AT3G32060 : -
Query Information
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AGICode AT3G32060
Description transposable element gene
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G32060 transposable element gene 1 0.33 -0.3
2 AT2G17975 zinc finger (Ran-binding) family protein -0.77 0.34 -0.31
3 AT4G25260 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 0.71 0.32 -0.3
4 AT4G36980 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Splicing factor, suppressor of white
apricot (InterPro:IPR019147); Has 7672 Blast hits to 5479
proteins in 321 species: Archae - 0; Bacteria - 89; Metazoa
- 5155; Fungi - 712; Plants - 341; Viruses - 39; Other
Eukaryotes - 1336 (source: NCBI BLink).		 -0.7 0.29 -0.32
5 AT1G02360 Chitinase family protein 0.7 0.31 -0.34
6 AT3G26350 LOCATED IN: chloroplast; EXPRESSED IN: root, pedicel,
carpel, stamen; EXPRESSED DURING: 4 anthesis, petal
differentiation and expansion stage; CONTAINS InterPro
DOMAIN/s: Late embryogenesis abundant protein, group 2
(InterPro:IPR004864); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G13050.1); Has 3534
Blast hits to 2704 proteins in 342 species: Archae - 6;
Bacteria - 192; Metazoa - 1076; Fungi - 505; Plants - 1162;
Viruses - 224; Other Eukaryotes - 369 (source: NCBI BLink).		 -0.68 0.33 -0.31
7 AT3G48750 cell division control 2 cell division control 2, CDC2A,
CDC2AAT, CDK2, CDKA1, CDKA;1		 0.67 0.31 -0.3
8 AT4G16430 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.67 0.31 -0.34
9 AT2G14380 transposable element gene 0.66 0.33 -0.32
10 AT5G55390 ENHANCED DOWNY MILDEW 2 ENHANCED DOWNY MILDEW 2 -0.66 0.32 -0.32
11 AT3G58450 Adenine nucleotide alpha hydrolases-like superfamily
protein		 -0.66 0.3 -0.32
12 AT2G28070 ABC-2 type transporter family protein ATP-binding cassette G3 -0.66 0.31 -0.32
13 AT3G28430 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 17 plant structures; EXPRESSED
DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function FPL (InterPro:IPR019155); Has
243 Blast hits to 233 proteins in 101 species: Archae - 0;
Bacteria - 0; Metazoa - 110; Fungi - 0; Plants - 53;
Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink).		 -0.66 0.3 -0.32
14 AT1G62914 pentatricopeptide (PPR) repeat-containing protein -0.66 0.31 -0.32
15 AT2G46930 Pectinacetylesterase family protein 0.65 0.33 -0.34
16 AT5G55300 DNA topoisomerase I alpha MGOUN 1, TOPOISOMERASE 1, DNA
topoisomerase I alpha		 -0.65 0.33 -0.34
17 AT1G09230 RNA-binding (RRM/RBD/RNP motifs) family protein -0.65 0.32 -0.35
18 AT3G46500 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.65 0.31 -0.32
19 AT4G19440 Tetratricopeptide repeat (TPR)-like superfamily protein -0.65 0.31 -0.3
20 AT2G39580 CONTAINS InterPro DOMAIN/s: Putative zinc-finger domain
(InterPro:IPR019607); Has 249 Blast hits to 219 proteins in
85 species: Archae - 0; Bacteria - 144; Metazoa - 29; Fungi
- 8; Plants - 50; Viruses - 0; Other Eukaryotes - 18
(source: NCBI BLink).		 -0.65 0.33 -0.3
21 AT5G08210 MIR834a; miRNA microRNA834A -0.65 0.3 -0.3
22 AT5G21110 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.65 0.33 -0.31
23 AT3G04280 response regulator 22 response regulator 22, response
regulator 22		 0.64 0.33 -0.3
24 AT2G15860 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 13 growth stages; Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.64 0.33 -0.3
25 AT5G65820 Pentatricopeptide repeat (PPR) superfamily protein -0.64 0.31 -0.32
26 AT2G41350 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G21980.1); Has 188 Blast hits
to 188 proteins in 66 species: Archae - 0; Bacteria - 12;
Metazoa - 90; Fungi - 15; Plants - 54; Viruses - 0; Other
Eukaryotes - 17 (source: NCBI BLink).		 AtAUG1, augmin 1, EMBRYO DEFECTIVE
