AGICode | AT3G13580 |
Description | Ribosomal protein L30/L7 family protein |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT3G13580 | Ribosomal protein L30/L7 family protein | 1 | 0.31 | -0.3 | |||
2 | AT3G04230 | Ribosomal protein S5 domain 2-like superfamily protein | 0.77 | 0.33 | -0.32 | |||
3 | AT1G14620 | decoy | DECOY | 0.77 | 0.31 | -0.32 | ||
4 | AT3G15350 | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
-0.76 | 0.32 | -0.32 | |||
5 | AT3G61890 | homeobox 12 | homeobox 12, ARABIDOPSIS THALIANA HOMEOBOX 12, homeobox 12 |
-0.76 | 0.31 | -0.31 | ||
6 | AT3G57550 | guanylate kinase | guanylate kinase, GUANYLATE KINAS 2 |
0.76 | 0.33 | -0.32 | ||
7 | AT5G39600 | CONTAINS InterPro DOMAIN/s: Ribosomal protein L53, mitochondrial (InterPro:IPR019716); Has 50 Blast hits to 50 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
0.75 | 0.32 | -0.32 | |||
8 | AT2G17440 | plant intracellular ras group-related LRR 5 | plant intracellular ras group-related LRR 5 |
0.75 | 0.31 | -0.33 | ||
9 | AT5G57610 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain |
-0.75 | 0.32 | -0.32 | |||
10 | AT4G18270 | translocase 11 | ARABIDOPSIS THALIANA TRANSLOCASE 11, translocase 11 |
-0.75 | 0.29 | -0.33 | ||
11 | AT1G76020 | Thioredoxin superfamily protein | -0.74 | 0.31 | -0.34 | |||
12 | AT3G01790 | Ribosomal protein L13 family protein | 0.74 | 0.32 | -0.33 | |||
13 | AT2G29530 | Tim10/DDP family zinc finger protein | TIM10 | 0.73 | 0.31 | -0.3 | ||
14 | AT3G20000 | translocase of the outer mitochondrial membrane 40 | translocase of the outer mitochondrial membrane 40 |
0.73 | 0.32 | -0.31 | ||
15 | AT5G09770 | Ribosomal protein L17 family protein | 0.73 | 0.34 | -0.31 | |||
16 | AT1G68570 | Major facilitator superfamily protein | -0.73 | 0.32 | -0.29 | |||
17 | AT4G02630 | Protein kinase superfamily protein | -0.73 | 0.3 | -0.31 | |||
18 | AT1G72750 | translocase inner membrane subunit 23-2 | translocase inner membrane subunit 23-2, translocase inner membrane subunit 23-2 |
0.72 | 0.31 | -0.31 | ||
19 | AT1G70900 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G23110.4); Has 57 Blast hits to 57 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.72 | 0.32 | -0.3 | |||
20 | AT1G75660 | 5'-3' exoribonuclease 3 | 5'-3' EXORIBONUCLEASE 3, 5'-3' exoribonuclease 3 |
0.72 | 0.31 | -0.32 | ||
21 | AT1G18870 | isochorismate synthase 2 | ARABIDOPSIS ISOCHORISMATE SYNTHASE 2, isochorismate synthase 2 |
-0.71 | 0.31 | -0.32 | ||
22 | AT5G56940 | Ribosomal protein S16 family protein | 0.71 | 0.32 | -0.32 | |||
23 | AT5G17520 | root cap 1 (RCP1) | MALTOSE EXCESS 1, ROOT CAP 1 | -0.71 | 0.31 | -0.3 | ||
24 | AT5G61880 | Protein Transporter, Pam16 | 0.71 | 0.33 | -0.3 | |||
25 | AT3G56050 | Protein kinase family protein | -0.7 | 0.31 | -0.32 | |||
26 | AT1G73940 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G49410.2); Has 54 Blast hits to 54 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 54; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.7 | 0.3 | -0.34 | |||
27 | AT1G28230 | purine permease 1 | ATPUP1, purine permease 1 | -0.7 | 0.31 | -0.31 | ||
28 | AT3G18490 | Eukaryotic aspartyl protease family protein | -0.7 | 0.3 | -0.33 | |||
