AT3G22940 : -
Query Information
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AGICode AT3G22940
Description F-box associated ubiquitination effector family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G22940 F-box associated ubiquitination effector family protein 1 0.34 -0.29
2 AT3G23800 selenium-binding protein 3 selenium-binding protein 3 -0.75 0.32 -0.31
3 AT2G24640 ubiquitin-specific protease 19 ubiquitin-specific protease 19 -0.75 0.3 -0.32
4 AT2G38960 endoplasmic reticulum oxidoreductins 2 endoplasmic reticulum
oxidoreductins 2, endoplasmic
reticulum oxidoreductins 2		 -0.73 0.32 -0.31
5 AT5G39620 RAB GTPase homolog G1 RAB GTPase homolog G1, RAB GTPase
homolog G1		 -0.72 0.3 -0.33
6 AT1G36810 transposable element gene 0.72 0.33 -0.31
7 AT5G61940 Ubiquitin carboxyl-terminal hydrolase-related protein -0.7 0.32 -0.31
8 AT1G46336 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.68 0.31 -0.31
9 AT2G31210 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.68 0.3 -0.29
10 AT5G23750 Remorin family protein 0.67 0.3 -0.32
11 AT5G60090 Protein kinase superfamily protein -0.67 0.29 -0.32
12 AT1G59760 RNA helicase, ATP-dependent, SK12/DOB1 protein AtMTR4, homolog of yeast MTR4 -0.67 0.31 -0.3
13 AT2G04600 transposable element gene -0.67 0.32 -0.31
14 AT1G16370 organic cation/carnitine transporter 6 ARABIDOPSIS THALIANA ORGANIC
CATION/CARNITINE TRANSPORTER 6,
organic cation/carnitine
transporter 6		 -0.67 0.31 -0.32
15 AT5G58050 SHV3-like 4 Glycerophosphodiester
phosphodiesterase (GDPD) like 6,
SHV3-like 4		 -0.67 0.32 -0.32
16 AT5G35820 transposable element gene 0.67 0.32 -0.31
17 AT4G17690 Peroxidase superfamily protein 0.66 0.29 -0.32
18 AT5G65500 U-box domain-containing protein kinase family protein 0.66 0.32 -0.33
19 AT2G13940 transposable element gene -0.66 0.32 -0.33
20 AT3G62310 RNA helicase family protein -0.66 0.32 -0.31
21 AT5G60870 Regulator of chromosome condensation (RCC1) family protein RCC1/UVR8/GEF-like 3 -0.66 0.31 -0.33
22 AT2G15500 RNA-binding protein 0.66 0.31 -0.31
23 AT4G15400 HXXXD-type acyl-transferase family protein -0.66 0.32 -0.29
24 AT3G26125 cytochrome P450, family 86, subfamily C, polypeptide 2 cytochrome P450, family 86,
subfamily C, polypeptide 2		 0.66 0.34 -0.33
25 AT2G46070 mitogen-activated protein kinase 12 ATMPK12, MAPK12, mitogen-activated
protein kinase 12		 0.65 0.33 -0.32
26 AT2G18330 AAA-type ATPase family protein -0.65 0.34 -0.28
27 AT4G30630 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G57910.1); Has 33 Blast hits
to 33 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 33; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.65 0.31 -0.34
28 AT4G37220 Cold acclimation protein WCOR413 family 0.65 0.32 -0.3
29 AT5G36950 DegP protease 10 DegP protease 10 -0.65 0.31 -0.32
30 AT1G17690 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: nucleus; EXPRESSED
IN: 24 plant structures; EXPRESSED DURING: 13 growth
stages; CONTAINS InterPro DOMAIN/s: Digestive organ
expansion factor, predicted (InterPro:IPR010678); Has 25006
Blast hits to 13379 proteins in 904 species: Archae - 102;
Bacteria - 5571; Metazoa - 7448; Fungi - 3168; Plants -
1056; Viruses - 466; Other Eukaryotes - 7195 (source: NCBI
BLink).		 nucleolar factor 1 -0.65 0.29 -0.29
