AGICode | AT3G15110 |
Description | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3082 (InterPro:IPR021434); Has 77 Blast hits to 77 proteins in 38 species: Archae - 0; Bacteria - 37; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT3G15110 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3082 (InterPro:IPR021434); Has 77 Blast hits to 77 proteins in 38 species: Archae - 0; Bacteria - 37; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). |
1 | 0.33 | -0.31 | |||
2 | AT4G39460 | S-adenosylmethionine carrier 1 | S-adenosylmethionine carrier 1, SAM TRANSPORTER1 |
0.9 | 0.34 | -0.32 | ||
3 | AT3G62030 | rotamase CYP 4 | cyclophilin 20-3, rotamase CYP 4 | 0.9 | 0.31 | -0.31 | ||
4 | AT4G01310 | Ribosomal L5P family protein | 0.89 | 0.33 | -0.31 | |||
5 | AT2G48070 | resistance to phytophthora 1 | RESISTANCE TO PHYTOPHTHORA 1 | 0.88 | 0.33 | -0.31 | ||
6 | AT5G30510 | ribosomal protein S1 | ARRPS1, ribosomal protein S1 | 0.88 | 0.31 | -0.31 | ||
7 | AT1G75350 | Ribosomal protein L31 | embryo defective 2184 | 0.88 | 0.31 | -0.31 | ||
8 | AT5G50250 | chloroplast RNA-binding protein 31B | chloroplast RNA-binding protein 31B |
0.87 | 0.31 | -0.33 | ||
9 | AT3G24590 | plastidic type i signal peptidase 1 | plastidic type i signal peptidase 1 |
0.87 | 0.29 | -0.3 | ||
10 | AT5G63310 | nucleoside diphosphate kinase 2 | ARABIDOPSIS NUCLEOSIDE DIPHOSPHATE KINASE 2, NUCLEOSIDE DIPHOSPHATE KINASE IA, NDPK IA IA, NDP KINASE 1A, nucleoside diphosphate kinase 2 |
0.87 | 0.31 | -0.34 | ||
11 | AT3G52960 | Thioredoxin superfamily protein | 0.87 | 0.31 | -0.3 | |||
12 | AT1G17650 | glyoxylate reductase 2 | glyoxylate reductase 2, GLYOXYLATE REDUCTASE 2 |
0.86 | 0.32 | -0.31 | ||
13 | AT1G74730 | Protein of unknown function (DUF1118) | 0.86 | 0.33 | -0.33 | |||
14 | AT2G43560 | FKBP-like peptidyl-prolyl cis-trans isomerase family protein |
0.86 | 0.3 | -0.32 | |||
15 | AT2G27680 | NAD(P)-linked oxidoreductase superfamily protein | 0.86 | 0.31 | -0.32 | |||
16 | AT2G22230 | Thioesterase superfamily protein | 0.86 | 0.31 | -0.31 | |||
17 | AT4G24770 | 31-kDa RNA binding protein | ARABIDOPSIS THALIANA RNA BINDING PROTEIN, APPROXIMATELY 31 KD, ATRBP33, CP31, 31-kDa RNA binding protein |
0.86 | 0.33 | -0.31 | ||
18 | AT2G21280 | NAD(P)-binding Rossmann-fold superfamily protein | ATSULA, GIANT CHLOROPLAST 1, SULA | 0.86 | 0.32 | -0.31 | ||
19 | AT3G63410 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
ALBINO OR PALE GREEN MUTANT 1, E37, INNER ENVELOPE PROTEIN 37, VITAMIN E DEFECTIVE 3 |
0.86 | 0.31 | -0.29 | ||
20 | AT5G52520 | Class II aaRS and biotin synthetases superfamily protein | OVULE ABORTION 6, PROLYL-TRNA SYNTHETASE 1 |
0.85 | 0.33 | -0.31 | ||
21 | AT1G69740 | Aldolase superfamily protein | HEMB1 | 0.85 | 0.32 | -0.3 | ||
22 | AT2G45770 | signal recognition particle receptor protein, chloroplast (FTSY) |
CPFTSY, FERRIC CHELATE REDUCTASE DEFECTIVE 4 |
0.85 | 0.34 | -0.33 | ||
23 | AT4G34190 | stress enhanced protein 1 | stress enhanced protein 1 | 0.85 | 0.31 | -0.31 | ||
