AT3G16857 : response regulator 1
Query Information
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AGICode AT3G16857
Description response regulator 1
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G16857 response regulator 1 response regulator 1, response
regulator 1		 1 0.33 -0.33
2 AT1G58030 cationic amino acid transporter 2 cationic amino acid transporter 2 0.84 0.33 -0.32
3 AT1G26930 Galactose oxidase/kelch repeat superfamily protein 0.81 0.31 -0.3
4 AT5G35370 S-locus lectin protein kinase family protein 0.81 0.33 -0.32
5 AT3G02920 Replication protein A, subunit RPA32 ATRPA32B, RPA32B -0.81 0.31 -0.32
6 AT5G65810 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G49720.2); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 cotton Golgi-related 3 -0.8 0.32 -0.34
7 AT5G66170 sulfurtransferase 18 sulfurtransferase 18 0.8 0.3 -0.33
8 AT1G30690 Sec14p-like phosphatidylinositol transfer family protein -0.79 0.32 -0.33
9 AT2G16720 myb domain protein 7 ARABIDOPSIS THALIANA MYB DOMAIN
PROTEIN 7, ATY49, myb domain
protein 7		 0.78 0.31 -0.31
10 AT1G55020 lipoxygenase 1 ARABIDOPSIS LIPOXYGENASE 1,
lipoxygenase 1		 0.78 0.31 -0.33
11 AT5G59870 histone H2A 6 histone H2A 6 -0.78 0.31 -0.32
12 AT1G63440 heavy metal atpase 5 heavy metal atpase 5 0.77 0.31 -0.31
13 AT5G19570 unknown protein; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0546
(InterPro:IPR018908); Has 1807 Blast hits to 1807 proteins
in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736;
Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes -
339 (source: NCBI BLink).		 -0.77 0.33 -0.33
14 AT1G19680 RING/U-box superfamily protein 0.77 0.33 -0.3
15 AT5G55120 galactose-1-phosphate guanylyltransferase
(GDP)s;GDP-D-glucose phosphorylases;quercetin
4'-O-glucosyltransferases		 VITAMIN C DEFECTIVE 5 0.76 0.32 -0.32
16 AT3G23240 ethylene response factor 1 ETHYLENE RESPONSE FACTOR 1,
ethylene response factor 1		 0.76 0.33 -0.29
17 AT3G52940 Ergosterol biosynthesis ERG4/ERG24 family EXTRA-LONG-LIFESPAN 1, FACKEL,
HYD2		 -0.76 0.3 -0.3
18 AT1G70300 K+ uptake permease 6 K+ uptake permease 6 0.76 0.3 -0.33
19 AT4G32150 vesicle-associated membrane protein 711 vesicle-associated membrane
protein 711, vesicle-associated
membrane protein 711		 0.76 0.31 -0.3
20 AT2G30200 catalytics;transferases;[acyl-carrier-protein]
S-malonyltransferases;binding		 EMBRYO DEFECTIVE 3147 -0.75 0.31 -0.31
21 AT2G45470 FASCICLIN-like arabinogalactan protein 8 ARABINOGALACTAN PROTEIN 8,
FASCICLIN-like arabinogalactan
protein 8		 -0.75 0.32 -0.34
22 AT5G46280 Minichromosome maintenance (MCM2/3/5) family protein MINICHROMOSOME MAINTENANCE 3 -0.75 0.31 -0.34
23 AT5G66530 Galactose mutarotase-like superfamily protein -0.75 0.3 -0.32
24 AT1G79690 nudix hydrolase homolog 3 nudix hydrolase homolog 3, nudix
hydrolase homolog 3		 0.75 0.34 -0.31
25 AT5G62210 Embryo-specific protein 3, (ATS3) -0.74 0.32 -0.31
26 AT3G20250 pumilio 5 pumilio 5, pumilio 5 0.74 0.31 -0.33
27 AT1G18260 HCP-like superfamily protein EMS-mutagenized bri1 suppressor 5,
HRD3A		 0.74 0.33 -0.31
28 AT1G10780 F-box/RNI-like superfamily protein -0.74 0.31 -0.31
29 AT1G28580 GDSL-like Lipase/Acylhydrolase superfamily protein 0.74 0.32 -0.34
30 AT3G10550 Myotubularin-like phosphatases II superfamily Arabidopsis thaliana myotubularin
1, myotubularin 1		 0.74 0.31 -0.3
31 AT5G15050 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 -0.74 0.32 -0.32
32 AT1G48790 associated molecule with the SH3 domain of STAM 1 associated molecule with the SH3
domain of STAM 1		 0.74 0.31 -0.3
