AT3G13620 : -
Query Information
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AGICode AT3G13620
Description Amino acid permease family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G13620 Amino acid permease family protein 1 0.31 -0.31
2 AT2G28050 Pentatricopeptide repeat (PPR) superfamily protein -0.83 0.3 -0.33
3 AT1G16840 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G78890.1); Has 71 Blast hits
to 71 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.78 0.34 -0.31
4 AT1G53840 pectin methylesterase 1 pectin methylesterase 1, pectin
methylesterase 1		 0.77 0.31 -0.3
5 AT1G24280 glucose-6-phosphate dehydrogenase 3 glucose-6-phosphate dehydrogenase
3		 -0.77 0.31 -0.31
6 AT1G17744 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: stem; Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.77 0.32 -0.31
7 AT4G13650 Pentatricopeptide repeat (PPR) superfamily protein -0.76 0.31 -0.32
8 AT3G14070 cation exchanger 9 CATION CALCIUM EXCHANGER 3, cation
exchanger 9, CATION CALCIUM
EXCHANGER 3		 0.75 0.29 -0.3
9 AT4G37540 LOB domain-containing protein 39 LOB domain-containing protein 39 -0.75 0.3 -0.29
10 AT1G18340 basal transcription factor complex subunit-related -0.75 0.34 -0.32
11 AT5G59680 Leucine-rich repeat protein kinase family protein -0.74 0.3 -0.3
12 AT4G17670 Protein of unknown function (DUF581) 0.72 0.33 -0.32
13 AT1G66100 Plant thionin 0.72 0.31 -0.31
14 AT4G35480 RING-H2 finger A3B RING-H2 finger A3B 0.72 0.29 -0.35
15 AT3G10210 SEC14 cytosolic factor family protein / phosphoglyceride
transfer family protein		 0.72 0.33 -0.3
16 AT4G35110 Arabidopsis phospholipase-like protein (PEARLI 4) family 0.72 0.32 -0.33
17 AT3G29670 HXXXD-type acyl-transferase family protein phenolic glucoside
malonyltransferase 2		 0.72 0.34 -0.32
18 AT2G36210 SAUR-like auxin-responsive protein family -0.71 0.33 -0.34
19 AT5G27910 nuclear factor Y, subunit C8 nuclear factor Y, subunit C8 -0.71 0.31 -0.31
20 AT5G58150 Leucine-rich repeat protein kinase family protein -0.71 0.32 -0.34
21 AT4G18530 Protein of unknown function (DUF707) 0.71 0.33 -0.3
22 AT2G32510 mitogen-activated protein kinase kinase kinase 17 mitogen-activated protein kinase
kinase kinase 17		 0.71 0.32 -0.31
23 AT3G07360 plant U-box 9 ARABIDOPSIS THALIANA PLANT U-BOX
9, plant U-box 9		 0.7 0.32 -0.33
24 AT2G27140 HSP20-like chaperones superfamily protein 0.7 0.31 -0.32
25 AT5G65450 ubiquitin-specific protease 17 ubiquitin-specific protease 17 -0.69 0.33 -0.33
26 AT1G33410 SUPPRESSOR OF AUXIN RESISTANCE1 ARABIDOPSIS NUCLEOPORIN 160,
NUCLEOPORIN 160, SUPPRESSOR OF
AUXIN RESISTANCE1		 -0.69 0.33 -0.31
27 AT3G49510 F-box family protein 0.69 0.31 -0.28
28 AT3G19510 Homeodomain-like protein with RING/FYVE/PHD-type zinc
finger domain		 HAT3.1 -0.69 0.3 -0.32
29 AT3G53370 S1FA-like DNA-binding protein 0.69 0.31 -0.33
30 AT2G05900 SET domain protein 11 SET domain protein 11, SU(VAR)3-9
HOMOLOG 10		 -0.69 0.31 -0.3
31 AT1G17930 Aminotransferase-like, plant mobile domain family protein 0.69 0.31 -0.32
32 AT5G40170 receptor like protein 54 receptor like protein 54, receptor
like protein 54		 0.68 0.31 -0.29
33 AT1G02050 Chalcone and stilbene synthase family protein LESS ADHESIVE POLLEN 6 -0.68 0.31 -0.3
34 AT3G49740 Tetratricopeptide repeat (TPR)-like superfamily protein -0.68 0.31 -0.31
35 AT1G08340 Rho GTPase activating protein with PAK-box/P21-Rho-binding