29 | AT2G44270 | repressor of lrx1 | repressor of lrx1 | 0.7 | 0.34 | -0.29 | ||
30 | AT2G41190 | Transmembrane amino acid transporter family protein | -0.7 | 0.31 | -0.33 | |||
31 | AT1G70190 | Ribosomal protein L7/L12, oligomerisation;Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like |
0.69 | 0.3 | -0.31 | |||
32 | AT4G23600 | Tyrosine transaminase family protein | CORONATINE INDUCED 1, JASMONIC ACID RESPONSIVE 2 |
-0.69 | 0.32 | -0.35 | ||
33 | AT4G10090 | elongator protein 6 | elongator protein 6 | 0.69 | 0.31 | -0.29 | ||
34 | AT1G29395 | COLD REGULATED 314 INNER MEMBRANE 1 | COLD REGULATED 314 THYLAKOID MEMBRANE 1, COLD REGULATED 314 INNER MEMBRANE 1, cold regulated 414 thylakoid membrane 1 |
-0.69 | 0.32 | -0.29 | ||
35 | AT4G32940 | gamma vacuolar processing enzyme | gamma vacuolar processing enzyme, GAMMAVPE |
-0.69 | 0.32 | -0.32 | ||
36 | AT4G19390 | Uncharacterised protein family (UPF0114) | -0.68 | 0.33 | -0.33 | |||
37 | AT5G01820 | serine/threonine protein kinase 1 | ATCIPK14, serine/threonine protein kinase 1, CBL-INTERACTING PROTEIN KINASE 14, SOS2-like protein kinase 24, SNF1-RELATED PROTEIN KINASE 3.15, serine/threonine protein kinase 1 |
-0.68 | 0.31 | -0.31 | ||
38 | AT4G39200 | Ribosomal protein S25 family protein | 0.68 | 0.3 | -0.31 | |||
39 | AT1G21590 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain |
-0.68 | 0.32 | -0.32 | |||
40 | AT4G14760 | kinase interacting (KIP1-like) family protein | -0.68 | 0.33 | -0.31 | |||
41 | AT2G37130 | Peroxidase superfamily protein | 0.67 | 0.34 | -0.32 | |||
42 | AT2G42530 | cold regulated 15b | cold regulated 15b | -0.67 | 0.31 | -0.32 | ||
43 | AT3G54920 | Pectin lyase-like superfamily protein | powdery mildew resistant 6 | 0.67 | 0.34 | -0.34 | ||
44 | AT2G19780 | Leucine-rich repeat (LRR) family protein | -0.67 | 0.32 | -0.32 | |||
45 | AT3G18510 | unknown protein; Has 15 Blast hits to 15 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 15; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.67 | 0.31 | -0.34 | |||
46 | AT1G12990 | beta-1,4-N-acetylglucosaminyltransferase family protein | -0.67 | 0.31 | -0.29 | |||
47 | AT4G15700 | Thioredoxin superfamily protein | 0.67 | 0.32 | -0.32 | |||
48 | AT2G34900 | Transcription factor GTE6 | GTE01, GLOBAL TRANSCRIPTION FACTOR GROUP E1, IMBIBITION-INDUCIBLE 1 |
0.67 | 0.31 | -0.35 | ||
49 | AT1G09760 | U2 small nuclear ribonucleoprotein A | U2 small nuclear ribonucleoprotein A |
0.67 | 0.3 | -0.3 | ||
50 | AT1G24735 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
-0.67 | 0.31 | -0.31 | |||
51 | AT4G26110 | nucleosome assembly protein1;1 | ARABIDOPSIS THALIANA NUCLEOSOME ASSEMLY PROTEIN 1;1, nucleosome assembly protein1;1 |
0.67 | 0.31 | -0.32 | ||
52 | AT1G57870 | shaggy-like kinase 42 | shaggy-like kinase 42, shaggy-like kinase 42 |
-0.67 | 0.3 | -0.31 | ||
53 | AT1G20430 | unknown protein; Has 29 Blast hits to 29 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 29; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.66 | 0.31 | -0.29 | |||
54 | AT5G11060 | KNOTTED1-like homeobox gene 4 | KNOTTED1-like homeobox gene 4 | -0.66 | 0.31 | -0.3 | ||