24 | AT3G08010 | RNA binding | ATAB2 | 0.84 | 0.31 | -0.3 | ||
25 | AT1G48520 | GLU-ADT subunit B | GLU-ADT subunit B | 0.84 | 0.29 | -0.33 | ||
26 | AT1G04110 | Subtilase family protein | STOMATAL DENSITY AND DISTRIBUTION | 0.84 | 0.3 | -0.32 | ||
27 | AT4G33680 | Pyridoxal phosphate (PLP)-dependent transferases superfamily protein |
ABERRANT GROWTH AND DEATH 2 | 0.84 | 0.32 | -0.31 | ||
28 | AT2G39140 | pseudouridine synthase family protein | PIGMENT DEFECTIVE 328, SUPPRESSOR OF VARIEGATION 1 |
0.84 | 0.29 | -0.32 | ||
29 | AT4G01690 | Flavin containing amine oxidoreductase family | HEMG1, PPO1, PPOX | 0.84 | 0.31 | -0.3 | ||
30 | AT5G47840 | adenosine monophosphate kinase | adenosine monophosphate kinase | 0.84 | 0.31 | -0.33 | ||
31 | AT3G63490 | Ribosomal protein L1p/L10e family | EMBRYO DEFECTIVE 3126 | 0.84 | 0.32 | -0.33 | ||
32 | AT1G74970 | ribosomal protein S9 | ribosomal protein S9, TWN3 | 0.84 | 0.32 | -0.33 | ||
33 | AT3G49260 | IQ-domain 21 | IQ-domain 21 | 0.83 | 0.31 | -0.32 | ||
34 | AT4G38225 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.83 | 0.33 | -0.32 | |||
35 | AT1G16080 | unknown protein; LOCATED IN: apoplast, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; Has 81 Blast hits to 81 proteins in 28 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). |
0.83 | 0.32 | -0.3 | |||
36 | AT5G39830 | Trypsin family protein with PDZ domain | DEG8, DEG PROTEASE 8 | 0.83 | 0.33 | -0.31 | ||
37 | AT2G29360 | NAD(P)-binding Rossmann-fold superfamily protein | 0.83 | 0.32 | -0.31 | |||
38 | AT5G08650 | Small GTP-binding protein | 0.83 | 0.32 | -0.32 | |||
39 | AT2G35370 | glycine decarboxylase complex H | glycine decarboxylase complex H | 0.82 | 0.32 | -0.33 | ||
40 | AT1G24610 | Rubisco methyltransferase family protein | 0.82 | 0.29 | -0.3 | |||
41 | AT4G00180 | Plant-specific transcription factor YABBY family protein | YABBY3 | 0.82 | 0.31 | -0.3 | ||
42 | AT3G26060 | Thioredoxin superfamily protein | ATPRX Q, peroxiredoxin Q | 0.82 | 0.34 | -0.31 | ||
43 | AT3G49900 | Phototropic-responsive NPH3 family protein | 0.82 | 0.3 | -0.32 | |||
44 | AT5G27560 | Domain of unknown function (DUF1995) | 0.82 | 0.31 | -0.3 | |||
45 | AT2G26900 | Sodium Bile acid symporter family | bile acid:sodium symporter family protein 2 |
0.81 | 0.33 | -0.3 | ||
46 | AT3G46100 | Histidyl-tRNA synthetase 1 | Histidyl-tRNA synthetase 1, Histidyl-tRNA synthetase 1 |
0.81 | 0.32 | -0.33 | ||
47 | AT1G32200 | phospholipid/glycerol acyltransferase family protein | ACYLTRANSFERASE 1, ATS1 | 0.81 | 0.31 | -0.32 | ||
48 | AT5G53210 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
SPEECHLESS | 0.81 | 0.29 | -0.32 | ||
49 | AT4G12980 | Auxin-responsive family protein | 0.81 | 0.31 | -0.3 | |||
50 | AT3G15690 | Single hybrid motif superfamily protein | 0.81 | 0.33 | -0.3 | |||
51 | AT1G52220 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: photosystem I P subunit (TAIR:AT2G46820.2); Has 291 Blast hits to 291 proteins in 50 species: Archae - 0; Bacteria - 90; Metazoa - 0; Fungi - 0; Plants - 200; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). |