domain		 0.68 0.3 -0.31
36 AT3G01400 ARM repeat superfamily protein 0.68 0.31 -0.31
37 AT4G37170 Pentatricopeptide repeat (PPR) superfamily protein -0.68 0.3 -0.31
38 AT3G13820 F-box and associated interaction domains-containing protein -0.68 0.31 -0.3
39 AT4G26480 RNA-binding KH domain-containing protein -0.68 0.29 -0.31
40 AT5G27660 Trypsin family protein with PDZ domain -0.68 0.31 -0.32
41 AT5G02550 unknown protein; Has 3 Blast hits to 3 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.68 0.3 -0.29
42 AT1G15230 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; Has 26
Blast hits to 26 proteins in 12 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.68 0.34 -0.33
43 AT2G33700 Protein phosphatase 2C family protein 0.68 0.32 -0.31
44 AT2G23270 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: stem, sperm cell, root,
stamen; EXPRESSED DURING: 4 anthesis; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT4G37290.1); Has 36 Blast hits to 35 proteins in 6
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.67 0.32 -0.32
45 AT3G17100 sequence-specific DNA binding transcription factors 0.67 0.32 -0.33
46 AT4G10790 UBX domain-containing protein 0.67 0.29 -0.31
47 AT2G18750 Calmodulin-binding protein 0.67 0.3 -0.31
48 AT2G31740 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.67 0.33 -0.34
49 AT5G22630 arogenate dehydratase 5 arogenate dehydratase 5 0.67 0.31 -0.32
50 AT3G50900 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G66490.1); Has 45 Blast hits
to 45 proteins in 7 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.67 0.32 -0.32
51 AT1G48095 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G36960.1); Has 82 Blast hits
to 82 proteins in 3 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.67 0.32 -0.3
52 AT3G17860 jasmonate-zim-domain protein 3 JASMONATE-INSENSITIVE 3,
jasmonate-zim-domain protein 3,
TIFY6B		 0.67 0.31 -0.32
53 AT5G17140 Cysteine proteinases superfamily protein -0.67 0.32 -0.31
54 AT4G23950 Galactose-binding protein -0.67 0.31 -0.29
55 AT5G17490 RGA-like protein 3 AtRGL3, RGA-like protein 3 0.67 0.33 -0.33
56 AT2G40810 homolog of yeast autophagy 18C homolog of yeast autophagy 18C,
homolog of yeast autophagy 18C		 0.67 0.32 -0.31
57 AT2G35390 Phosphoribosyltransferase family protein -0.67 0.34 -0.31
58 AT5G34900 transposable element gene -0.67 0.31 -0.33
59 AT3G53240 receptor like protein 45 receptor like protein 45, receptor
like protein 45		 -0.66 0.32 -0.32
60 AT3G16800 Protein phosphatase 2C family protein 0.66 0.32 -0.31
61 AT3G44510 alpha/beta-Hydrolases superfamily protein -0.66 0.31 -0.31
62 AT1G14020 O-fucosyltransferase family protein -0.66 0.36 -0.32
63 AT5G59340 WUSCHEL related homeobox 2 WUSCHEL related homeobox 2 -0.66 0.35 -0.29
64 AT3G03870 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G18130.1); Has 41 Blast hits
to 41 proteins in 11 species: Archae - 0; Bacteria - 0;
Metazoa - 2; Fungi - 0; Plants - 39; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.66 0.33 -0.31
65 AT5G08139 RING/U-box superfamily protein 0.66 0.29 -0.29
66 AT1G78320 glutathione S-transferase TAU 23 glutathione S-transferase TAU 23,
glutathione S-transferase TAU 23		 -0.66 0.29 -0.31
67 AT1G50630 Protein of unknown function (DUF3537) 0.66 0.34 -0.31
68 AT2G24120 DNA/RNA polymerases superfamily protein PIGMENT DEFECTIVE 319, SCABRA 3 -0.66 0.31 -0.31
