AT3G13720 : PRENYLATED RAB ACCEPTOR 1.F3
Query Information
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AGICode AT3G13720
Description PRA1 (Prenylated rab acceptor) family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G13720 PRA1 (Prenylated rab acceptor) family protein PRENYLATED RAB ACCEPTOR 1.F3, PRA8 1 0.31 -0.31
2 AT5G65520 Tetratricopeptide repeat (TPR)-like superfamily protein 0.79 0.29 -0.3
3 AT5G02280 SNARE-like superfamily protein 0.73 0.32 -0.33
4 AT1G47310 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 13 growth stages; Has 45 Blast hits to 45
proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.72 0.32 -0.33
5 AT5G59910 Histone superfamily protein HTB4 0.72 0.3 -0.3
6 AT3G66656 AGAMOUS-like 91 AGAMOUS-like 91 0.71 0.31 -0.32
7 AT5G58970 uncoupling protein 2 uncoupling protein 2, uncoupling
protein 2		 0.71 0.35 -0.33
8 AT3G62230 F-box family protein DUO1-activated F-box 1 0.7 0.31 -0.32
9 AT3G51520 diacylglycerol acyltransferase family 0.7 0.3 -0.33
10 AT3G04810 NIMA-related kinase 2 NIMA-related kinase 2,
NIMA-related kinase 2		 -0.7 0.32 -0.34
11 AT1G32410 Vacuolar protein sorting 55 (VPS55) family protein 0.69 0.34 -0.33
12 AT2G47150 NAD(P)-binding Rossmann-fold superfamily protein -0.69 0.3 -0.31
13 AT5G59050 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G54000.1); Has 35333 Blast
hits to 34131 proteins in 2444 species: Archae - 798;
Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531;
Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).		 0.69 0.3 -0.31
14 AT5G18180 H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein -0.69 0.31 -0.32
15 AT1G58070 unknown protein; Has 286 Blast hits to 266 proteins in 81
species: Archae - 2; Bacteria - 25; Metazoa - 90; Fungi -
19; Plants - 78; Viruses - 4; Other Eukaryotes - 68
(source: NCBI BLink).		 0.69 0.31 -0.32
16 AT2G05200 transposable element gene -0.69 0.34 -0.34
17 AT1G66960 Terpenoid cyclases family protein LUP5 -0.69 0.32 -0.32
18 ATMG00070 NADH dehydrogenase subunit 9 NADH dehydrogenase subunit 9 -0.69 0.32 -0.31
19 AT2G16210 Transcriptional factor B3 family protein -0.69 0.33 -0.32
20 AT5G62430 cycling DOF factor 1 cycling DOF factor 1 0.68 0.33 -0.32
21 AT3G08630 Protein of unknown function (DUF3411) 0.68 0.29 -0.3
22 AT3G22170 far-red elongated hypocotyls 3 far-red elongated hypocotyls 3 -0.68 0.31 -0.3
23 AT1G59535 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.67 0.34 -0.31
24 AT5G17690 like heterochromatin protein (LHP1) AtLHP1, LIKE HETEROCHROMATIN
PROTEIN 1, TERMINAL FLOWER 2		 -0.67 0.31 -0.33
25 AT3G08880 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G01570.1); Has 177 Blast hits
to 175 proteins in 60 species: Archae - 4; Bacteria - 33;
Metazoa - 18; Fungi - 11; Plants - 59; Viruses - 0; Other
Eukaryotes - 52 (source: NCBI BLink).		 0.67 0.3 -0.33
26 AT5G59290 UDP-glucuronic acid decarboxylase 3 ATUXS3, UDP-glucuronic acid
decarboxylase 3		 0.67 0.29 -0.29
27 AT1G79780 Uncharacterised protein family (UPF0497) -0.67 0.31 -0.3
28 AT1G26760 SET domain protein 35 ATXR1, SET domain protein 35 -0.67 0.33 -0.32
29 AT2G42060 Cysteine/Histidine-rich C1 domain family protein -0.67 0.33 -0.31
