AT3G24070 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT3G24070
Description Zinc knuckle (CCHC-type) family protein
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G24070 Zinc knuckle (CCHC-type) family protein 1 0.32 -0.32
2 AT5G66110 Heavy metal transport/detoxification superfamily protein heavy metal associated
isoprenylated plant protein 27		 0.73 0.31 -0.3
3 AT3G12100 Cation efflux family protein 0.72 0.33 -0.32
4 AT2G43390 unknown protein; Has 7 Blast hits to 7 proteins in 3
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.69 0.31 -0.32
5 AT5G05550 sequence-specific DNA binding transcription factors 0.68 0.32 -0.29
6 AT1G79830 golgin candidate 5 golgin candidate 5 0.67 0.31 -0.32
7 AT2G42620 RNI-like superfamily protein MORE AXILLARY BRANCHES 2, ORESARA
9, PLEIOTROPIC PHOTOSIGNALING		 0.66 0.3 -0.34
8 AT2G27900 CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF2451, C-terminal (InterPro:IPR019514), Vacuolar protein
sorting-associated protein 54 (InterPro:IPR019515); Has 316
Blast hits to 252 proteins in 92 species: Archae - 0;
Bacteria - 2; Metazoa - 200; Fungi - 2; Plants - 68;
Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).		 0.66 0.32 -0.34
9 AT1G23210 glycosyl hydrolase 9B6 glycosyl hydrolase 9B6, glycosyl
hydrolase 9B6		 -0.66 0.3 -0.32
10 AT5G12420 O-acyltransferase (WSD1-like) family protein -0.65 0.32 -0.31
11 AT4G38020 tRNA/rRNA methyltransferase (SpoU) family protein 0.65 0.33 -0.3
12 AT1G50430 Ergosterol biosynthesis ERG4/ERG24 family DELTA5,7-STEROL DELTA7 REDUCTASE,
DWARF 5, LEPIDA, PARVA, STEROL
DELTA7 REDUCTASE		 -0.65 0.34 -0.31
13 AT4G11640 serine racemase serine racemase, serine racemase 0.65 0.33 -0.32
14 AT5G61050 histone deacetylase-related / HD-related 0.64 0.31 -0.32
15 AT5G66030 Golgi-localized GRIP domain-containing protein ATGRIP, GRIP 0.64 0.3 -0.32
16 AT1G64170 cation/H+ exchanger 16 cation/H+ exchanger 16, cation/H+
exchanger 16		 -0.64 0.3 -0.32
17 AT1G72190 D-isomer specific 2-hydroxyacid dehydrogenase family
protein		 0.64 0.3 -0.31
18 AT1G13450 Homeodomain-like superfamily protein GT-1 0.64 0.31 -0.32
19 AT5G56540 arabinogalactan protein 14 arabinogalactan protein 14,
ATAGP14		 -0.64 0.32 -0.32
20 AT5G60660 plasma membrane intrinsic protein 2;4 plasma membrane intrinsic protein
2;4, PIP2F		 -0.63 0.33 -0.31
21 AT1G55510 branched-chain alpha-keto acid decarboxylase E1 beta
subunit		 branched-chain alpha-keto acid
decarboxylase E1 beta subunit		 0.63 0.31 -0.32
22 AT2G23740 nucleic acid binding;sequence-specific DNA binding
transcription factors;zinc ion binding		 0.63 0.31 -0.29
23 AT3G28970 Domain of unknown function (DUF298) antiauxin-resistant 3 0.63 0.32 -0.29
24 AT3G18200 nodulin MtN21 /EamA-like transporter family protein -0.63 0.33 -0.31
25 AT2G14850 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G33890.2); Has 140 Blast hits
to 132 proteins in 17 species: Archae - 0; Bacteria - 0;
Metazoa - 1; Fungi - 2; Plants - 133; Viruses - 0; Other
Eukaryotes - 4 (source: NCBI BLink).		 0.63 0.32 -0.31
26 AT1G04200 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Dymeclin (InterPro:IPR019142); Has 395
Blast hits to 389 proteins in 117 species: Archae - 0;
Bacteria - 0; Metazoa - 262; Fungi - 21; Plants - 68;
Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).		 -0.62 0.32 -0.3
27 AT2G01220 Nucleotidylyl transferase superfamily protein 0.62 0.32 -0.3
28 AT5G16810 Protein kinase superfamily protein 0.62 0.31 -0.32
