sensitive chloride conductance regulator (ICln)
family protein		 0.73 0.29 -0.31
23 AT1G04070 translocase of outer membrane 22-I ATTOM22-I, translocase of outer
membrane 22-I		 0.73 0.31 -0.3
24 AT3G03300 dicer-like 2 DICER-LIKE 2, dicer-like 2 -0.72 0.34 -0.3
25 AT3G46060 RAB GTPase homolog 8A ARA-3, ARA3, RAB GTPase homolog
8A, ATRABE1C, RAB GTPase homolog
8A, RABE1c		 0.72 0.32 -0.3
26 AT1G19520 pentatricopeptide (PPR) repeat-containing protein NUCLEAR FUSION DEFECTIVE 5 0.71 0.31 -0.32
27 AT1G49240 actin 8 actin 8, FRIZZY AND KINKED SHOOTS 0.71 0.32 -0.31
28 AT1G80800 pseudogene, 40S ribosomal protein S12 (RPS12B), similar to
ribosomal protein S12 GB:AAD39838 GI:5106775 from (Hordeum
vulgare); blastp match of 65% identity and 4.7e-12 P-value
to GP|23617253|dbj|BAC20920.1||AP005764 putative 40S
ribosomal protein S12 {Oryza sativa (japonica
cultivar-group)}		 -0.71 0.32 -0.31
29 AT3G17780 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
intracellular protein transport; LOCATED IN: endomembrane
system, integral to membrane, endoplasmic reticulum;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: B-cell
receptor-associated 31-like (InterPro:IPR008417); BEST
Arabidopsis thaliana protein match is: B-cell
receptor-associated 31-like (TAIR:AT1G48440.1); Has 102
Blast hits to 102 proteins in 17 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 102; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.71 0.31 -0.31
30 AT1G71780 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endoplasmic reticulum; EXPRESSED IN: 25 plant structures;
EXPRESSED DURING: 15 growth stages; Has 34 Blast hits to 34
proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.71 0.31 -0.3
31 AT3G12370 Ribosomal protein L10 family protein 0.71 0.29 -0.33
32 AT4G37190 LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 20
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: Beta tubulin, autoregulation
binding site (InterPro:IPR013838), Misato Segment II,
myosin-like (InterPro:IPR019605), Tubulin/FtsZ, N-terminal
(InterPro:IPR019746); Has 345 Blast hits to 341 proteins in
161 species: Archae - 0; Bacteria - 0; Metazoa - 131; Fungi
- 140; Plants - 55; Viruses - 0; Other Eukaryotes - 19
(source: NCBI BLink).		 0.7 0.33 -0.31
33 AT1G52070 Mannose-binding lectin superfamily protein 0.7 0.31 -0.3
34 AT1G11410 S-locus lectin protein kinase family protein -0.7 0.32 -0.32
35 AT5G26280 TRAF-like family protein 0.7 0.3 -0.3
36 AT5G13420 Aldolase-type TIM barrel family protein 0.7 0.3 -0.33
37 AT4G26650 RNA-binding (RRM/RBD/RNP motifs) family protein 0.7 0.29 -0.31
38 AT4G02430 RNA-binding (RRM/RBD/RNP motifs) family protein Serine/Arginine-Rich Protein
Splicing Factor 34b,
Serine/Arginine-Rich Protein
Splicing Factor 34b		 -0.7 0.3 -0.34
39 AT1G26150 proline-rich extensin-like receptor kinase 10 proline-rich extensin-like
receptor kinase 10, proline-rich
extensin-like receptor kinase 10		 -0.69 0.32 -0.31
40 AT1G77800 PHD finger family protein -0.69 0.31 -0.32
41 AT5G09450 Tetratricopeptide repeat (TPR)-like superfamily protein 0.69 0.33 -0.33