30 AT1G59950 NAD(P)-linked oxidoreductase superfamily protein -0.67 0.29 -0.33
31 AT1G79030 Chaperone DnaJ-domain superfamily protein -0.66 0.32 -0.33
32 AT3G07440 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G48530.1); Has 37 Blast hits
to 37 proteins in 13 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other
Eukaryotes - 2 (source: NCBI BLink).		 0.66 0.31 -0.31
33 AT5G58850 myb domain protein 119 MYB DOMAIN PROTEIN 119, myb domain
protein 119		 0.66 0.33 -0.32
34 AT3G22070 proline-rich family protein 0.66 0.33 -0.33
35 AT4G34850 Chalcone and stilbene synthase family protein LESS ADHESIVE POLLEN 5 -0.66 0.33 -0.31
36 AT5G25290 F-box family protein with a domain of unknown function
(DUF295)		 -0.66 0.32 -0.3
37 AT5G15020 SIN3-like 2 SIN3-like 2 -0.66 0.3 -0.32
38 AT5G56130 Transducin/WD40 repeat-like superfamily protein AtTEX1, TEX1, THO3 0.65 0.31 -0.29
39 AT2G30930 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, plasma membrane, membrane; EXPRESSED IN: 24
plant structures; EXPRESSED DURING: 14 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G06540.1); Has 194 Blast hits to 176 proteins in
78 species: Archae - 0; Bacteria - 101; Metazoa - 15; Fungi
- 25; Plants - 12; Viruses - 4; Other Eukaryotes - 37
(source: NCBI BLink).		 0.65 0.31 -0.31
40 AT5G63980 Inositol monophosphatase family protein ALTERED EXPRESSION OF APX2 8,
ATSAL1, FIERY1, HIGH EXPRESSION OF
OSMOTICALLY RESPONSIVE GENES 2,
ROTUNDA 1, SAL1, suppressors of
PIN1 overexpression 1		 0.65 0.33 -0.33
41 AT4G25570 Cytochrome b561/ferric reductase transmembrane protein
family		 ACYB-2 0.65 0.31 -0.32
42 ATMG00400 hypothetical protein ORF157 -0.65 0.31 -0.31
43 AT5G39860 basic helix-loop-helix (bHLH) DNA-binding family protein BASIC HELIX-LOOP-HELIX PROTEIN
136, BANQUO 1, PACLOBUTRAZOL
RESISTANCE1		 0.65 0.32 -0.31
44 AT5G58040 homolog of yeast FIP1 [V] homolog of yeast FIP1 [V],
ATFIPS5, homolog of yeast FIP1
[V], FIPS5		 -0.65 0.34 -0.32
45 AT3G05210 nucleotide repair protein, putative ERCC1, UV REPAIR DEFICIENT 7 -0.65 0.33 -0.33
46 AT1G74490 Protein kinase superfamily protein -0.65 0.32 -0.32
47 AT2G21000 transposable element gene 0.65 0.33 -0.32
48 AT3G09740 syntaxin of plants 71 ATSYP71, syntaxin of plants 71 0.65 0.32 -0.31
49 AT5G47520 RAB GTPase homolog A5A RAB GTPase homolog A5A, RAB GTPase
homolog A5A		 0.65 0.33 -0.33
50 AT1G20330 sterol methyltransferase 2 COTYLEDON VASCULAR PATTERN 1,
FRILL1, sterol methyltransferase 2		 0.64 0.31 -0.31
51 AT5G22400 Rho GTPase activating protein with PAK-box/P21-Rho-binding
domain		 0.64 0.32 -0.31
52 AT2G19700 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; Has 5 Blast hits to 5 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.64 0.33 -0.32
53 AT1G26260 cryptochrome-interacting basic-helix-loop-helix 5 cryptochrome-interacting
basic-helix-loop-helix 5		 -0.64 0.3 -0.3
54 AT4G23950 Galactose-binding protein -0.64 0.3 -0.33
55 AT1G76200 unknown protein; Has 96 Blast hits to 96 proteins in 48
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 47;
Plants - 38; Viruses - 0; Other Eukaryotes - 11 (source:
NCBI BLink).		 0.64 0.33 -0.32