0.81 | 0.32 | -0.31 | |||
52 | AT3G16140 | photosystem I subunit H-1 | photosystem I subunit H-1 | 0.81 | 0.32 | -0.34 | ||
53 | AT3G27160 | Ribosomal protein S21 family protein | GLUCOSE HYPERSENSITIVE 1 | 0.81 | 0.32 | -0.3 | ||
54 | AT3G46630 | Protein of unknown function (DUF3223) | 0.81 | 0.3 | -0.34 | |||
55 | AT4G25370 | Double Clp-N motif protein | 0.81 | 0.3 | -0.31 | |||
56 | AT3G16450 | Mannose-binding lectin superfamily protein | Jacalin-related lectin 33 | -0.8 | 0.33 | -0.32 | ||
57 | AT5G66170 | sulfurtransferase 18 | sulfurtransferase 18 | -0.8 | 0.32 | -0.32 | ||
58 | AT4G34600 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: pollen tube growth; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: M germinated pollen stage, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G16385.1); Has 17 Blast hits to 17 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 17; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.8 | 0.32 | -0.32 | |||
59 | AT4G12080 | AT-hook motif nuclear-localized protein 1 | AT-hook motif nuclear-localized protein 1, ATAHL1 |
-0.77 | 0.31 | -0.3 | ||
60 | AT1G33750 | Terpenoid cyclases/Protein prenyltransferases superfamily protein |
-0.76 | 0.33 | -0.3 | |||
61 | AT2G39350 | ABC-2 type transporter family protein | ATP-binding cassette G1 | -0.76 | 0.33 | -0.32 | ||
62 | AT3G61990 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
O-MTase family 3 protein | -0.76 | 0.34 | -0.33 | ||
63 | AT1G30270 | CBL-interacting protein kinase 23 | ATCIPK23, CBL-interacting protein kinase 23, LOW-K+-SENSITIVE 1, SOS2-like protein kinase 17, SNF1-RELATED PROTEIN KINASE 3.23 |
-0.75 | 0.31 | -0.32 | ||
64 | AT1G69526 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
-0.75 | 0.29 | -0.31 | |||
65 | AT1G14240 | GDA1/CD39 nucleoside phosphatase family protein | -0.74 | 0.31 | -0.31 | |||
66 | AT1G78960 | lupeol synthase 2 | lupeol synthase 2, lupeol synthase 2 |
-0.74 | 0.32 | -0.31 | ||
67 | AT2G28110 | Exostosin family protein | FRAGILE FIBER 8, IRREGULAR XYLEM 7 | -0.74 | 0.32 | -0.31 | ||
68 | AT3G21240 | 4-coumarate:CoA ligase 2 | 4-coumarate:CoA ligase 2, AT4CL2 | -0.74 | 0.31 | -0.33 | ||
69 | AT5G20960 | aldehyde oxidase 1 | aldehyde oxidase 1, aldehyde oxidase 1, aldehyde oxidase alpha, ARABIDOPSIS THALIANA ALDEHYDE OXIDASE 1, ATAO, Arabidopsis thaliana aldehyde oxidase 1 |
-0.74 | 0.3 | -0.31 | ||
70 | AT1G22440 | Zinc-binding alcohol dehydrogenase family protein | -0.74 | 0.31 | -0.33 | |||
71 | AT3G19200 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G34419.1); Has 51 Blast hits to 51 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 51; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.74 | 0.33 | -0.31 | |||
72 | AT3G12760 | CONTAINS InterPro DOMAIN/s: Defective-in-cullin neddylation protein (InterPro:IPR014764), Protein of unknown function DUF298 (InterPro:IPR005176), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF298) (TAIR:AT1G15860.2); Has 857 Blast hits to 855 proteins in 202 species: Archae - 0; Bacteria - 0; Metazoa - 482; Fungi - 154; Plants - 139; Viruses - 0; Other Eukaryotes - 82 (source: NCBI BLink). |