69 AT5G19140 Aluminium induced protein with YGL and LRDR motifs AILP1, ATAILP1 0.66 0.32 -0.3
70 AT2G46300 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 0.66 0.34 -0.3
71 AT1G10010 amino acid permease 8 amino acid permease 8, ATAAP8 0.66 0.33 -0.31
72 AT2G14040 transposable element gene -0.66 0.31 -0.33
73 AT2G02980 Pentatricopeptide repeat (PPR) superfamily protein ORGANELLE TRANSCRIPT PROCESSING 85 -0.66 0.32 -0.32
74 AT1G03620 ELMO/CED-12 family protein -0.66 0.33 -0.31
75 AT3G61350 SKP1 interacting partner 4 SKP1 interacting partner 4 0.66 0.3 -0.32
76 AT1G49370 pseudogene, similar to OSJNBa0072F16.8, blastp match of 42%
identity and 6.6e-73 P-value to
GP|21739229|emb|CAD40984.1||AL606460 OSJNBa0072F16.8 {Oryza
sativa (japonica cultivar-group)}		 -0.65 0.34 -0.3
77 AT3G14430 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: response to oxidative stress; LOCATED IN:
mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; Has 16 Blast hits to 16 proteins
in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 16; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.65 0.3 -0.34
78 AT3G04970 DHHC-type zinc finger family protein 0.65 0.31 -0.31
79 AT1G76350 Plant regulator RWP-RK family protein 0.65 0.3 -0.33
80 AT3G10890 Glycosyl hydrolase superfamily protein 0.65 0.3 -0.29
81 AT3G57680 Peptidase S41 family protein 0.65 0.31 -0.31
82 AT1G15950 cinnamoyl coa reductase 1 ATCCR1, cinnamoyl coa reductase 1,
IRREGULAR XYLEM 4		 0.65 0.31 -0.32
83 AT1G08080 alpha carbonic anhydrase 7 alpha carbonic anhydrase 7, A.
THALIANA ALPHA CARBONIC ANHYDRASE
7		 -0.65 0.33 -0.31
84 AT3G21270 DOF zinc finger protein 2 DOF zinc finger protein 2, DOF
zinc finger protein 2		 0.65 0.32 -0.31
85 AT3G46130 myb domain protein 48 myb domain protein 48, ATMYB48-1,
ATMYB48-2, ATMYB48-3, myb domain
protein 48		 -0.65 0.31 -0.33
86 AT1G74600 pentatricopeptide (PPR) repeat-containing protein organelle transcript processing 87 -0.65 0.3 -0.32
87 AT3G54850 plant U-box 14 ATPUB14, plant U-box 14 0.64 0.31 -0.31
88 AT3G07860 Ubiquitin-like superfamily protein -0.64 0.28 -0.33
89 AT1G13050 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G26350.1); Has 538 Blast hits
to 510 proteins in 88 species: Archae - 0; Bacteria - 23;
Metazoa - 81; Fungi - 36; Plants - 361; Viruses - 8; Other
Eukaryotes - 29 (source: NCBI BLink).		 -0.64 0.3 -0.31
90 AT4G38780 Pre-mRNA-processing-splicing factor -0.64 0.3 -0.31
91 AT1G21210 wall associated kinase 4 wall associated kinase 4 -0.64 0.32 -0.33
92 AT1G04880 HMG (high mobility group) box protein with ARID/BRIGHT
DNA-binding domain		 -0.64 0.3 -0.31
93 AT4G37840 hexokinase-like 3 hexokinase-like 3 -0.64 0.33 -0.29
94 AT2G32410 AXR1-like AXR1-like, AXR1- like 1 0.64 0.32 -0.32
95 AT3G51200 SAUR-like auxin-responsive protein family -0.64 0.29 -0.31
96 AT2G04038 basic leucine-zipper 48 basic leucine-zipper 48, basic
leucine-zipper 48		 0.64 0.32 -0.31
97 AT4G04420 transposable element gene -0.64 0.32 -0.31
98 AT5G28700 transposable element gene -0.64 0.3 -0.31
99 AT1G50180 NB-ARC domain-containing disease resistance protein -0.63 0.32 -0.34
100 AT4G35370 Transducin/WD40 repeat-like superfamily protein -0.63 0.28 -0.33
101 AT1G49160 Protein kinase superfamily protein WNK7 -0.63 0.31 -0.31
102 AT3G22750 Protein kinase superfamily protein -0.63 0.32 -0.32
103 AT4G07586 transposable element gene -0.63 0.32 -0.34
104 AT5G24340 3'-5' exonuclease domain-containing protein -0.63 0.32 -0.32