56 AT4G21590 endonuclease 3 endonuclease 3 -0.63 0.3 -0.33
57 AT3G42850 Mevalonate/galactokinase family protein -0.63 0.32 -0.32
58 AT1G22960 Pentatricopeptide repeat (PPR) superfamily protein -0.63 0.33 -0.31
59 AT3G12170 Chaperone DnaJ-domain superfamily protein 0.63 0.31 -0.33
60 AT4G14550 indole-3-acetic acid inducible 14 indole-3-acetic acid inducible 14,
SOLITARY ROOT		 0.63 0.3 -0.32
61 AT1G19290 Pentatricopeptide repeat (PPR) superfamily protein -0.63 0.31 -0.32
62 AT1G50530 BEST Arabidopsis thaliana protein match is:
Calcium-dependent lipid-binding (CaLB domain) family
protein (TAIR:AT1G50570.2); Has 10 Blast hits to 10
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 10; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.63 0.31 -0.32
63 AT2G25760 Protein kinase family protein -0.63 0.3 -0.32
64 AT1G27600 Nucleotide-diphospho-sugar transferases superfamily protein IRREGULAR XYLEM 9 Homolog,
IRREGULAR XYLEM 9-LIKE		 0.63 0.28 -0.32
65 AT4G05500 pseudogene, F-box protein family, AtFBL9/AtFBL23, contains
similarity to N7 protein GI:3273101 from (Medicago
truncatula); blastp match of 39% identity and 1.6e-34
P-value to GP|3273101|emb|CAA76808.1||Y17613 N7 protein
{Medicago truncatula}		 -0.63 0.3 -0.31
66 AT1G12180 BEST Arabidopsis thaliana protein match is: HSP20-like
chaperones superfamily protein (TAIR:AT5G47600.1); Has 8
Blast hits to 8 proteins in 3 species: Archae - 0; Bacteria
- 0; Metazoa - 0; Fungi - 0; Plants - 8; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.63 0.29 -0.33
67 AT1G54110 Membrane fusion protein Use1 0.63 0.31 -0.28
68 AT4G16430 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.63 0.3 -0.31
69 AT1G06040 B-box zinc finger family protein B-box domain protein 24, SALT
TOLERANCE		 0.63 0.32 -0.34
70 AT1G80970 XH domain-containing protein 0.63 0.31 -0.31
71 AT4G31000 Calmodulin-binding protein -0.63 0.32 -0.34
72 AT2G45960 plasma membrane intrinsic protein 1B ATHH2, NAMED PLASMA MEMBRANE
INTRINSIC PROTEIN 1;2, plasma
membrane intrinsic protein 1B,
TRANSMEMBRANE PROTEIN A		 0.62 0.29 -0.32
73 AT5G64180 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.62 0.3 -0.32
74 AT5G61140 U5 small nuclear ribonucleoprotein helicase -0.62 0.29 -0.34
75 AT4G00355 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G45980.1); Has 100 Blast hits
to 97 proteins in 16 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 100; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 ATG8-interacting protein 2 0.62 0.33 -0.31
76 AT3G57680 Peptidase S41 family protein 0.62 0.32 -0.31
77 AT3G43500 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G42080.1); Has 8 Blast hits to
8 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 8; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.62 0.29 -0.32
78 AT2G47660 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.62 0.29 -0.32
79 AT3G09530 exocyst subunit exo70 family protein H3 exocyst subunit exo70 family
protein H3, exocyst subunit exo70
family protein H3		 -0.62 0.32 -0.32
80 AT1G31814 FRIGIDA like 2 FRIGIDA like 2 -0.62 0.3 -0.3
81 AT3G21550 DUF679 domain membrane protein 2 Arabidopsis thaliana DUF679 domain
membrane protein 2, DUF679 domain