33 AT5G08020 RPA70-kDa subunit B ARABIDOPSIS THALIANA RPA70-KDA
SUBUNIT B, RPA70-kDa subunit B		 -0.74 0.33 -0.33
34 AT3G10610 Ribosomal S17 family protein -0.74 0.3 -0.33
35 AT2G04940 scramblase-related 0.74 0.29 -0.33
36 AT2G30360 SOS3-interacting protein 4 CBL-INTERACTING PROTEIN KINASE 11,
PROTEIN KINASE SOS2-LIKE 5,
SOS3-interacting protein 4,
SNF1-RELATED PROTEIN KINASE 3.22		 0.73 0.32 -0.31
37 AT3G06810 acyl-CoA dehydrogenase-related IBA-RESPONSE 3 0.73 0.31 -0.31
38 AT4G19380 Long-chain fatty alcohol dehydrogenase family protein -0.73 0.35 -0.31
39 AT4G30220 small nuclear ribonucleoprotein F small nuclear ribonucleoprotein F -0.73 0.31 -0.32
40 AT5G51550 EXORDIUM like 3 EXORDIUM like 3 -0.73 0.31 -0.31
41 AT2G02970 GDA1/CD39 nucleoside phosphatase family protein 0.73 0.29 -0.34
42 AT3G46940 DUTP-PYROPHOSPHATASE-LIKE 1 DUTP-PYROPHOSPHATASE-LIKE 1 -0.73 0.32 -0.33
43 AT5G23420 high-mobility group box 6 high-mobility group box 6 -0.73 0.32 -0.29
44 AT2G43630 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast
thylakoid membrane, chloroplast, nucleus, chloroplast
envelope; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: glycine-rich protein (TAIR:AT3G59640.2); Has 67
Blast hits to 67 proteins in 20 species: Archae - 0;
Bacteria - 4; Metazoa - 9; Fungi - 1; Plants - 49; Viruses
- 2; Other Eukaryotes - 2 (source: NCBI BLink).		 -0.73 0.31 -0.3
45 AT4G14320 Zinc-binding ribosomal protein family protein -0.73 0.3 -0.32
46 AT2G29550 tubulin beta-7 chain tubulin beta-7 chain -0.73 0.32 -0.28
47 AT2G22230 Thioesterase superfamily protein -0.73 0.31 -0.31
48 AT1G30270 CBL-interacting protein kinase 23 ATCIPK23, CBL-interacting protein
kinase 23, LOW-K+-SENSITIVE 1,
SOS2-like protein kinase 17,
SNF1-RELATED PROTEIN KINASE 3.23		 0.73 0.31 -0.3
49 AT1G11545 xyloglucan endotransglucosylase/hydrolase 8 xyloglucan
endotransglucosylase/hydrolase 8		 -0.73 0.32 -0.31
50 AT1G11800 endonuclease/exonuclease/phosphatase family protein -0.72 0.31 -0.32
51 AT2G24490 replicon protein A2 ATRPA2, ATRPA32A, SUPPRESSOR OF
ROS1, replicon protein A2, RPA32A		 -0.72 0.33 -0.29
52 AT4G12980 Auxin-responsive family protein -0.72 0.33 -0.31
53 AT5G10400 Histone superfamily protein -0.72 0.3 -0.32
54 AT4G27860 vacuolar iron transporter (VIT) family protein 0.72 0.33 -0.31
55 AT1G48610 AT hook motif-containing protein -0.72 0.31 -0.33
56 AT1G04530 Tetratricopeptide repeat (TPR)-like superfamily protein tetratricopeptide repeat 4 -0.72 0.31 -0.32
57 AT3G60300 RWD domain-containing protein 0.72 0.32 -0.32
58 AT2G48020 Major facilitator superfamily protein 0.72 0.29 -0.32
59 AT1G20490 AMP-dependent synthetase and ligase family protein 0.71 0.32 -0.32
60 AT4G30680 Initiation factor eIF-4 gamma, MA3 -0.71 0.34 -0.3
61 AT5G13010 RNA helicase family protein embryo defective 3011 0.71 0.31 -0.33
62 AT4G38370 Phosphoglycerate mutase family protein -0.71 0.31 -0.3
63 AT1G24360 NAD(P)-binding Rossmann-fold superfamily protein -0.71 0.33 -0.32
64 AT1G55850 cellulose synthase like E1 ATCSLE1, cellulose synthase like
E1		 0.71 0.3 -0.31
65 AT1G01540 Protein kinase superfamily protein -0.71 0.3 -0.32
66 AT2G18290 anaphase promoting complex 10 anaphase promoting complex 10,
EMBRYO DEFECTIVE 2783		 -0.71 0.31 -0.32
67 AT2G07690 Minichromosome maintenance (MCM2/3/5) family protein MINICHROMOSOME MAINTENANCE 5 -0.71 0.3 -0.3
68 AT5G02880 ubiquitin-protein ligase 4 ubiquitin-protein ligase 4 0.71 0.32 -0.31
69 AT1G68810 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.71 0.32 -0.29