42 AT1G73250 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase 1 ACTIVATING TRANSCRIPTION FACTOR 5,
GDP-4-keto-6-deoxymannose-3,5-epim
erase-4-reductase 1		 0.69 0.32 -0.32
43 AT2G42330 GC-rich sequence DNA-binding factor-like protein with
Tuftelin interacting domain		 -0.69 0.31 -0.32
44 AT2G30790 photosystem II subunit P-2 photosystem II subunit P-2 -0.69 0.3 -0.31
45 AT1G17870 ethylene-dependent gravitropism-deficient and
yellow-green-like 3		 ETHYLENE-DEPENDENT
GRAVITROPISM-DEFICIENT AND
YELLOW-GREEN-LIKE 3,
ETHYLENE-DEPENDENT
GRAVITROPISM-DEFICIENT AND
YELLOW-GREEN-LIKE 3		 -0.69 0.32 -0.33
46 AT5G16490 ROP-interactive CRIB motif-containing protein 4 ROP-interactive CRIB
motif-containing protein 4		 -0.69 0.31 -0.32
47 AT1G50370 Calcineurin-like metallo-phosphoesterase superfamily
protein		 AtFYPP1, flower- specific,
phytochrome-associated protein
phosphatase 1		 0.69 0.32 -0.35
48 AT5G39580 Peroxidase superfamily protein 0.68 0.3 -0.34
49 AT2G34140 Dof-type zinc finger DNA-binding family protein 0.68 0.3 -0.3
50 AT3G51950 Zinc finger (CCCH-type) family protein / RNA recognition
motif (RRM)-containing protein		 -0.68 0.32 -0.32
51 AT3G53110 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 LOW EXPRESSION OF OSMOTICALLY
RESPONSIVE GENES 4		 0.68 0.31 -0.32
52 AT4G08460 Protein of unknown function (DUF1644) 0.68 0.3 -0.33
53 AT1G22570 Major facilitator superfamily protein 0.68 0.3 -0.31
54 AT3G28760 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: 3-dehydroquinate
synthase, prokaryotic-type (InterPro:IPR002812); Has 390
Blast hits to 390 proteins in 131 species: Archae - 144;
Bacteria - 105; Metazoa - 0; Fungi - 0; Plants - 54;
Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink).		 -0.68 0.29 -0.33
55 AT5G55940 Uncharacterised protein family (UPF0172) embryo defective 2731 0.68 0.29 -0.32
56 AT1G52200 PLAC8 family protein 0.68 0.31 -0.31
57 AT1G71940 SNARE associated Golgi protein family 0.68 0.3 -0.31
58 AT3G10940 dual specificity protein phosphatase (DsPTP1) family
protein		 LIKE SEX4 2 -0.67 0.32 -0.32
59 AT4G27000 RNA-binding (RRM/RBD/RNP motifs) family protein ATRBP45C 0.67 0.3 -0.3
60 AT5G57610 Protein kinase superfamily protein with
octicosapeptide/Phox/Bem1p domain		 -0.67 0.31 -0.33
61 AT1G23830 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 12 plant structures;
EXPRESSED DURING: 9 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G23840.1); Has 57 Blast hits to 52 proteins in 7
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 57; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.67 0.33 -0.32
62 AT2G36320 A20/AN1-like zinc finger family protein 0.66 0.3 -0.31
63 AT1G29700 Metallo-hydrolase/oxidoreductase superfamily protein -0.66 0.3 -0.32
64 AT2G33470 glycolipid transfer protein 1 ARABIDOPSIS GLYCOLIPID TRANSFER
PROTEIN 1, glycolipid transfer
protein 1		 0.66 0.32 -0.32
65 AT3G54130 Josephin family protein 0.66 0.33 -0.29
66 AT5G66680 dolichyl-diphosphooligosaccharide-protein
glycosyltransferase 48kDa subunit family protein		 DEFECTIVE GLYCOSYLATION 0.66 0.29 -0.31
67 AT3G57470 Insulinase (Peptidase family M16) family protein -0.66 0.32 -0.3