membrane protein 2		 0.62 0.33 -0.32
82 AT2G30860 glutathione S-transferase PHI 9 ATGSTF7, glutathione S-transferase
PHI 9, GLUTTR, glutathione
S-transferase PHI 9		 0.61 0.33 -0.31
83 AT4G12110 sterol-4alpha-methyl oxidase 1-1 ATSMO1-1, sterol-4alpha-methyl
oxidase 1-1		 0.61 0.32 -0.33
84 AT2G17110 Protein of unknown function (DUF630 and DUF632) -0.61 0.32 -0.31
85 AT4G18920 Protein of unknown function (DUF1264) 0.61 0.31 -0.33
86 AT5G48120 ARM repeat superfamily protein -0.61 0.31 -0.32
87 AT4G27680 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.61 0.31 -0.31
88 AT4G09100 RING/U-box superfamily protein -0.61 0.35 -0.33
89 AT5G53800 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.61 0.33 -0.3
90 AT4G13330 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.61 0.32 -0.32
91 AT1G69010 BES1-interacting Myc-like protein 2 BES1-interacting Myc-like protein
2		 0.61 0.33 -0.31
92 AT1G55410 pseudogene, CHP-rich zinc finger protein, putative, similar
to putative CHP-rich zinc finger protein GB:CAB77744
GI:7268217 from (Arabidopsis thaliana)		 -0.61 0.3 -0.31
93 AT4G00420 Double-stranded RNA-binding domain (DsRBD)-containing
protein		 0.61 0.33 -0.31
94 AT2G44770 ELMO/CED-12 family protein 0.61 0.3 -0.33
95 AT5G10810 enhancer of rudimentary protein, putative ARABIDOPSIS THALIANA ENHANCER OF
RUDIMENTARY HOMOLOGUE, ENHANCER OF
RUDIMENTARY HOMOLOGUE		 0.61 0.3 -0.31
96 AT5G04460 RING/U-box superfamily protein -0.61 0.31 -0.3
97 AT2G14800 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G44713.1); Has 41 Blast hits
to 38 proteins in 14 species: Archae - 0; Bacteria - 0;
Metazoa - 7; Fungi - 2; Plants - 16; Viruses - 0; Other
Eukaryotes - 16 (source: NCBI BLink).		 -0.61 0.34 -0.31
98 AT5G65560 Pentatricopeptide repeat (PPR) superfamily protein -0.6 0.34 -0.29
99 AT5G15700 DNA/RNA polymerases superfamily protein -0.6 0.3 -0.31
100 AT2G03260 EXS (ERD1/XPR1/SYG1) family protein -0.6 0.32 -0.3
101 AT4G33130 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED
DURING: 6 growth stages; BEST Arabidopsis thaliana protein
match is: Protein of unknown function, DUF547
(TAIR:AT1G16750.1); Has 192 Blast hits to 192 proteins in
18 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi -
0; Plants - 189; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 -0.6 0.29 -0.32
102 AT1G43790 tracheary element differentiation-related 6 tracheary element
differentiation-related 6		 0.6 0.32 -0.3
103 AT5G64360 Chaperone DnaJ-domain superfamily protein EMF1-Interacting Protein 1 -0.6 0.3 -0.31
104 AT1G44910 pre-mRNA-processing protein 40A pre-mRNA-processing protein 40A,
pre-mRNA-processing protein 40A		 -0.6 0.33 -0.32
105 AT1G61410 DNA double-strand break repair and VJ recombination XRCC4 0.6 0.3 -0.31
106 AT5G13380 Auxin-responsive GH3 family protein -0.6 0.32 -0.31
107 AT4G14460 transposable element gene -0.6 0.32 -0.33
108 AT4G10260 pfkB-like carbohydrate kinase family protein -0.6 0.31 -0.32
109 AT3G46070 C2H2-type zinc finger family protein -0.6 0.31 -0.31
110 AT3G11040 Glycosyl hydrolase family 85 AtENGase85B,
Endo-beta-N-acetyglucosaminidase
85B		 -0.6 0.31 -0.3