2819		 0.64 0.32 -0.34
27 AT1G28160 Integrase-type DNA-binding superfamily protein 0.64 0.32 -0.32
28 AT5G20680 TRICHOME BIREFRINGENCE-LIKE 16 TRICHOME BIREFRINGENCE-LIKE 16 0.64 0.33 -0.32
29 AT5G54140 IAA-leucine-resistant (ILR1)-like 3 IAA-leucine-resistant (ILR1)-like
3		 0.64 0.31 -0.31
30 AT1G43260 hAT transposon superfamily protein -0.64 0.31 -0.3
31 ATMG00400 hypothetical protein ORF157 -0.63 0.33 -0.33
32 AT3G08910 DNAJ heat shock family protein 0.63 0.33 -0.29
33 AT2G31110 Plant protein of unknown function (DUF828) TRICHOME BIREFRINGENCE-LIKE 40 0.63 0.31 -0.35
34 ATMG00060 NADH dehydrogenase subunit 5C NADH DEHYDROGENASE SUBUNIT 5, NADH
DEHYDROGENASE SUBUNIT 5.3, NADH
dehydrogenase subunit 5C		 -0.63 0.32 -0.33
35 AT2G32630 Pentatricopeptide repeat (PPR-like) superfamily protein -0.63 0.3 -0.32
36 AT5G05310 TLC ATP/ADP transporter -0.63 0.33 -0.33
37 AT2G46560 transducin family protein / WD-40 repeat family protein -0.63 0.33 -0.31
38 AT5G48140 Pectin lyase-like superfamily protein 0.63 0.32 -0.32
39 AT3G59100 glucan synthase-like 11 glucan synthase-like 11, gsl11,
glucan synthase-like 11		 -0.63 0.31 -0.3
40 AT3G43760 transposable element gene -0.63 0.32 -0.3
41 AT1G22860 Vacuolar sorting protein 39 -0.62 0.33 -0.31
42 AT4G04150 transposable element gene -0.62 0.3 -0.31
43 AT3G45420 Concanavalin A-like lectin protein kinase family protein -0.62 0.31 -0.32
44 AT1G19485 Transducin/WD40 repeat-like superfamily protein -0.62 0.31 -0.31
45 AT5G59800 methyl-CPG-binding domain 7 ARABIDOPSIS THALIANA
METHYL-CPG-BINDING DOMAIN 7,
methyl-CPG-binding domain 7		 -0.61 0.33 -0.31
46 AT2G21490 dehydrin LEA dehydrin LEA -0.61 0.32 -0.32
47 AT2G26940 C2H2-type zinc finger family protein 0.61 0.31 -0.32
48 AT2G41520 Heat shock protein DnaJ with tetratricopeptide repeat tetratricopeptide repeat 15 -0.61 0.29 -0.31
49 AT2G27980 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc
finger domain		 -0.61 0.31 -0.33
50 AT5G24580 Heavy metal transport/detoxification superfamily protein 0.61 0.31 -0.32
51 AT1G35970 transposable element gene -0.6 0.31 -0.31
52 AT3G29390 RS2-interacting KH protein RS2-interacting KH protein -0.6 0.34 -0.33
53 AT1G69430 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G26650.1); Has 216 Blast hits
to 215 proteins in 17 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 216; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.6 0.33 -0.33
54 AT5G19660 SITE-1 protease SITE-1 PROTEASE, ATSBT6.1, SITE-1
protease		 -0.59 0.32 -0.31
55 AT2G17845 NAD(P)-binding Rossmann-fold superfamily protein -0.59 0.34 -0.33
56 AT1G23830 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 12 plant structures;
EXPRESSED DURING: 9 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G23840.1); Has 57 Blast hits to 52 proteins in 7
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 57; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.59 0.33 -0.33
57 AT4G33870 Peroxidase superfamily protein -0.59 0.31 -0.32
58 AT1G42250 transposable element gene -0.59 0.32 -0.33
59 AT4G17140 pleckstrin homology (PH) domain-containing protein -0.58 0.29 -0.32
60 AT3G27670 ARM repeat superfamily protein RESURRECTION1 -0.58 0.32 -0.32
61 AT3G15490 Regulator of Vps4 activity in the MVB pathway protein -0.58 0.33 -0.32
62 AT1G42630 transposable element gene 0.58 0.31 -0.31
63 AT1G31600 RNA-binding (RRM/RBD/RNP motifs) family protein Arabidopsis thaliana tRNA
methyltransferase 9, tRNA
methyltransferase 9		 -0.58 0.3 -0.3
64 AT1G75360 unknown protein; Has 74 Blast hits to 71 proteins in 15
species: Archae - 0; Bacteria - 4; Metazoa - 4; Fungi - 0;
Plants - 54; Viruses - 0; Other Eukaryotes - 12 (source:
