AT3G12040 : -
Query Information
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AGICode AT3G12040
Description DNA-3-methyladenine glycosylase (MAG)
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G12040 DNA-3-methyladenine glycosylase (MAG) 1 0.3 -0.32
2 AT4G02480 AAA-type ATPase family protein -0.63 0.32 -0.32
3 AT2G39940 RNI-like superfamily protein CORONATINE INSENSITIVE 1 -0.63 0.32 -0.32
4 AT1G47240 NRAMP metal ion transporter 2 ATNRAMP2, NRAMP metal ion
transporter 2		 -0.62 0.32 -0.32
5 AT1G80570 RNI-like superfamily protein 0.61 0.31 -0.32
6 AT5G39410 Saccharopine dehydrogenase -0.6 0.32 -0.35
7 AT5G19400 Telomerase activating protein Est1 SMG7 -0.58 0.32 -0.28
8 AT3G01310 Phosphoglycerate mutase-like family protein -0.58 0.32 -0.32
9 AT1G73130 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G17780.2); Has 1447 Blast hits
to 774 proteins in 215 species: Archae - 0; Bacteria - 679;
Metazoa - 377; Fungi - 171; Plants - 42; Viruses - 6; Other
Eukaryotes - 172 (source: NCBI BLink).		 -0.58 0.31 -0.32
10 AT3G01540 DEAD box RNA helicase 1 ARABIDOPSIS THALIANA DEAD BOX RNA
HELICASE 1, DEAD box RNA helicase
1		 -0.58 0.31 -0.32
11 AT1G80930 MIF4G domain-containing protein / MA3 domain-containing
protein		 -0.58 0.32 -0.32
12 AT4G17140 pleckstrin homology (PH) domain-containing protein -0.57 0.3 -0.3
13 AT1G26110 decapping 5 decapping 5 -0.57 0.31 -0.32
14 AT5G42950 GYF domain-containing protein -0.57 0.31 -0.32
15 AT5G42920 THO complex, subunit 5 AtTHO5, THO5 -0.56 0.3 -0.31
16 AT1G50500 Membrane trafficking VPS53 family protein ARABIDOPSIS THALIANA VPS53
HOMOLOG, HEAT-INTOLERANT 1, VPS53		 -0.56 0.33 -0.32
17 AT2G38180 SGNH hydrolase-type esterase superfamily protein -0.56 0.31 -0.3
18 AT4G20300 Protein of unknown function (DUF1639) -0.56 0.31 -0.32
19 AT5G42540 exoribonuclease 2 EXORIBONUCLEASE 2, exoribonuclease
2		 -0.56 0.33 -0.33
20 AT4G33730 CAP (Cysteine-rich secretory proteins, Antigen 5, and
Pathogenesis-related 1 protein) superfamily protein		 0.55 0.3 -0.31
21 AT4G05630 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G12617.1); Has 22 Blast hits
to 22 proteins in 3 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.55 0.32 -0.33
22 AT5G61960 MEI2-like protein 1 MEI2-like protein 1, MEI2-like
protein 1		 -0.55 0.32 -0.3
23 AT5G42990 ubiquitin-conjugating enzyme 18 ubiquitin-conjugating enzyme 18 -0.54 0.3 -0.33
24 AT5G06460 ubiquitin activating enzyme 2 ARABIDOPSIS THALIANA UBIQUITIN
ACTIVATING ENZYME 2, ubiquitin
activating enzyme 2		 -0.54 0.32 -0.34
25 AT1G34550 Protein of unknown function (DUF616) EMBRYO DEFECTIVE 2756 -0.54 0.32 -0.32
26 AT2G40400 Protein of unknown function (DUF399 and DUF3411) -0.53 0.32 -0.31
27 AT1G44030 Cysteine/Histidine-rich C1 domain family protein 0.53 0.31 -0.31
28 AT2G28390 SAND family protein -0.53 0.31 -0.31
29 AT5G64270 splicing factor, putative -0.53 0.32 -0.3
30 AT3G13670 Protein kinase family protein -0.53 0.31 -0.32
31 AT3G58580 DNAse I-like superfamily protein -0.52 0.33 -0.32
32 AT5G17030 UDP-glucosyl transferase 78D3 UDP-glucosyl transferase 78D3 -0.52 0.31 -0.31
33 AT1G48410 Stabilizer of iron transporter SufD / Polynucleotidyl
transferase		 ARGONAUTE 1 -0.52 0.32 -0.32
34 AT5G26830 Threonyl-tRNA synthetase -0.52 0.32 -0.29
35 AT5G46550 DNA-binding bromodomain-containing protein -0.52 0.33 -0.34
36 AT3G56860 UBP1-associated protein 2A UBP1-associated protein 2A -0.52 0.3 -0.32
37 AT1G03560 Pentatricopeptide repeat (PPR-like) superfamily protein -0.51 0.33 -0.33
38 AT5G23610 BEST Arabidopsis thaliana protein match is: SWITCH1
(TAIR:AT5G51330.1); Has 170 Blast hits to 162 proteins in
36 species: Archae - 3; Bacteria - 6; Metazoa - 6; Fungi -
4; Plants - 117; Viruses - 0; Other Eukaryotes - 34
(source: NCBI BLink).		 -0.51 0.29 -0.33