111 AT5G61150 leo1-like family protein VERNALIZATION INDEPENDENCE 4 -0.6 0.33 -0.35
112 AT4G19440 Tetratricopeptide repeat (TPR)-like superfamily protein -0.6 0.33 -0.32
113 AT4G33900 Galactose oxidase/kelch repeat superfamily protein 0.6 0.35 -0.31
114 AT5G41320 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.6 0.31 -0.34
115 AT5G27660 Trypsin family protein with PDZ domain -0.6 0.32 -0.33
116 AT1G69160 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G13980.1); Has 173 Blast hits
to 172 proteins in 54 species: Archae - 0; Bacteria - 0;
Metazoa - 25; Fungi - 33; Plants - 84; Viruses - 2; Other
Eukaryotes - 29 (source: NCBI BLink).		 0.6 0.31 -0.32
117 AT3G07660 Kinase-related protein of unknown function (DUF1296) -0.6 0.32 -0.33
118 AT1G51880 root hair specific 6 root hair specific 6 0.6 0.34 -0.31
119 AT3G50370 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 26 plant
structures; EXPRESSED DURING: 15 growth stages; Has 27734
Blast hits to 16708 proteins in 1259 species: Archae - 81;
Bacteria - 3434; Metazoa - 10876; Fungi - 2514; Plants -
987; Viruses - 212; Other Eukaryotes - 9630 (source: NCBI
BLink).		 -0.59 0.32 -0.29
120 AT5G27050 AGAMOUS-like 101 AGAMOUS-like 101 -0.59 0.32 -0.33
121 AT5G07000 sulfotransferase 2B ARABIDOPSIS THALIANA
SULFOTRANSFERASE 2B,
sulfotransferase 2B		 0.59 0.32 -0.32
122 AT2G05180 cytochrome P450, family 705, subfamily A, polypeptide 6 cytochrome P450, family 705,
subfamily A, polypeptide 6		 -0.59 0.33 -0.32
123 AT1G33612 Leucine-rich repeat (LRR) family protein -0.59 0.33 -0.3
124 AT1G09230 RNA-binding (RRM/RBD/RNP motifs) family protein -0.59 0.32 -0.31
125 AT4G15200 formin 3 formin 3, formin 3 0.59 0.34 -0.32
126 AT4G36620 GATA transcription factor 19 GATA transcription factor 19,
hanaba taranu like 2		 -0.59 0.31 -0.33
127 AT3G29796 unknown protein; Has 28 Blast hits to 20 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 18; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 9 (source: NCBI
BLink).		 -0.59 0.32 -0.31
128 AT4G38400 expansin-like A2 expansin-like A2, ATEXPL2, ATHEXP
BETA 2.2, expansin-like A2,
EXPANSIN L2		 0.59 0.33 -0.32
129 AT3G08890 Protein of unknown function, DUF538 0.59 0.33 -0.32
130 AT4G32540 Flavin-binding monooxygenase family protein YUCCA, YUCCA 1 0.59 0.31 -0.32
131 AT5G02070 Protein kinase family protein -0.59 0.3 -0.3
132 AT2G40880 cystatin A cystatin A, cystatin A, FL3-27 0.59 0.32 -0.31
133 AT2G24950 Protein of Unknown Function (DUF239) 0.59 0.31 -0.32
134 AT1G67120 ATPases;nucleotide binding;ATP
binding;nucleoside-triphosphatases;transcription factor
binding		 -0.59 0.33 -0.33
135 AT5G24010 Protein kinase superfamily protein -0.59 0.29 -0.3
136 AT3G32940 RNA-binding KH domain-containing protein -0.58 0.34 -0.31
137 AT3G42070 transposable element gene -0.58 0.3 -0.31
138 AT3G53820 C2H2 and C2HC zinc fingers superfamily protein -0.58 0.31 -0.33
139 AT2G25930 hydroxyproline-rich glycoprotein family protein EARLY FLOWERING 3, PYK20 -0.58 0.3 -0.33
140 AT2G22530 Alkaline-phosphatase-like family protein -0.58 0.29 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
141 C0028 3-Aminopiperidin-2-one (R,S)-3-Aminopiperidin-2-one - - -0.61 0.32 -0.3