55 | AT5G14120 | Major facilitator superfamily protein | 0.66 | 0.31 | -0.33 | |||
56 | AT4G34770 | SAUR-like auxin-responsive protein family | 0.66 | 0.31 | -0.31 | |||
57 | AT4G11240 | Calcineurin-like metallo-phosphoesterase superfamily protein |
TOPP7 | 0.66 | 0.31 | -0.32 | ||
58 | AT1G75900 | GDSL-like Lipase/Acylhydrolase superfamily protein | -0.66 | 0.3 | -0.31 | |||
59 | AT4G15680 | Thioredoxin superfamily protein | 0.66 | 0.32 | -0.33 | |||
60 | AT5G61810 | Mitochondrial substrate carrier family protein | ATP/phosphate carrier 1 | -0.66 | 0.31 | -0.33 | ||
61 | AT5G49210 | unknown protein; Has 3675 Blast hits to 2315 proteins in 312 species: Archae - 2; Bacteria - 342; Metazoa - 1190; Fungi - 281; Plants - 114; Viruses - 4; Other Eukaryotes - 1742 (source: NCBI BLink). |
0.66 | 0.32 | -0.31 | |||
62 | AT2G23760 | BEL1-like homeodomain 4 | BEL1-like homeodomain 4, SAWTOOTH 2 |
-0.66 | 0.33 | -0.33 | ||
63 | AT3G05030 | sodium hydrogen exchanger 2 | ATNHX2, sodium hydrogen exchanger 2 |
-0.65 | 0.31 | -0.3 | ||
64 | AT1G62710 | beta vacuolar processing enzyme | beta vacuolar processing enzyme, BETAVPE |
-0.65 | 0.32 | -0.32 | ||
65 | AT3G25150 | Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain |
0.65 | 0.32 | -0.29 | |||
66 | AT5G59440 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
ARABIDOPSIS THALIANA THYMIDYLATE KINASE.1, ARABIDOPSIS THALIANA THYMIDYLATE KINASE.2, ZEUS1 |
0.65 | 0.32 | -0.3 | ||
67 | AT5G20820 | SAUR-like auxin-responsive protein family | 0.65 | 0.32 | -0.31 | |||
68 | AT3G16360 | HPT phosphotransmitter 4 | HPT phosphotransmitter 4 | -0.65 | 0.31 | -0.3 | ||
69 | AT1G55880 | Pyridoxal-5'-phosphate-dependent enzyme family protein | 0.65 | 0.31 | -0.33 | |||
70 | AT1G07720 | 3-ketoacyl-CoA synthase 3 | 3-ketoacyl-CoA synthase 3 | -0.64 | 0.3 | -0.3 | ||
71 | AT2G21590 | Glucose-1-phosphate adenylyltransferase family protein | APL4 | -0.64 | 0.33 | -0.31 | ||
72 | AT4G26490 | Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family |
-0.64 | 0.31 | -0.31 | |||
73 | AT5G19180 | E1 C-terminal related 1 | E1 C-terminal related 1 | 0.64 | 0.32 | -0.34 | ||
74 | AT3G62700 | multidrug resistance-associated protein 10 | ATP-binding cassette C14, multidrug resistance-associated protein 10, multidrug resistance-associated protein 10 |
-0.64 | 0.32 | -0.31 | ||
75 | AT5G53980 | homeobox protein 52 | homeobox protein 52, homeobox protein 52 |
0.64 | 0.32 | -0.33 | ||
76 | AT5G02620 | ankyrin-like1 | ankyrin-like1, ATANK1 | -0.64 | 0.32 | -0.31 | ||
77 | AT5G37180 | sucrose synthase 5 | ARABIDOPSIS THALIANA SUCROSE SYNTHASE 5, sucrose synthase 5 |
-0.63 | 0.31 | -0.31 | ||
78 | AT3G56260 | unknown protein; Has 20 Blast hits to 19 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 2; Plants - 10; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). |
-0.63 | 0.31 | -0.34 | |||
79 | AT4G14090 | UDP-Glycosyltransferase superfamily protein | -0.63 | 0.33 | -0.31 | |||
80 | AT5G62130 | Per1-like family protein | -0.63 | 0.29 | -0.32 | |||
81 | AT5G52310 | low-temperature-responsive protein 78 (LTI78) / desiccation-responsive protein 29A (RD29A) |
COLD REGULATED 78, LTI140, LOW-TEMPERATURE-INDUCED 78, RESPONSIVE TO DESSICATION 29A |
