AT3G19090 : -
Query Information
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AGICode AT3G19090
Description RNA-binding protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G19090 RNA-binding protein 1 0.32 -0.31
2 AT5G04200 metacaspase 9 metacaspase 9, metacaspase 2f,
metacaspase 9, metacaspase 2f		 -0.65 0.31 -0.33
3 AT3G24450 Heavy metal transport/detoxification superfamily protein -0.64 0.3 -0.33
4 AT2G29920 unknown protein; Has 14 Blast hits to 9 proteins in 5
species: Archae - 0; Bacteria - 2; Metazoa - 7; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 2 (source: NCBI
BLink).		 0.64 0.34 -0.32
5 AT5G60200 TARGET OF MONOPTEROS 6 TARGET OF MONOPTEROS 6 -0.64 0.3 -0.33
6 AT2G48100 Exonuclease family protein -0.62 0.33 -0.31
7 AT5G47370 Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein HAT2 -0.61 0.33 -0.32
8 AT1G55170 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G14750.1); Has 13439 Blast
hits to 8993 proteins in 828 species: Archae - 344;
Bacteria - 1469; Metazoa - 6958; Fungi - 1008; Plants -
683; Viruses - 29; Other Eukaryotes - 2948 (source: NCBI
BLink).		 0.6 0.32 -0.33
9 AT4G19980 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: root, pedicel; EXPRESSED DURING:
4 anthesis; Has 30201 Blast hits to 17322 proteins in 780
species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.59 0.33 -0.33
10 AT4G27300 S-locus lectin protein kinase family protein 0.58 0.31 -0.32
11 AT5G22540 Plant protein of unknown function (DUF247) 0.58 0.3 -0.31
12 AT5G11610 Exostosin family protein 0.58 0.32 -0.31
13 AT3G57600 Integrase-type DNA-binding superfamily protein 0.58 0.32 -0.32
14 AT3G26760 NAD(P)-binding Rossmann-fold superfamily protein -0.57 0.31 -0.29
15 AT5G54510 Auxin-responsive GH3 family protein DWARF IN LIGHT 1, GH3.6 -0.57 0.34 -0.3
16 AT1G03590 Protein phosphatase 2C family protein -0.57 0.31 -0.33
17 AT3G22680 RNA-DIRECTED DNA METHYLATION 1 RNA-DIRECTED DNA METHYLATION 1 -0.57 0.32 -0.31
18 AT4G26950 Protein of unknown function, DUF584 0.57 0.31 -0.34
19 AT3G62100 indole-3-acetic acid inducible 30 indole-3-acetic acid inducible 30 -0.56 0.32 -0.35
20 AT5G18690 arabinogalactan protein 25 arabinogalactan protein 25,
ARABIDOPSIS THALIANA
ARABINOGALACTAN PROTEINS 25		 -0.56 0.31 -0.3
21 AT1G80100 histidine phosphotransfer protein 6 histidine phosphotransfer protein
6, histidine phosphotransfer
protein 6		 -0.56 0.3 -0.3
22 AT4G34970 actin depolymerizing factor 9 actin depolymerizing factor 9 -0.56 0.32 -0.32
23 AT5G65480 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G38060.2); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 0.55 0.31 -0.31
24 AT1G47570 RING/U-box superfamily protein -0.55 0.33 -0.31
25 AT5G61160 anthocyanin 5-aromatic acyltransferase 1 anthocyanin 5-aromatic
acyltransferase 1		 0.55 0.31 -0.31
26 AT5G63620 GroES-like zinc-binding alcohol dehydrogenase family
protein		 -0.55 0.3 -0.3
27 AT3G49380 IQ-domain 15 IQ-domain 15 -0.54 0.32 -0.33
28 AT1G77270 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G07730.1); Has 428 Blast hits
to 388 proteins in 92 species: Archae - 0; Bacteria - 31;
Metazoa - 189; Fungi - 10; Plants - 97; Viruses - 0; Other
Eukaryotes - 101 (source: NCBI BLink).		 0.54 0.31 -0.31
29 AT2G34960 cationic amino acid transporter 5 cationic amino acid transporter 5 0.54 0.32 -0.31
30 AT2G20950 Arabidopsis phospholipase-like protein (PEARLI 4) family 0.54 0.31 -0.31
31 AT4G25780 CAP (Cysteine-rich secretory proteins, Antigen 5, and
Pathogenesis-related 1 protein) superfamily protein		 -0.54 0.33 -0.33
32 AT3G31320 transposable element gene 0.54 0.32 -0.32
33 AT3G12940 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.53 0.32 -0.32