70 AT1G65660 Pre-mRNA splicing Prp18-interacting factor SWELLMAP 1 0.71 0.3 -0.32
71 AT1G20580 Small nuclear ribonucleoprotein family protein -0.71 0.34 -0.31
72 AT2G35960 NDR1/HIN1-like 12 NDR1/HIN1-like 12 -0.7 0.33 -0.33
73 AT3G13674 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED
DURING: 11 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G55205.1); Has 76 Blast
hits to 76 proteins in 10 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.7 0.32 -0.31
74 AT5G58730 pfkB-like carbohydrate kinase family protein 0.7 0.32 -0.31
75 AT1G48580 unknown protein; Has 91 Blast hits to 91 proteins in 40
species: Archae - 0; Bacteria - 0; Metazoa - 49; Fungi - 0;
Plants - 28; Viruses - 0; Other Eukaryotes - 14 (source:
NCBI BLink).		 -0.7 0.31 -0.3
76 AT1G63720 BEST Arabidopsis thaliana protein match is:
hydroxyproline-rich glycoprotein family protein
(TAIR:AT5G52430.1); Has 490 Blast hits to 394 proteins in
96 species: Archae - 0; Bacteria - 2; Metazoa - 132; Fungi
- 88; Plants - 175; Viruses - 14; Other Eukaryotes - 79
(source: NCBI BLink).		 0.7 0.32 -0.32
77 AT5G08040 mitochondrial import receptor subunit TOM5 homolog mitochondrial import receptor
subunit TOM5 homolog		 -0.7 0.33 -0.29
78 AT1G27150 Tetratricopeptide repeat (TPR)-like superfamily protein 0.7 0.3 -0.32
79 AT5G60780 nitrate transporter 2.3 ARABIDOPSIS THALIANA NITRATE
TRANSPORTER 2.3, nitrate
transporter 2.3		 -0.7 0.33 -0.3
80 AT3G26000 Ribonuclease inhibitor 0.7 0.29 -0.3
81 AT4G15330 cytochrome P450, family 705, subfamily A, polypeptide 1 cytochrome P450, family 705,
subfamily A, polypeptide 1		 0.7 0.35 -0.31
82 AT5G06430 Thioredoxin superfamily protein -0.7 0.32 -0.33
83 AT4G18030 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.69 0.32 -0.34
84 AT1G23850 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G23840.1); Has 47 Blast hits
to 40 proteins in 5 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 47; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.69 0.32 -0.33
85 AT1G26730 EXS (ERD1/XPR1/SYG1) family protein 0.69 0.32 -0.31
86 AT1G78530 Protein kinase superfamily protein -0.69 0.32 -0.32
87 AT3G01770 bromodomain and extraterminal domain protein 10 bromodomain and extraterminal
domain protein 10, bromodomain and
extraterminal domain protein 10		 0.69 0.32 -0.3
88 AT2G28910 CAX interacting protein 4 CAX interacting protein 4 0.69 0.33 -0.3
89 AT3G19420 PTEN 2 PTEN 2, PTEN 2, phosphatase and
TENsin homolog deleted on
chromosome ten 2A		 0.69 0.31 -0.33
90 AT2G43420 3-beta hydroxysteroid dehydrogenase/isomerase family
protein		 0.69 0.32 -0.3
91 AT1G30825 Arp2/3 complex, 34 kD subunit p34-Arc ACTIN-RELATED PROTEIN C2A,
DISTORTED TRICHOMES 2		 -0.69 0.29 -0.31
92 AT3G21190 O-fucosyltransferase family protein -0.69 0.33 -0.34
93 AT1G76410 RING/U-box superfamily protein ATL8 0.69 0.31 -0.29
94 AT5G02170 Transmembrane amino acid transporter family protein 0.69 0.32 -0.31
95 AT2G40550 E2F target gene 1 E2F target gene 1 -0.69 0.33 -0.34
96 AT4G34540 NmrA-like negative transcriptional regulator family protein 0.69 0.31 -0.31
97 AT5G42100 beta-1,3-glucanase_putative ARABIDOPSIS THALIANA
BETA-1,3-GLUCANASE_PUTATIVE,
beta-1,3-glucanase_putative		 -0.69 0.33 -0.32
98 AT2G04780 FASCICLIN-like arabinoogalactan 7 FASCICLIN-like arabinoogalactan 7 -0.69 0.31 -0.32
99 AT1G71750 Hypoxanthine-guanine phosphoribosyltransferase Hypoxanthine-guanine
phosphoribosyltransferase		 -0.68 0.32 -0.32
100 AT3G27360 Histone superfamily protein -0.68 0.3 -0.32
101 AT5G18440 CONTAINS InterPro DOMAIN/s: Nuclear fragile X mental
