AT3G12060 : TRICHOME BIREFRINGENCE-LIKE 1
Query Information
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AGICode AT3G12060
Description Plant protein of unknown function (DUF828)
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G12060 Plant protein of unknown function (DUF828) TRICHOME BIREFRINGENCE-LIKE 1 1 0.33 -0.31
2 AT4G02430 RNA-binding (RRM/RBD/RNP motifs) family protein Serine/Arginine-Rich Protein
Splicing Factor 34b,
Serine/Arginine-Rich Protein
Splicing Factor 34b		 -0.64 0.3 -0.31
3 AT5G02680 LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant
structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: methionine--tRNA
ligase, putative / methionyl-tRNA synthetase, putative /
MetRS, putative (TAIR:AT4G13780.1); Has 252 Blast hits to
252 proteins in 89 species: Archae - 0; Bacteria - 71;
Metazoa - 93; Fungi - 0; Plants - 74; Viruses - 0; Other
Eukaryotes - 14 (source: NCBI BLink).		 -0.61 0.31 -0.33
4 AT3G16980 RNA polymerases M/15 Kd subunit NRPB9A, NRPD9A, NRPE9A 0.61 0.3 -0.29
5 AT5G15250 FTSH protease 6 ATFTSH6, FTSH protease 6 -0.6 0.33 -0.31
6 AT1G66170 RING/FYVE/PHD zinc finger superfamily protein MALE MEIOCYTE DEATH 1 -0.6 0.32 -0.31
7 AT1G69040 ACT domain repeat 4 ACT domain repeat 4 0.6 0.32 -0.32
8 AT1G15960 NRAMP metal ion transporter 6 ATNRAMP6, NRAMP metal ion
transporter 6		 -0.6 0.32 -0.31
9 AT2G32950 Transducin/WD40 repeat-like superfamily protein ARABIDOPSIS THALIANA CONSTITUTIVE
PHOTOMORPHOGENIC 1, CONSTITUTIVE
PHOTOMORPHOGENIC 1, DEETIOLATED
MUTANT 340, EMBRYO DEFECTIVE 168,
FUSCA 1		 -0.59 0.33 -0.35
10 AT3G17090 Protein phosphatase 2C family protein 0.59 0.33 -0.33
11 AT5G06100 myb domain protein 33 ATMYB33, myb domain protein 33 -0.58 0.32 -0.33
12 AT3G29390 RS2-interacting KH protein RS2-interacting KH protein -0.58 0.33 -0.31
13 AT1G12910 Transducin/WD40 repeat-like superfamily protein ANTHOCYANIN11, LIGHT-REGULATED WD
1		 0.58 0.32 -0.3
14 AT3G28430 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 17 plant structures; EXPRESSED
DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function FPL (InterPro:IPR019155); Has
243 Blast hits to 233 proteins in 101 species: Archae - 0;
Bacteria - 0; Metazoa - 110; Fungi - 0; Plants - 53;
Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink).		 -0.58 0.29 -0.31
15 AT3G61010 Ferritin/ribonucleotide reductase-like family protein -0.58 0.29 -0.3
16 AT1G09570 phytochrome A FAR RED ELONGATED HYPOCOTYL 2, FAR
RED ELONGATED 1, ELONGATED
HYPOCOTYL 8, phytochrome A		 0.58 0.35 -0.3
17 AT5G26610 D111/G-patch domain-containing protein -0.57 0.32 -0.31
18 AT3G58760 Integrin-linked protein kinase family -0.57 0.31 -0.32
19 AT1G27040 Major facilitator superfamily protein -0.57 0.3 -0.31
20 AT2G39280 Ypt/Rab-GAP domain of gyp1p superfamily protein -0.56 0.29 -0.3
21 AT1G07380 Neutral/alkaline non-lysosomal ceramidase -0.56 0.31 -0.33
22 AT5G44750 DNA-directed DNA polymerases ARABIDOPSIS THALIANA HOMOLOG OF
REVERSIONLESS 1, REV1		 -0.55 0.34 -0.32
23 AT2G26280 CTC-interacting domain 7 CTC-interacting domain 7 -0.55 0.3 -0.28
24 AT5G24610 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G49550.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.55 0.31 -0.33
25 AT4G38240 alpha-1,3-mannosyl-glycoprotein
beta-1,2-N-acetylglucosaminyltransferase, putative		 COMPLEX GLYCAN LESS, COMPLEX
GLYCAN LESS 1,
N-ACETYLGLUCOSAMINYLTRANSFERASE I		 -0.55 0.31 -0.31
26 AT1G13630 Tetratricopeptide repeat (TPR)-like superfamily protein -0.55 0.31 -0.31
27 AT5G35270 transposable element gene -0.55 0.3 -0.32
28 AT5G22400 Rho GTPase activating protein with PAK-box/P21-Rho-binding
domain		 0.54 0.31 -0.32
29 AT2G22390 pseudogene, putative GTP-binding protein, similar to
GTP-binding protein GI:303738 from (Pisum sativum); blastp
match of 75% identity and 3.6e-56 P-value to