-0.73 | 0.34 | -0.31 | |||
73 | AT5G49880 | mitotic checkpoint family protein | -0.73 | 0.33 | -0.32 | |||
74 | AT5G12330 | Lateral root primordium (LRP) protein-related | LATERAL ROOT PRIMORDIUM 1 | -0.73 | 0.34 | -0.33 | ||
75 | AT5G44380 | FAD-binding Berberine family protein | -0.72 | 0.33 | -0.31 | |||
76 | AT5G05640 | nucleoprotein-related | -0.72 | 0.3 | -0.3 | |||
77 | AT5G01830 | ARM repeat superfamily protein | -0.72 | 0.31 | -0.33 | |||
78 | AT5G53990 | UDP-Glycosyltransferase superfamily protein | -0.72 | 0.33 | -0.33 | |||
79 | AT1G09380 | nodulin MtN21 /EamA-like transporter family protein | -0.71 | 0.31 | -0.34 | |||
80 | AT1G23120 | Polyketide cyclase/dehydrase and lipid transport superfamily protein |
-0.7 | 0.31 | -0.33 | |||
81 | AT1G07260 | UDP-glucosyl transferase 71C3 | UDP-glucosyl transferase 71C3 | -0.7 | 0.31 | -0.31 | ||
82 | AT3G15300 | VQ motif-containing protein | -0.7 | 0.32 | -0.35 | |||
83 | AT5G65660 | hydroxyproline-rich glycoprotein family protein | -0.7 | 0.31 | -0.31 | |||
84 | AT2G22330 | cytochrome P450, family 79, subfamily B, polypeptide 3 | cytochrome P450, family 79, subfamily B, polypeptide 3 |
-0.7 | 0.33 | -0.32 | ||
85 | AT3G04570 | AT-hook motif nuclear-localized protein 19 | AT-hook motif nuclear-localized protein 19 |
-0.69 | 0.32 | -0.32 | ||
86 | AT3G03170 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G24890.1); Has 184 Blast hits to 184 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 184; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.69 | 0.31 | -0.33 | |||
87 | AT5G24600 | Protein of unknown function, DUF599 | -0.69 | 0.31 | -0.33 | |||
88 | AT2G38370 | Plant protein of unknown function (DUF827) | -0.69 | 0.31 | -0.33 | |||
89 | AT4G34860 | Plant neutral invertase family protein | alkaline/neutral invertase B | -0.69 | 0.32 | -0.32 | ||
90 | AT5G01870 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
-0.69 | 0.32 | -0.32 | |||
91 | AT2G16790 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
-0.69 | 0.31 | -0.32 | |||
92 | AT5G25770 | alpha/beta-Hydrolases superfamily protein | -0.69 | 0.32 | -0.31 | |||
93 | AT2G41070 | Basic-leucine zipper (bZIP) transcription factor family protein |
ATBZIP12, DPBF4, ENHANCED EM LEVEL | -0.69 | 0.33 | -0.32 | ||
94 | AT4G37295 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: stem, root, leaf; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.69 | 0.31 | -0.28 | |||
95 | AT2G23050 | Phototropic-responsive NPH3 family protein | MAB4/ENP/NPY1-LIKE 4, NAKED PINS IN YUC MUTANTS 4 |
-0.68 | 0.32 | -0.3 | ||
96 | AT5G65210 | bZIP transcription factor family protein | TGA1 | -0.68 | 0.31 | -0.31 | ||
97 | AT5G48940 | Leucine-rich repeat transmembrane protein kinase family protein |
-0.68 | 0.32 | -0.31 | |||
98 | AT4G08780 | Peroxidase superfamily protein | -0.68 | 0.31 | -0.31 | |||