31 AT5G61970 signal recognition particle-related / SRP-related -0.65 0.31 -0.31
32 AT4G20770 Pentatricopeptide repeat (PPR) superfamily protein -0.65 0.32 -0.3
33 AT2G17860 Pathogenesis-related thaumatin superfamily protein -0.65 0.3 -0.32
34 AT2G20770 GCR2-like 2 GCR2-like 2 0.65 0.33 -0.32
35 AT5G23840 MD-2-related lipid recognition domain-containing protein -0.65 0.32 -0.33
36 AT3G29780 ralf-like 27 ralf-like 27 -0.64 0.35 -0.3
37 AT4G33810 Glycosyl hydrolase superfamily protein 0.64 0.3 -0.31
38 AT3G24440 Fibronectin type III domain-containing protein VIN3-LIKE 1, VERNALIZATION 5 -0.64 0.31 -0.31
39 AT4G16780 homeobox protein 2 homeobox protein 2, ARABIDOPSIS
THALIANA HOMEOBOX PROTEIN 2, HAT4,
homeobox protein 2		 0.64 0.34 -0.29
40 AT1G01200 RAB GTPase homolog A3 ARABIDOPSIS RAB GTPASE HOMOLOG A3,
RAB GTPase homolog A3, RAB GTPase
homolog A3		 -0.64 0.32 -0.3
41 AT5G64110 Peroxidase superfamily protein 0.64 0.32 -0.32
42 AT3G21660 UBX domain-containing protein 0.64 0.31 -0.34
43 AT1G49150 unknown protein; Has 6 Blast hits to 6 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.64 0.35 -0.33
44 AT1G70580 alanine-2-oxoglutarate aminotransferase 2 alanine-2-oxoglutarate
aminotransferase 2,
GLUTAMATE:GLYOXYLATE
AMINOTRANSFERASE 2		 0.64 0.32 -0.32
45 AT5G05520 Outer membrane OMP85 family protein -0.63 0.31 -0.29
46 AT2G30840 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.63 0.29 -0.32
47 AT4G18720 Transcription factor IIS protein 0.63 0.31 -0.31
48 AT4G21150 ribophorin II (RPN2) family protein HAPLESS 6 -0.63 0.3 -0.31
49 AT3G09090 defective in exine formation protein (DEX1) DEFECTIVE IN EXINE FORMATION 1 -0.63 0.29 -0.33
50 AT1G63120 RHOMBOID-like 2 RHOMBOID-like 2, RHOMBOID-like 2 0.63 0.3 -0.33
51 AT3G42440 transposable element gene -0.63 0.31 -0.33
52 AT5G26110 Protein kinase superfamily protein -0.63 0.3 -0.33
53 AT5G40940 putative fasciclin-like arabinogalactan protein 20 putative fasciclin-like
arabinogalactan protein 20		 -0.63 0.31 -0.33
54 AT5G37420 Family of unknown function (DUF577) -0.63 0.33 -0.32
55 AT5G53070 Ribosomal protein L9/RNase H1 -0.63 0.33 -0.32
56 AT5G60740 ABC transporter family protein ATP-binding cassette G28 0.63 0.32 -0.31
57 AT1G76710 SET domain group 26 ASH1 RELATED PROTEIN 1,
ASH1-RELATED PROTEIN 1, SET domain
group 26		 -0.63 0.32 -0.34
58 AT1G35380 transposable element gene 0.62 0.29 -0.3
59 AT5G25160 zinc finger protein 3 zinc finger protein 3 -0.62 0.31 -0.33
60 AT5G08305 Pentatricopeptide repeat (PPR) superfamily protein -0.62 0.32 -0.3
61 AT1G07960 PDI-like 5-1 PDI-like 5-1, PDI-like 5-1 -0.62 0.3 -0.33
62 AT1G32450 nitrate transporter 1.5 nitrate transporter 1.5 -0.62 0.31 -0.31
63 AT2G24450 FASCICLIN-like arabinogalactan protein 3 precursor FASCICLIN-like arabinogalactan
protein 3 precursor		 -0.61 0.31 -0.3
64 AT2G14810 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.61 0.33 -0.33
65 AT5G57420 indole-3-acetic acid inducible 33 indole-3-acetic acid inducible 33 -0.61 0.32 -0.3
66 AT5G04630 cytochrome P450, family 77, subfamily A, polypeptide 9 cytochrome P450, family 77,
subfamily A, polypeptide 9		 0.61 0.32 -0.3
67 AT5G02390 Protein of unknown function (DUF3741) DUO1-activated unknown 1 0.61 0.34 -0.32