NCBI BLink).		 -0.58 0.31 -0.31
65 AT4G02660 Beige/BEACH domain ;WD domain, G-beta repeat protein -0.58 0.31 -0.32
66 AT5G22720 F-box/RNI-like superfamily protein -0.58 0.32 -0.32
67 AT2G46690 SAUR-like auxin-responsive protein family -0.58 0.31 -0.31
68 AT5G06520 SWAP (Suppressor-of-White-APricot)/surp domain-containing
protein		 0.58 0.31 -0.32
69 AT1G58170 Disease resistance-responsive (dirigent-like protein)
family protein		 0.58 0.31 -0.29
70 AT1G10720 BSD domain-containing protein 0.58 0.31 -0.32
71 AT3G07990 serine carboxypeptidase-like 27 serine carboxypeptidase-like 27 0.58 0.3 -0.31
72 AT1G02100 Leucine carboxyl methyltransferase SUPPRESSOR OF BRI1 -0.57 0.32 -0.3
73 AT1G62890 transposable element gene -0.57 0.31 -0.34
74 AT3G58080 unknown protein; Has 3 Blast hits to 3 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.57 0.31 -0.34
75 AT3G50140 Plant protein of unknown function (DUF247) 0.57 0.33 -0.31
76 AT1G52570 phospholipase D alpha 2 phospholipase D alpha 2 -0.57 0.32 -0.33
77 AT4G33210 F-box family protein SLOW MOTION -0.57 0.31 -0.32
78 AT1G05770 Mannose-binding lectin superfamily protein 0.57 0.31 -0.32
79 AT2G27900 CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF2451, C-terminal (InterPro:IPR019514), Vacuolar protein
sorting-associated protein 54 (InterPro:IPR019515); Has 316
Blast hits to 252 proteins in 92 species: Archae - 0;
Bacteria - 2; Metazoa - 200; Fungi - 2; Plants - 68;
Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).		 -0.57 0.31 -0.31
80 AT3G20580 COBRA-like protein 10 precursor COBRA-like protein 10 precursor 0.57 0.33 -0.3
81 AT3G46220 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF2042 (InterPro:IPR018611); Has 559
Blast hits to 533 proteins in 154 species: Archae - 3;
Bacteria - 32; Metazoa - 305; Fungi - 42; Plants - 50;
Viruses - 3; Other Eukaryotes - 124 (source: NCBI BLink).		 -0.57 0.31 -0.32
82 AT5G09410 ethylene induced calmodulin binding protein calmodulin-binding transcription
activator 1, ethylene induced
calmodulin binding protein		 -0.57 0.32 -0.32
83 AT4G30410 sequence-specific DNA binding transcription factors 0.56 0.33 -0.3
84 AT3G48090 alpha/beta-Hydrolases superfamily protein ATEDS1, enhanced disease
susceptibility 1		 0.56 0.31 -0.31
85 AT5G35930 AMP-dependent synthetase and ligase family protein -0.56 0.29 -0.29
86 AT4G07370 transposable element gene -0.56 0.32 -0.33
87 AT4G13960 F-box/RNI-like superfamily protein 0.56 0.31 -0.29
88 AT5G25270 Ubiquitin-like superfamily protein -0.56 0.32 -0.31
89 AT1G67230 little nuclei1 CROWDED NUCLEI 1, LITTLE NUCLEI1 -0.56 0.33 -0.34
90 AT1G35183 unknown protein; Has 5 Blast hits to 5 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.56 0.31 -0.31
91 AT4G14590 embryo defective 2739 embryo defective 2739 0.56 0.31 -0.33
92 AT4G39560 Galactose oxidase/kelch repeat superfamily protein -0.56 0.31 -0.32
93 AT1G54240 winged-helix DNA-binding transcription factor family
protein		 0.56 0.31 -0.32
94 AT5G15070 Phosphoglycerate mutase-like family protein -0.56 0.3 -0.3
95 AT1G13910 Leucine-rich repeat (LRR) family protein -0.56 0.32 -0.31
96 AT1G60270 beta glucosidase 6 beta glucosidase 6 -0.56 0.32 -0.31
97 ATCG00740 RNA polymerase subunit alpha RNA polymerase subunit alpha -0.55 0.31 -0.3
98 AT2G20460 transposable element gene -0.55 0.29 -0.31
99 AT1G10570 Cysteine proteinases superfamily protein OVERLY TOLERANT TO SALT 2, UB-LIKE
PROTEASE 1C		 -0.55 0.31 -0.28
100 AT1G68760 nudix hydrolase 1 ARABIDOPSIS THALIANA NUDIX
HYDROLASE HOMOLOG 1, nudix
hydrolase 1, nudix hydrolase 1,
NUDIX HYDROLASE 1		 -0.55 0.29 -0.32
101 AT4G30570 Glucose-1-phosphate adenylyltransferase family protein -0.55 0.3 -0.31