105 AT5G40440 mitogen-activated protein kinase kinase 3 mitogen-activated protein kinase
kinase 3, mitogen-activated
protein kinase kinase 3		 0.63 0.33 -0.32
106 AT1G18610 Galactose oxidase/kelch repeat superfamily protein -0.63 0.31 -0.32
107 AT2G36070 translocase inner membrane subunit 44-2 translocase inner membrane subunit
44-2, translocase inner membrane
subunit 44-2		 -0.63 0.31 -0.31
108 AT5G38460 ALG6, ALG8 glycosyltransferase family -0.63 0.32 -0.33
109 AT5G01930 Glycosyl hydrolase superfamily protein AtMAN6, endo-beta-mannase 6 0.63 0.3 -0.3
110 AT5G19490 Histone superfamily protein 0.63 0.31 -0.31
111 AT1G18070 Translation elongation factor EF1A/initiation factor
IF2gamma family protein		 -0.63 0.32 -0.32
112 AT5G38820 Transmembrane amino acid transporter family protein -0.63 0.31 -0.31
113 AT3G30570 transposable element gene -0.63 0.31 -0.32
114 AT1G59990 DEA(D/H)-box RNA helicase family protein EMBRYO DEFECTIVE 3108, RNA
helicase 22		 -0.62 0.31 -0.33
115 AT5G17510 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G03460.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.62 0.31 -0.31
116 AT1G11780 oxidoreductase, 2OG-Fe(II) oxygenase family protein -0.62 0.3 -0.3
117 AT5G27190 transposable element gene -0.62 0.33 -0.31
118 AT5G26830 Threonyl-tRNA synthetase -0.62 0.32 -0.31
119 AT2G47850 Zinc finger C-x8-C-x5-C-x3-H type family protein -0.62 0.3 -0.33
120 AT1G51270 structural molecules;transmembrane receptors;structural
molecules		 -0.62 0.31 -0.33
121 AT5G66240 Transducin/WD40 repeat-like superfamily protein -0.62 0.3 -0.31
122 AT2G19420 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.62 0.32 -0.34
123 AT5G53080 Tetratricopeptide repeat (TPR)-like superfamily protein -0.62 0.31 -0.35
124 AT3G26140 Cellulase (glycosyl hydrolase family 5) protein -0.62 0.32 -0.31
125 AT1G34210 somatic embryogenesis receptor-like kinase 2 ATSERK2, somatic embryogenesis
receptor-like kinase 2		 -0.61 0.33 -0.32
126 AT5G38340 Disease resistance protein (TIR-NBS-LRR class) family -0.61 0.32 -0.32
127 AT2G36720 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc
finger domain		 -0.61 0.32 -0.3
128 AT1G16950 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: stamen; EXPRESSED
DURING: 4 anthesis; Has 17 Blast hits to 17 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 17; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.61 0.32 -0.34
129 AT1G23160 Auxin-responsive GH3 family protein -0.61 0.3 -0.3
130 AT4G13060 F-box associated ubiquitination effector family protein -0.61 0.32 -0.32
131 AT4G38170 FAR1-related sequence 9 FAR1-related sequence 9 -0.61 0.32 -0.32
132 AT1G03170 Protein of unknown function (DUF3049) FANTASTIC FOUR 2 -0.61 0.31 -0.33
133 AT5G39700 myb domain protein 89 myb domain protein 89, myb domain
protein 89		 -0.61 0.3 -0.31
134 AT1G39430 transposable element gene -0.61 0.31 -0.33
135 AT1G34160 Tetratricopeptide repeat (TPR)-like superfamily protein -0.61 0.3 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
136 C0028 3-Aminopiperidin-2-one (R,S)-3-Aminopiperidin-2-one - - -0.74 0.31 -0.3
137 C0252 Threonic acid D,L-Threonic acid L-Threonate ascorbic acid degradation 0.7 0.48 -0.46 C0252
138 C0004 β-Alanine - β-Alanine uracil degradation II (reductive),
pantothenate biosynthesis,
beta-alanine biosynthesis II,
beta-alanine biosynthesis I 		0.69 0.33 -0.34 C0004