retardation-interacting protein 1, conserved region
(InterPro:IPR019496); Has 1333 Blast hits to 1211 proteins
in 205 species: Archae - 0; Bacteria - 137; Metazoa - 339;
Fungi - 162; Plants - 70; Viruses - 6; Other Eukaryotes -
619 (source: NCBI BLink).		 AtNUFIP, nuclear FMRP-interacting
protein		 -0.68 0.31 -0.32
102 AT5G65110 acyl-CoA oxidase 2 acyl-CoA oxidase 2, ATACX2 0.68 0.33 -0.32
103 AT4G15093 catalytic LigB subunit of aromatic ring-opening dioxygenase
family		 0.68 0.32 -0.33
104 AT5G16230 Plant stearoyl-acyl-carrier-protein desaturase family
protein		 -0.68 0.32 -0.29
105 AT1G33810 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane, chloroplast, chloroplast
envelope; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 39 Blast hits to 39 proteins
in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.68 0.34 -0.3
106 AT1G64640 early nodulin-like protein 8 AtENODL8, early nodulin-like
protein 8		 -0.68 0.32 -0.32
107 AT2G25490 EIN3-binding F box protein 1 EIN3-binding F box protein 1, FBL6 0.68 0.33 -0.33
108 AT1G53120 RNA-binding S4 domain-containing protein -0.68 0.33 -0.31
109 AT3G21240 4-coumarate:CoA ligase 2 4-coumarate:CoA ligase 2, AT4CL2 0.68 0.31 -0.3
110 AT1G65060 4-coumarate:CoA ligase 3 4-coumarate:CoA ligase 3 -0.68 0.33 -0.33
111 AT2G16790 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.68 0.29 -0.33
112 AT1G08750 Peptidase C13 family -0.68 0.32 -0.31
113 AT5G19250 Glycoprotein membrane precursor GPI-anchored -0.68 0.31 -0.31
114 AT1G69360 Plant protein of unknown function (DUF863) 0.68 0.3 -0.29
115 AT1G24120 ARG1-like 1 ARG1-like 1 -0.68 0.34 -0.33
116 AT3G62840 Small nuclear ribonucleoprotein family protein -0.68 0.31 -0.32
117 AT5G25770 alpha/beta-Hydrolases superfamily protein 0.68 0.31 -0.31
118 AT3G45050 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 26 Blast hits to 26 proteins
in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.68 0.3 -0.33
119 AT5G66180 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.67 0.31 -0.32
120 AT2G43540 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; Has 27
Blast hits to 27 proteins in 12 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 27; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.67 0.32 -0.32
121 AT5G05340 Peroxidase superfamily protein 0.67 0.31 -0.32
122 AT3G20660 organic cation/carnitine transporter4 organic cation/carnitine
transporter4, organic
cation/carnitine transporter4		 0.67 0.32 -0.32
123 AT1G17680 tetratricopeptide repeat (TPR)-containing protein 0.67 0.31 -0.33
124 AT5G42580 cytochrome P450, family 705, subfamily A, polypeptide 12 cytochrome P450, family 705,
subfamily A, polypeptide 12		 0.67 0.33 -0.32
125 AT1G59740 Major facilitator superfamily protein 0.67 0.29 -0.3
126 AT5G13080 WRKY DNA-binding protein 75 ARABIDOPSIS THALIANA WRKY
DNA-BINDING PROTEIN 75, WRKY
DNA-binding protein 75		 0.67 0.29 -0.31
127 AT2G22330 cytochrome P450, family 79, subfamily B, polypeptide 3 cytochrome P450, family 79,
subfamily B, polypeptide 3		 0.67 0.33 -0.31
128 AT2G36960 TSL-kinase interacting protein 1 TSL-kinase interacting protein 1 0.67 0.33 -0.3
129 AT3G62650 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G47485.1); Has 57 Blast hits
to 57 proteins in 13 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.67 0.32 -0.3
130 AT1G59650 Protein of unknown function (DUF1336) CW14 0.67 0.3 -0.31
131 AT5G53990 UDP-Glycosyltransferase superfamily protein 0.67 0.3 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
132 C0158 MST_1480.5 - - - -0.7 0.45 -0.43