99 | AT5G38030 | MATE efflux family protein | -0.68 | 0.3 | -0.32 | |||
100 | AT1G53180 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15115.1); Has 58 Blast hits to 56 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 4; Plants - 29; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). |
-0.68 | 0.34 | -0.31 | |||
101 | AT3G24240 | Leucine-rich repeat receptor-like protein kinase family protein |
-0.67 | 0.31 | -0.31 | |||
102 | AT3G29035 | NAC domain containing protein 3 | Arabidopsis NAC domain containing protein 59, NAC domain containing protein 3, NAC domain containing protein 3, ORE1 SISTER1 |
-0.67 | 0.34 | -0.31 | ||
103 | AT2G22680 | Zinc finger (C3HC4-type RING finger) family protein | WAV3 homolog 1 | -0.67 | 0.32 | -0.32 | ||
104 | AT1G31950 | Terpenoid cyclases/Protein prenyltransferases superfamily protein |
-0.67 | 0.34 | -0.3 | |||
105 | AT4G28410 | Tyrosine transaminase family protein | -0.67 | 0.32 | -0.32 | |||
106 | AT1G01640 | BTB/POZ domain-containing protein | -0.67 | 0.3 | -0.32 | |||
107 | AT4G23690 | Disease resistance-responsive (dirigent-like protein) family protein |
-0.67 | 0.31 | -0.32 | |||
108 | AT3G14680 | cytochrome P450, family 72, subfamily A, polypeptide 14 | cytochrome P450, family 72, subfamily A, polypeptide 14 |
-0.67 | 0.3 | -0.31 | ||
109 | AT4G11350 | Protein of unknown function (DUF604) | -0.66 | 0.33 | -0.28 | |||
110 | AT3G05920 | Heavy metal transport/detoxification superfamily protein | -0.66 | 0.32 | -0.31 | |||
111 | AT1G59740 | Major facilitator superfamily protein | -0.66 | 0.28 | -0.32 | |||
112 | AT1G05577 | Domain of unknown function (DUF966) | -0.66 | 0.33 | -0.31 | |||
113 | AT2G42430 | lateral organ boundaries-domain 16 | ASYMMETRIC LEAVES2-LIKE 18, lateral organ boundaries-domain 16 |
-0.66 | 0.3 | -0.31 | ||
114 | AT4G27260 | Auxin-responsive GH3 family protein | GH3.5, WES1 | -0.66 | 0.33 | -0.3 | ||
115 | AT3G12500 | basic chitinase | basic chitinase, B-CHI, CHI-B, basic chitinase, PATHOGENESIS-RELATED 3, PATHOGENESIS-RELATED 3 |
-0.65 | 0.34 | -0.31 | ||
116 | AT2G46950 | cytochrome P450, family 709, subfamily B, polypeptide 2 | cytochrome P450, family 709, subfamily B, polypeptide 2 |
-0.65 | 0.31 | -0.31 | ||
117 | AT2G41800 | Protein of unknown function, DUF642 | -0.65 | 0.32 | -0.32 | |||
118 | AT5G61060 | histone deacetylase 5 | ATHDA5, histone deacetylase 5, HDA5 |
-0.65 | 0.32 | -0.31 | ||
119 | AT2G24260 | LJRHL1-like 1 | LJRHL1-like 1 | -0.65 | 0.35 | -0.3 | ||
120 | AT5G65640 | beta HLH protein 93 | beta HLH protein 93 | -0.64 | 0.32 | -0.32 | ||
121 | AT5G47750 | D6 protein kinase like 2 | D6 protein kinase like 2, PK5 | -0.64 | 0.31 | -0.33 | ||
122 | AT5G02420 | unknown protein; Has 90 Blast hits to 90 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.64 | 0.32 | -0.29 | |||
123 | AT5G48110 | Terpenoid cyclases/Protein prenyltransferases superfamily protein |
-0.64 | 0.31 | -0.3 | |||
124 | AT4G09940 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
-0.64 | 0.32 | -0.3 |