68 AT1G31850 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.61 0.32 -0.31
69 AT1G61370 S-locus lectin protein kinase family protein -0.61 0.34 -0.33
70 AT5G60520 Late embryogenesis abundant (LEA) protein-related -0.61 0.32 -0.32
71 AT2G44270 repressor of lrx1 repressor of lrx1 -0.61 0.31 -0.33
72 AT3G53820 C2H2 and C2HC zinc fingers superfamily protein -0.61 0.32 -0.32
73 AT1G47660 unknown protein; Has 5165 Blast hits to 2753 proteins in
450 species: Archae - 12; Bacteria - 1193; Metazoa - 731;
Fungi - 361; Plants - 761; Viruses - 176; Other Eukaryotes
- 1931 (source: NCBI BLink).		 -0.61 0.31 -0.33
74 AT5G52770 Copper transport protein family -0.61 0.34 -0.31
75 AT1G47680 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G47700.1); Has 3 Blast
hits to 3 proteins in 1 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 3; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.6 0.33 -0.31
76 AT5G02350 Cysteine/Histidine-rich C1 domain family protein -0.6 0.31 -0.33
77 AT5G23180 BEST Arabidopsis thaliana protein match is: DNA-binding
storekeeper protein-related transcriptional regulator
(TAIR:AT4G01260.1); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.6 0.33 -0.34
78 AT1G64690 branchless trichome BRANCHLESS TRICHOMES 0.6 0.33 -0.31
79 AT3G60760 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.6 0.32 -0.32
80 AT3G44330 INVOLVED IN: protein processing; LOCATED IN: mitochondrion,
endoplasmic reticulum, plasma membrane, vacuole; EXPRESSED
IN: 25 plant structures; EXPRESSED DURING: 13 growth
stages; CONTAINS InterPro DOMAIN/s: Nicalin
(InterPro:IPR016574), EF-Hand 1, calcium-binding site
(InterPro:IPR018247), Nicastrin (InterPro:IPR008710); Has
245 Blast hits to 243 proteins in 99 species: Archae - 6;
Bacteria - 10; Metazoa - 139; Fungi - 0; Plants - 46;
Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).		 -0.6 0.32 -0.32
81 AT3G43420 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.6 0.33 -0.31
82 AT1G47940 Pentatricopeptide repeat (PPR) superfamily protein -0.6 0.31 -0.3
83 AT1G23070 Protein of unknown function (DUF300) 0.6 0.31 -0.31
84 AT3G45670 Protein kinase superfamily protein -0.6 0.29 -0.32
85 AT3G43590 zinc knuckle (CCHC-type) family protein -0.6 0.32 -0.32
86 AT4G13820 Leucine-rich repeat (LRR) family protein -0.6 0.33 -0.31
87 AT1G32850 ubiquitin-specific protease 11 ubiquitin-specific protease 11 -0.6 0.32 -0.33
88 AT3G52460 hydroxyproline-rich glycoprotein family protein -0.6 0.31 -0.28
89 AT1G58210 kinase interacting family protein EMBRYO DEFECTIVE 1674 -0.6 0.33 -0.29
90 AT2G46940 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G62070.1); Has 143 Blast hits
to 141 proteins in 14 species: Archae - 0; Bacteria - 0;
Metazoa - 4; Fungi - 0; Plants - 139; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.6 0.31 -0.31
91 AT5G05290 expansin A2 ATEXP2, expansin A2, ATHEXP ALPHA
1.12, EXPANSIN 2, expansin A2		 -0.59 0.31 -0.32
92 AT1G22890 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 19 plant structures;
EXPRESSED DURING: 11 growth stages; Has 17 Blast hits to 17
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 17; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.59 0.31 -0.31
93 AT4G15320 cellulose synthase-like B6 cellulose synthase-like B6,