68 AT2G16060 hemoglobin 1 hemoglobin 1, ARATH GLB1, ATGLB1,
CLASS I HEMOGLOBIN, hemoglobin 1,
NSHB1		 0.66 0.3 -0.31
69 AT3G14980 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc
finger protein		 -0.66 0.31 -0.32
70 AT2G01140 Aldolase superfamily protein PIGMENT DEFECTIVE 345 0.66 0.32 -0.31
71 AT3G16310 mitotic phosphoprotein N' end (MPPN) family protein 0.65 0.31 -0.33
72 AT5G08335 Isoprenylcysteine carboxyl methyltransferase (ICMT) family ARABIDOPSIS THALIANA ISOPRENYL
CYSTEINE METHYLTRANSFERASE B,
ATSTE14B, ISOPRENYL CYSTEINE
METHYLTRANSFERASE B		 0.65 0.33 -0.3
73 AT1G04950 TATA BOX ASSOCIATED FACTOR II 59 ATTAF6, EMBRYO DEFECTIVE 2781,
TBP-associated factor 6, TATA BOX
ASSOCIATED FACTOR II 59		 -0.65 0.3 -0.32
74 AT1G21050 Protein of unknown function, DUF617 0.65 0.31 -0.33
75 AT3G20710 F-box family protein 0.65 0.32 -0.33
76 AT3G02420 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
membrane; EXPRESSED IN: 25 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0121
(InterPro:IPR005344); Has 72 Blast hits to 71 proteins in
25 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi -
2; Plants - 60; Viruses - 0; Other Eukaryotes - 8 (source:
NCBI BLink).		 0.64 0.33 -0.35
77 AT3G30300 O-fucosyltransferase family protein -0.64 0.3 -0.33
78 AT2G46930 Pectinacetylesterase family protein 0.64 0.3 -0.29
79 AT1G19835 Plant protein of unknown function (DUF869) -0.64 0.31 -0.29
80 AT5G10930 CBL-interacting protein kinase 5 CBL-interacting protein kinase 5,
SNF1-RELATED PROTEIN KINASE 3.24		 -0.64 0.3 -0.33
81 AT5G59090 subtilase 4.12 subtilase 4.12, subtilase 4.12 0.64 0.31 -0.32
82 AT4G18130 phytochrome E phytochrome E -0.64 0.33 -0.3
83 AT4G27970 SLAC1 homologue 2 SLAC1 homologue 2 0.64 0.32 -0.3
84 AT2G40940 ethylene response sensor 1 ETHYLENE RESPONSE SENSOR, ethylene
response sensor 1		 0.64 0.29 -0.31
85 AT5G53540 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.64 0.31 -0.3
86 AT5G49555 FAD/NAD(P)-binding oxidoreductase family protein -0.64 0.31 -0.32
87 AT3G26350 LOCATED IN: chloroplast; EXPRESSED IN: root, pedicel,
carpel, stamen; EXPRESSED DURING: 4 anthesis, petal
differentiation and expansion stage; CONTAINS InterPro
DOMAIN/s: Late embryogenesis abundant protein, group 2
(InterPro:IPR004864); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G13050.1); Has 3534
Blast hits to 2704 proteins in 342 species: Archae - 6;
Bacteria - 192; Metazoa - 1076; Fungi - 505; Plants - 1162;
Viruses - 224; Other Eukaryotes - 369 (source: NCBI BLink).		 -0.64 0.35 -0.3
88 AT4G28706 pfkB-like carbohydrate kinase family protein -0.63 0.3 -0.28
89 AT4G18600 SCAR family protein WASP (WISKOTT-ALDRICH SYNDROME
PROTEIN)-FAMILY VERPROLIN
HOMOLOGOUS PROTEIN 5, SCARL, WAVE5		 -0.63 0.3 -0.32
90 AT5G46830 NACL-inducible gene 1 NACL-INDUCIBLE GENE 1,
NACL-inducible gene 1		 -0.63 0.31 -0.31
91 AT1G76620 Protein of unknown function, DUF547 -0.63 0.31 -0.33
92 AT1G48090 calcium-dependent lipid-binding family protein -0.63 0.31 -0.28
93 AT5G16180 ortholog of maize chloroplast splicing factor CRS1 ARABIDOPSIS ORTHOLOG OF MAIZE