GP|303738|dbj|BAA02110.1||D12542 GTP-binding protein {Pisum
sativum}		 ATRABA4E, RAB GTPase homolog A4E -0.54 0.31 -0.32
30 AT1G70000 myb-like transcription factor family protein -0.54 0.3 -0.32
31 AT5G15581 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: leaf apex; Has
30201 Blast hits to 17322 proteins in 780 species: Archae -
12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants
- 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.54 0.31 -0.33
32 AT1G75590 SAUR-like auxin-responsive protein family 0.54 0.32 -0.33
33 AT2G41810 Protein of unknown function, DUF642 0.53 0.31 -0.32
34 AT5G49070 3-ketoacyl-CoA synthase 21 3-ketoacyl-CoA synthase 21 -0.52 0.31 -0.33
35 AT1G35890 NAC (No Apical Meristem) domain transcriptional regulator
superfamily protein		 -0.52 0.31 -0.33
36 ATMG01130 hypothetical protein ORF106F -0.52 0.31 -0.33
37 AT5G01030 Protein of unknown function (DUF3527) -0.51 0.31 -0.32
38 AT3G28510 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.51 0.3 -0.33
39 AT1G73510 unknown protein; Has 7 Blast hits to 7 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.51 0.31 -0.31
40 AT2G16110 pseudogene, similar to putative AP endonuclease/reverse
transcriptase, blastp match of 34% identity and 5.9e-45
P-value to GP|21952510|gb|AAM82604.1|AF525305_2|AF525305
putative AP endonuclease/reverse transcriptase {Brassica
napus}		 0.51 0.31 -0.31
41 AT2G48150 glutathione peroxidase 4 glutathione peroxidase 4,
glutathione peroxidase 4		 0.51 0.33 -0.32
42 AT5G53670 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: sperm cell; Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.51 0.35 -0.32
43 AT1G30850 root hair specific 4 root hair specific 4 0.51 0.3 -0.3
44 AT2G01770 vacuolar iron transporter 1 ATVIT1, vacuolar iron transporter
1		 -0.51 0.33 -0.31
45 AT3G20650 mRNA capping enzyme family protein -0.51 0.31 -0.31
46 AT1G13190 RNA-binding (RRM/RBD/RNP motifs) family protein 0.51 0.33 -0.3
47 AT2G43220 Cysteine/Histidine-rich C1 domain family protein 0.51 0.29 -0.29
48 AT1G76140 Prolyl oligopeptidase family protein 0.51 0.33 -0.32
49 AT5G02140 Pathogenesis-related thaumatin superfamily protein 0.5 0.32 -0.32
50 AT3G47110 Leucine-rich repeat protein kinase family protein 0.49 0.33 -0.31
51 AT3G09160 RNA-binding (RRM/RBD/RNP motifs) family protein -0.49 0.31 -0.32
52 AT5G29040 pseudogene, hypothetical protein -0.49 0.31 -0.31
53 AT2G20950 Arabidopsis phospholipase-like protein (PEARLI 4) family -0.49 0.31 -0.3
54 AT5G51810 gibberellin 20 oxidase 2 AT2353, ATGA20OX2, gibberellin 20
oxidase 2		 0.48 0.32 -0.32
55 AT2G10660 transposable element gene -0.48 0.32 -0.34
56 AT1G62340 PA-domain containing subtilase family protein ABNORMAL LEAF-SHAPE, ABNORMAL
LEAF-SHAPE 1		 0.48 0.31 -0.31
57 AT4G13120 transposable element gene 0.48 0.3 -0.32
58 AT2G40260 Homeodomain-like superfamily protein -0.48 0.32 -0.31
59 AT4G22100 beta glucosidase 2 beta glucosidase 2 0.48 0.32 -0.3
60 AT3G47010 Glycosyl hydrolase family protein 0.48 0.31 -0.32
61 AT2G36740 sequence-specific DNA binding transcription factors;DNA
binding;DNA binding		 ATSWC2, SWC2 -0.47 0.31 -0.33
62 AT3G24060 Plant self-incompatibility protein S1 family -0.47 0.33 -0.33
63 AT5G60080 Protein kinase superfamily protein -0.47 0.32 -0.33
64 AT1G59725 DNAJ heat shock family protein 0.46 0.32 -0.31
65 AT4G10540 Subtilase family protein 0.46 0.33 -0.3
66 AT1G29870 tRNA synthetase class II (G, H, P and S) family protein 0.46 0.31 -0.3
67 AT5G16420 Pentatricopeptide repeat (PPR-like) superfamily protein 0.46 0.32 -0.29
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
68 C0004 β-Alanine - β-Alanine uracil degradation II (reductive),
pantothenate biosynthesis,
beta-alanine biosynthesis II,
beta-alanine biosynthesis I 		0.52 0.31 -0.33 C0004