CELLULOSE SYNTHASE LIKE B6,
CSLB06, cellulose synthase-like B6		 0.59 0.31 -0.32
94 AT1G34120 inositol polyphosphate 5-phosphatase I AT5P1, MYO-INOSITOL POLYPHOSPHATE
5-PHOSPHATASE 1, ATIP5PI, inositol
polyphosphate 5-phosphatase I		 0.59 0.3 -0.32
95 AT5G38260 Protein kinase superfamily protein -0.59 0.31 -0.3
96 AT1G16830 Pentatricopeptide repeat (PPR) superfamily protein -0.59 0.29 -0.31
97 AT3G02280 Flavodoxin family protein -0.59 0.3 -0.3
98 AT3G18230 Octicosapeptide/Phox/Bem1p family protein -0.59 0.31 -0.34
99 AT2G02830 transposable element gene -0.59 0.3 -0.33
100 AT3G22870 F-box and associated interaction domains-containing protein 0.59 0.31 -0.31
101 AT5G01310 APRATAXIN-like APRATAXIN-like -0.59 0.33 -0.33
102 AT1G23640 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN:
petal, leaf whorl, sepal, flower; EXPRESSED DURING: 4
anthesis, petal differentiation and expansion stage;
CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF220 (InterPro:IPR003863); BEST Arabidopsis thaliana
protein match is: Domain of unknown function DUF220
(TAIR:AT1G23660.1); Has 270 Blast hits to 130 proteins in
12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 270; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.59 0.3 -0.31
103 AT4G19000 Transcription elongation factor (TFIIS) family protein ARABIDOPSIS THALIANA IWS2 (FROM
YEAST INTERACTS WITH SPT6), IWS2		 -0.59 0.33 -0.3
104 AT1G64290 F-box protein-related 0.58 0.3 -0.31
105 AT5G48200 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.58 0.31 -0.3
106 AT5G11820 Plant self-incompatibility protein S1 family 0.58 0.31 -0.34
107 AT4G15030 CONTAINS InterPro DOMAIN/s: Folate-sensitive fragile site
protein Fra10Ac1 (InterPro:IPR019129); Has 8455 Blast hits
to 5700 proteins in 376 species: Archae - 6; Bacteria -
264; Metazoa - 3820; Fungi - 744; Plants - 645; Viruses -
76; Other Eukaryotes - 2900 (source: NCBI BLink).		 0.58 0.31 -0.32
108 AT1G41797 transposable element gene 0.58 0.3 -0.29
109 AT5G52690 Copper transport protein family 0.57 0.3 -0.32
110 AT4G00630 K+ efflux antiporter 2 ATKEA2, K+ efflux antiporter 2 0.57 0.32 -0.3
111 AT5G34460 transposable element gene 0.57 0.31 -0.3
112 AT3G61840 Protein of unknown function (DUF688) 0.57 0.33 -0.32
113 AT5G51900 Cytochrome P450 family protein 0.57 0.3 -0.29
114 AT4G16820 alpha/beta-Hydrolases superfamily protein phospholipase A I beta 2 0.56 0.31 -0.31
115 AT3G51770 tetratricopeptide repeat (TPR)-containing protein ARABIDOPSIS ETHYLENE OVERPRODUCER
1, ETHYLENE OVERPRODUCER 1		 0.56 0.33 -0.31
116 AT5G06020 Plant self-incompatibility protein S1 family 0.56 0.3 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
117 C0145 Maltotetraose - Maltotetraose starch degradation II -0.67 0.44 -0.44 C0145
118 C0221 Quercetin-3-(2''-O-α-rhamnosyl)-O-β-glucosyl-7-O-α-rhamnoside Quercetin-3-(2''-O-α-L-rhamnosyl)-O-β-D-glucosyl-7-O-α-L-rhamnoside - quercetin glucoside biosynthesis (Arabidopsis) -0.62 0.47 -0.46
119 C0108 GMP - GMP guanine and guanosine salvage II,
guanosine nucleotides degradation I,
guanosine nucleotides degradation II,
guanine and guanosine salvage III,
purine nucleotides de novo biosynthesis II,
purine nucleotide metabolism (phosphotransfer and nucleotide modification) 		0.57 0.48 -0.46 C0108