29 AT4G38180 FAR1-related sequence 5 FAR1-related sequence 5 0.61 0.31 -0.33
30 AT5G44750 DNA-directed DNA polymerases ARABIDOPSIS THALIANA HOMOLOG OF
REVERSIONLESS 1, REV1		 0.61 0.31 -0.31
31 AT4G33310 unknown protein; Has 5 Blast hits to 5 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.61 0.32 -0.32
32 AT1G04130 Tetratricopeptide repeat (TPR)-like superfamily protein AtTPR2, tetratricopeptide repeat 2 -0.61 0.31 -0.31
33 AT1G60220 UB-like protease 1D OVERLY TOLERANT TO SALT 1, UB-like
protease 1D		 0.61 0.32 -0.3
34 AT5G13050 5-formyltetrahydrofolate cycloligase 5-formyltetrahydrofolate
cycloligase		 0.61 0.3 -0.32
35 AT1G32360 Zinc finger (CCCH-type) family protein 0.61 0.32 -0.34
36 AT5G64280 dicarboxylate transporter 2.2 dicarboxylate transporter 2.2 0.61 0.31 -0.3
37 AT4G17720 RNA-binding (RRM/RBD/RNP motifs) family protein -0.61 0.3 -0.3
38 AT1G03520 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 0.61 0.31 -0.32
39 AT1G04950 TATA BOX ASSOCIATED FACTOR II 59 ATTAF6, EMBRYO DEFECTIVE 2781,
TBP-associated factor 6, TATA BOX
ASSOCIATED FACTOR II 59		 0.61 0.31 -0.32
40 AT5G57240 OSBP(oxysterol binding protein)-related protein 4C OSBP(oxysterol binding
protein)-related protein 4C		 0.61 0.31 -0.29
41 AT5G15540 PHD finger family protein ARABIDOPSIS THALIANA
SISTER-CHROMATID COHESION 2,
EMBRYO DEFECTIVE 2773,
SISTER-CHROMATID COHESION 2		 0.6 0.3 -0.3
42 AT4G20230 Terpenoid cyclases/Protein prenyltransferases superfamily
protein		 -0.6 0.32 -0.3
43 AT1G76940 RNA-binding (RRM/RBD/RNP motifs) family protein 0.6 0.3 -0.3
44 AT5G22500 fatty acid reductase 1 fatty acid reductase 1 0.6 0.31 -0.31
45 AT3G25110 fatA acyl-ACP thioesterase fatA acyl-ACP thioesterase, fatA
acyl-ACP thioesterase		 -0.6 0.33 -0.36
46 AT1G73960 TBP-associated factor 2 TBP-associated factor 2 0.6 0.32 -0.31
47 AT1G09530 phytochrome interacting factor 3 PHYTOCHROME-ASSOCIATED PROTEIN 3,
phytochrome interacting factor 3,
PHOTOCURRENT 1		 0.6 0.32 -0.32
48 AT4G34030 3-methylcrotonyl-CoA carboxylase 3-methylcrotonyl-CoA carboxylase 0.59 0.34 -0.31
49 AT5G10710 INVOLVED IN: chromosome segregation, cell division; LOCATED
IN: chromosome, centromeric region, nucleus; EXPRESSED IN:
23 plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: Centromere protein Cenp-O
(InterPro:IPR018464); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.59 0.32 -0.31
50 AT3G56720 unknown protein; Has 6239 Blast hits to 4635 proteins in
365 species: Archae - 6; Bacteria - 230; Metazoa - 3389;
Fungi - 659; Plants - 656; Viruses - 13; Other Eukaryotes -
1286 (source: NCBI BLink).		 0.59 0.3 -0.31
51 AT2G26070 Protein of unknown function (DUF778) REVERSION-TO-ETHYLENE SENSITIVITY1 0.59 0.32 -0.29
52 AT4G13440 Calcium-binding EF-hand family protein -0.59 0.31 -0.29
53 AT1G23160 Auxin-responsive GH3 family protein -0.59 0.31 -0.32
54 AT4G35720 Arabidopsis protein of unknown function (DUF241) 0.59 0.32 -0.33
55 AT2G30070 potassium transporter 1 potassium transporter 1, ATKT1P,
ATKUP1, potassium transporter 1,
POTASSIUM UPTAKE TRANSPORTER 1		 0.59 0.31 -0.29
56 AT4G03140 NAD(P)-binding Rossmann-fold superfamily protein 0.59 0.33 -0.31
57 AT5G66815 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: root; Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.59 0.3 -0.31
58 AT3G52340 sucrose-6F-phosphate phosphohydrolase 2 SUCROSE-PHOSPHATASE 2,
sucrose-6F-phosphate
phosphohydrolase 2		 0.58 0.3 -0.31
59 AT1G14960 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 -0.58 0.32 -0.32