CHLOROPLAST SPLICING FACTOR CRS1,
ortholog of maize chloroplast
splicing factor CRS1		 -0.62 0.31 -0.32
94 ATCG00760 ribosomal protein L36 ribosomal protein L36 -0.62 0.32 -0.31
95 AT2G46180 golgin candidate 4 golgin candidate 4 -0.62 0.32 -0.31
96 AT5G35170 adenylate kinase family protein -0.62 0.32 -0.31
97 AT3G48190 ataxia-telangiectasia mutated ARABIDOPSIS THALIANA
ATAXIA-TELANGIECTASIA MUTATED,
ataxia-telangiectasia mutated, pcd
in male gametogenesis 1		 -0.62 0.31 -0.33
98 AT2G15020 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G64190.1); Has 72 Blast hits
to 72 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.62 0.32 -0.32
99 AT4G36980 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Splicing factor, suppressor of white
apricot (InterPro:IPR019147); Has 7672 Blast hits to 5479
proteins in 321 species: Archae - 0; Bacteria - 89; Metazoa
- 5155; Fungi - 712; Plants - 341; Viruses - 39; Other
Eukaryotes - 1336 (source: NCBI BLink).		 -0.62 0.32 -0.33
100 AT1G16820 vacuolar ATP synthase catalytic subunit-related /
V-ATPase-related / vacuolar proton pump-related		 -0.61 0.32 -0.31
101 ATCG00740 RNA polymerase subunit alpha RNA polymerase subunit alpha -0.61 0.33 -0.31
102 AT3G29390 RS2-interacting KH protein RS2-interacting KH protein -0.61 0.31 -0.32
103 AT2G22390 pseudogene, putative GTP-binding protein, similar to
GTP-binding protein GI:303738 from (Pisum sativum); blastp
match of 75% identity and 3.6e-56 P-value to
GP|303738|dbj|BAA02110.1||D12542 GTP-binding protein {Pisum
sativum}		 ATRABA4E, RAB GTPase homolog A4E -0.61 0.31 -0.32
104 ATCG00780 ribosomal protein L14 ribosomal protein L14 -0.61 0.32 -0.32
105 AT5G20840 Phosphoinositide phosphatase family protein -0.61 0.33 -0.32
106 AT5G02670 BEST Arabidopsis thaliana protein match is: poly(A)
polymerase 3 (TAIR:AT3G06560.1); Has 14 Blast hits to 8
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 14; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.61 0.3 -0.31
107 AT1G01520 Homeodomain-like superfamily protein ALTERED SEED GERMINATION 4 -0.61 0.32 -0.31
108 AT5G09410 ethylene induced calmodulin binding protein calmodulin-binding transcription
activator 1, ethylene induced
calmodulin binding protein		 -0.61 0.31 -0.31
109 ATCG00690 photosystem II reaction center protein T photosystem II reaction center
protein T, PSBTC		 -0.61 0.33 -0.32
110 AT1G21580 Zinc finger C-x8-C-x5-C-x3-H type family protein -0.61 0.3 -0.3
111 ATCG01100 NADH dehydrogenase family protein NDHA -0.6 0.32 -0.31
112 AT1G05200 glutamate receptor 3.4 glutamate receptor 3.4, glutamate
receptor 3.4, GLUR3		 -0.6 0.3 -0.31
113 AT3G27925 DegP protease 1 DegP protease 1, DegP protease 1 -0.6 0.29 -0.33
114 AT1G03550 Secretory carrier membrane protein (SCAMP) family protein -0.6 0.34 -0.34
115 AT3G05830 Encodes alpha-helical IF (intermediate filament)-like
protein.		 -0.6 0.3 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
116 C0184 MST_3110.4 - - - -0.69 0.47 -0.45
117 C0232 Shikimic acid - Shikimate phenylpropanoid biosynthesis,
chorismate biosynthesis,
simple coumarins biosynthesis 		-0.6 0.33 -0.31 C0232