-0.63 | 0.32 | -0.33 | ||
82 | AT2G36640 | embryonic cell protein 63 | embryonic cell protein 63, embryonic cell protein 63 |
-0.63 | 0.3 | -0.29 | ||
83 | AT5G14800 | pyrroline-5- carboxylate (P5C) reductase | AT-P5C1, PYRROLINE-5- CARBOXYLATE (P5C) REDUCTASE, EMBRYO DEFECTIVE 2772, pyrroline-5- carboxylate (P5C) reductase |
0.63 | 0.32 | -0.32 | ||
84 | AT2G26600 | Glycosyl hydrolase superfamily protein | -0.62 | 0.34 | -0.3 | |||
85 | AT5G15610 | Proteasome component (PCI) domain protein | 0.62 | 0.31 | -0.31 | |||
86 | AT5G15630 | COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family |
COBRA-LIKE4, IRREGULAR XYLEM 6 | -0.62 | 0.32 | -0.3 | ||
87 | AT1G56600 | galactinol synthase 2 | galactinol synthase 2, galactinol synthase 2 |
-0.62 | 0.31 | -0.31 | ||
88 | AT4G00830 | RNA-binding (RRM/RBD/RNP motifs) family protein | LHP1-Interacting Factor 2 | 0.62 | 0.32 | -0.31 | ||
89 | AT3G15650 | alpha/beta-Hydrolases superfamily protein | -0.62 | 0.32 | -0.31 | |||
90 | AT4G21940 | calcium-dependent protein kinase 15 | calcium-dependent protein kinase 15 |
-0.62 | 0.33 | -0.33 | ||
91 | AT4G15900 | pleiotropic regulatory locus 1 | pleiotropic regulatory locus 1 | 0.62 | 0.3 | -0.32 | ||
92 | AT5G25610 | BURP domain-containing protein | ATRD22, RESPONSIVE TO DESSICATION 22 |
-0.62 | 0.33 | -0.34 | ||
93 | AT4G22740 | glycine-rich protein | -0.62 | 0.32 | -0.32 | |||
94 | AT1G56710 | Pectin lyase-like superfamily protein | -0.61 | 0.3 | -0.31 | |||
95 | AT1G48100 | Pectin lyase-like superfamily protein | -0.61 | 0.32 | -0.32 | |||
96 | AT2G46630 | unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 110095 Blast hits to 59224 proteins in 2216 species: Archae - 177; Bacteria - 15429; Metazoa - 38345; Fungi - 18843; Plants - 13341; Viruses - 3084; Other Eukaryotes - 20876 (source: NCBI BLink). |
-0.61 | 0.31 | -0.3 | |||
97 | AT1G75410 | BEL1-like homeodomain 3 | BEL1-like homeodomain 3 | -0.61 | 0.3 | -0.3 | ||
98 | AT5G43150 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.61 | 0.31 | -0.29 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
99 | C0057 | Anthranilic acid | - | Anthranilate | tryptophan biosynthesis, benzoylanthranilate biosynthesis |
-0.9 | 0.43 | -0.44 | ||
100 | C0017 | sn-Glycero-3-phosphocholine | sn-Glycero-3-phosphocholine | L-1-Glycero-3-phosphocholine | - | -0.81 | 0.45 | -0.44 | ||
101 | C0216 | Proline | L-Proline | L-Proline | proline degradation II, arginine degradation VI (arginase 2 pathway), L-Ndelta-acetylornithine biosynthesis, tRNA charging, citrulline biosynthesis, proline biosynthesis III |
-0.74 | 0.3 | -0.3 | ||
102 | C0015 | p-Coumaric acid | - | 4-Coumarate | scopoletin biosynthesis, free phenylpropanoid acid biosynthesis, phenylpropanoid biosynthesis, simple coumarins biosynthesis, 4-hydroxybenzoate biosynthesis V, suberin biosynthesis, phenylpropanoid biosynthesis, initial reactions, flavonoid biosynthesis |
-0.73 | 0.43 | -0.45 | ||
103 | C0143 | Maltitol | - | - | starch degradation II | -0.64 | 0.46 | -0.46 | ||
104 | C0103 | Glutaric acid | - | - | - | 0.64 | 0.46 | -0.49 | ||
105 | C0094 | Galactosamine | D-Galactosamine | - | - | -0.62 | 0.46 | -0.44 |