34 AT4G34870 rotamase cyclophilin 5 ARABIDOPSIS THALIANA CYCLOPHILIN
1, rotamase cyclophilin 5		 -0.53 0.33 -0.32
35 AT5G39430 Protein of unknown function (DUF1336) 0.53 0.3 -0.31
36 AT3G51910 heat shock transcription factor A7A ARABIDOPSIS THALIANA HEAT SHOCK
TRANSCRIPTION FACTOR A7A, heat
shock transcription factor A7A		 -0.53 0.33 -0.31
37 AT5G04770 cationic amino acid transporter 6 ARABIDOPSIS THALIANA CATIONIC
AMINO ACID TRANSPORTER 6, cationic
amino acid transporter 6		 -0.53 0.3 -0.3
38 AT4G04760 Major facilitator superfamily protein 0.52 0.31 -0.31
39 AT5G55090 mitogen-activated protein kinase kinase kinase 15 mitogen-activated protein kinase
kinase kinase 15		 0.52 0.3 -0.31
40 AT5G57950 26S proteasome regulatory subunit, putative 0.52 0.32 -0.32
41 AT1G76950 Regulator of chromosome condensation (RCC1) family with
FYVE zinc finger domain		 PRAF1 0.52 0.31 -0.31
42 AT1G64470 Ubiquitin-like superfamily protein -0.52 0.32 -0.32
43 AT2G26980 CBL-interacting protein kinase 3 CBL-interacting protein kinase 3,
SNF1-RELATED PROTEIN KINASE 3.17		 -0.52 0.32 -0.29
44 AT5G05190 Protein of unknown function (DUF3133) 0.51 0.31 -0.31
45 AT4G17880 Basic helix-loop-helix (bHLH) DNA-binding family protein MYC4 0.51 0.31 -0.3
46 AT5G58830 Subtilisin-like serine endopeptidase family protein 0.51 0.31 -0.32
47 AT1G64460 Protein kinase superfamily protein -0.51 0.33 -0.31
48 AT4G25820 xyloglucan endotransglucosylase/hydrolase 14 ATXTH14, xyloglucan
endotransglucosylase/hydrolase 14,
xyloglucan endotransglycosylase 9		 -0.51 0.32 -0.31
49 AT3G62380 CONTAINS InterPro DOMAIN/s: F-box associated interaction
domain (InterPro:IPR017451); BEST Arabidopsis thaliana
protein match is: F-box family protein (TAIR:AT1G71320.1);
Has 422 Blast hits to 419 proteins in 26 species: Archae -
0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 420;
Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).		 0.5 0.32 -0.31
50 AT1G47220 Cyclin A3;3 Cyclin A3;3 0.5 0.28 -0.32
51 AT1G48930 glycosyl hydrolase 9C1 glycosyl hydrolase 9C1, glycosyl
hydrolase 9C1		 -0.5 0.32 -0.32
52 AT1G33700 Beta-glucosidase, GBA2 type family protein -0.5 0.32 -0.32
53 AT3G55930 Pre-mRNA-splicing factor 3 0.49 0.32 -0.34
54 AT2G23830 PapD-like superfamily protein 0.49 0.3 -0.32
55 AT4G03870 transposable element gene 0.49 0.34 -0.32
56 AT2G32000 DNA topoisomerase, type IA, core 0.49 0.3 -0.31
57 AT3G50200 Plant protein of unknown function (DUF247) -0.49 0.31 -0.33
58 AT3G13450 Transketolase family protein DARK INDUCIBLE 4 -0.49 0.31 -0.3
59 AT1G79370 cytochrome P450, family 79, subfamily C, polypeptide 1 cytochrome P450, family 79,
subfamily C, polypeptide 1		 0.48 0.3 -0.32
60 AT4G16730 terpene synthase 02 terpene synthase 02 0.48 0.34 -0.32
61 AT1G23250 Caleosin-related family protein 0.47 0.34 -0.33
62 AT3G06180 Ribosomal protein L34e superfamily protein 0.47 0.3 -0.31
63 AT3G03090 vacuolar glucose transporter 1 vacuolar glucose transporter 1,
vacuolar glucose transporter 1		 0.47 0.31 -0.31
64 AT1G75140 unknown protein; LOCATED IN: endoplasmic reticulum;
EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13
growth stages; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT1G19370.1); Has 51 Blast hits to 49
proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes -
5 (source: NCBI BLink).		 0.47 0.31 -0.31
65 AT1G14770 RING/FYVE/PHD zinc finger superfamily protein -0.47 0.34 -0.3
66 AT1G21190 Small nuclear ribonucleoprotein family protein -0.47 0.31 -0.33
67 AT5G05050 Cysteine proteinases superfamily protein 0.47 0.29 -0.29
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
68 C0103 Glutaric acid - - - -0.77 0.44 -0.47