39 AT3G14800 transposable element gene -0.5 0.33 -0.31
40 AT2G27100 C2H2 zinc-finger protein SERRATE (SE) SERRATE -0.5 0.31 -0.29
41 AT4G00630 K+ efflux antiporter 2 ATKEA2, K+ efflux antiporter 2 -0.5 0.35 -0.32
42 AT3G11020 DRE/CRT-binding protein 2B DEHYDRATION-RESPONSIVE ELEMENT
BINDING PROTEIN 2, DRE/CRT-binding
protein 2B		 -0.5 0.32 -0.34
43 AT3G49230 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.5 0.31 -0.29
44 AT5G08450 CONTAINS InterPro DOMAIN/s: Histone deacetylation protein
Rxt3 (InterPro:IPR013951); Has 34444 Blast hits to 20801
proteins in 1175 species: Archae - 64; Bacteria - 2390;
Metazoa - 15568; Fungi - 3729; Plants - 1886; Viruses -
208; Other Eukaryotes - 10599 (source: NCBI BLink).		 -0.49 0.3 -0.31
45 AT3G63020 Protein of unknown function (DUF3049) -0.49 0.35 -0.32
46 AT4G03550 glucan synthase-like 5 glucan synthase-like 5, ATGSL5,
GSL05, glucan synthase-like 5,
GLUCAN SYNTHASE-LIKE 5, POWDERY
MILDEW RESISTANT 4		 -0.49 0.32 -0.33
47 AT5G51300 splicing factor-related -0.49 0.33 -0.33
48 AT5G51230 VEFS-Box of polycomb protein AtEMF2, CYR1, EMBRYONIC FLOWER 2,
CYTOKININ RESISTANT 1		 -0.49 0.31 -0.32
49 AT2G44000 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 0.48 0.34 -0.3
50 AT5G57260 cytochrome P450, family 71, subfamily B, polypeptide 10 cytochrome P450, family 71,
subfamily B, polypeptide 10		 0.48 0.3 -0.32
51 AT5G52350 exocyst subunit exo70 family protein A3 exocyst subunit exo70 family
protein A3, exocyst subunit exo70
family protein A3		 0.47 0.31 -0.3
52 AT3G57620 glyoxal oxidase-related protein 0.46 0.29 -0.33
53 AT5G39400 Calcium/lipid-binding (CaLB) phosphatase ATPTEN1, Phosphatase and TENsin
homolog deleted on chromosome ten
1		 0.46 0.29 -0.31
54 AT3G30530 basic leucine-zipper 42 basic leucine-zipper 42, basic
leucine-zipper 42		 0.45 0.32 -0.33
55 AT1G16760 Protein kinase protein with adenine nucleotide alpha
hydrolases-like domain		 0.45 0.33 -0.31
56 AT2G06140 transposable element gene 0.44 0.32 -0.33
57 AT4G10540 Subtilase family protein 0.43 0.32 -0.33
58 AT4G10410 Leucine-rich repeat (LRR) family protein 0.42 0.32 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
59 C0016 S-Adenosylmethionine S-Adenosyl-L-methionine S-Adenosyl-L-methionine ethylene biosynthesis I (plants),
scopoletin biosynthesis,
quercetinsulphates biosynthesis,
siroheme biosynthesis,
gibberellin inactivation II (methylation),
suberin biosynthesis,
volatile benzenoid biosynthesis I (ester formation),
S-adenosyl-L-methionine cycle II,
methylhalides biosynthesis (plants),
S-methylmethionine cycle,
ubiquinol-9 biosynthesis (eukaryotic),
nicotianamine biosynthesis,
methionine biosynthesis II,
spermine biosynthesis,
choline biosynthesis II,
diphthamide biosynthesis,
homogalacturonan biosynthesis,
phosphatidylcholine biosynthesis II,
methylquercetin biosynthesis,
plastoquinol biosynthesis,
chlorophyllide a biosynthesis I,
ferulate and sinapate biosynthesis,
ubiquinol-10 biosynthesis (eukaryotic),
phenylpropanoid biosynthesis,
free phenylpropanoid acid biosynthesis,
seleno-amino acid detoxification and volatilization I,
plant sterol biosynthesis,
lipoate biosynthesis and incorporation I,
methyl indole-3-acetate interconversion,
cyclopropane and cyclopropene fatty acid biosynthesis,
spermidine biosynthesis I,
thiamine biosynthesis II,
methionine salvage pathway,
spermidine hydroxycinnamic acid conjugates biosynthesis,
simple coumarins biosynthesis,
phosphatidylcholine biosynthesis IV,
glutathione-mediated detoxification II,
S-adenosyl-L-methionine biosynthesis,
methionine degradation I (to homocysteine),
phosphatidylcholine biosynthesis III,
phylloquinol biosynthesis,
choline biosynthesis I,
biotin biosynthesis II,
vitamin E biosynthesis 		0.66 0.48 -0.5 C0016