60 AT1G32300 D-arabinono-1,4-lactone oxidase family protein -0.58 0.37 -0.31
61 AT3G10460 Plant self-incompatibility protein S1 family -0.58 0.3 -0.32
62 AT1G09520 LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 12 growth stages; CONTAINS InterPro
DOMAIN/s: Zinc finger, PHD-type, conserved site
(InterPro:IPR019786); BEST Arabidopsis thaliana protein
match is: PHD finger family protein (TAIR:AT3G17460.1); Has
56 Blast hits to 56 proteins in 17 species: Archae - 0;
Bacteria - 2; Metazoa - 0; Fungi - 4; Plants - 46; Viruses
- 0; Other Eukaryotes - 4 (source: NCBI BLink).		 0.58 0.33 -0.31
63 AT5G49700 Predicted AT-hook DNA-binding family protein 0.58 0.33 -0.33
64 AT3G08490 BEST Arabidopsis thaliana protein match is: Late
embryogenesis abundant protein, group 2 (TAIR:AT3G24600.1);
Has 161 Blast hits to 158 proteins in 15 species: Archae -
0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 161;
Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.58 0.33 -0.32
65 AT4G04590 transposable element gene 0.57 0.31 -0.31
66 AT5G03510 C2H2-type zinc finger family protein -0.57 0.34 -0.32
67 AT3G23090 TPX2 (targeting protein for Xklp2) protein family -0.57 0.31 -0.32
68 AT3G61600 POZ/BTB containin G-protein 1 POZ/BTB containin G-protein 1,
POZ/BTB containin G-protein 1		 0.57 0.33 -0.32
69 AT3G50500 SNF1-related protein kinase 2.2 SNF1-RELATED PROTEIN KINASE 2-2,
SNF1-related protein kinase 2.2,
SNF1-RELATED PROTEIN KINASE 2-2,
SRK2D		 0.57 0.3 -0.33
70 AT4G02670 indeterminate(ID)-domain 12 indeterminate(ID)-domain 12,
indeterminate(ID)-domain 12		 0.57 0.31 -0.32
71 AT5G25490 Ran BP2/NZF zinc finger-like superfamily protein 0.57 0.3 -0.32
72 AT5G43310 COP1-interacting protein-related 0.57 0.32 -0.3
73 AT5G11540 D-arabinono-1,4-lactone oxidase family protein -0.56 0.32 -0.32
74 AT1G73160 UDP-Glycosyltransferase superfamily protein -0.56 0.31 -0.31
75 AT1G64130 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 0.56 0.31 -0.34
76 AT5G56480 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.56 0.32 -0.31
77 AT5G44550 Uncharacterised protein family (UPF0497) -0.56 0.31 -0.31
78 AT5G19930 Protein of unknown function DUF92, transmembrane -0.56 0.31 -0.33
79 AT3G61880 cytochrome p450 78a9 cytochrome p450 78a9 -0.56 0.32 -0.31
80 AT1G33670 Leucine-rich repeat (LRR) family protein -0.56 0.3 -0.31
81 AT3G06380 tubby-like protein 9 tubby-like protein 9, tubby-like
protein 9		 0.55 0.32 -0.31
82 AT3G44950 glycine-rich protein 0.55 0.31 -0.32
83 AT4G36610 alpha/beta-Hydrolases superfamily protein -0.55 0.32 -0.3
84 AT2G24530 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G31440.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.55 0.32 -0.32
85 AT4G31030 Putative membrane lipoprotein 0.55 0.32 -0.31
86 AT5G36140 cytochrome P450, family 716, subfamily A, polypeptide 2 cytochrome P450, family 716,
subfamily A, polypeptide 2		 -0.55 0.32 -0.29
87 AT1G63150 Tetratricopeptide repeat (TPR)-like superfamily protein 0.55 0.32 -0.3
88 AT1G73820 Ssu72-like family protein 0.55 0.3 -0.33
89 AT4G01630 expansin A17 EXPANSIN 17, expansin A17, ATHEXP
ALPHA 1.13, expansin A17		 -0.55 0.32 -0.31
90 AT1G54070 Dormancy/auxin associated family protein 0.54 0.31 -0.33
91 AT5G40550 SGF29 tudor-like domain AtSGF29b, SaGa associated Factor
29 b		 0.54 0.3 -0.3
92 AT5G01560 lectin receptor kinase a4.3 lectin receptor kinase a4.3 -0.54 0.32 -0.31
93 AT5G05710 Pleckstrin homology (PH) domain superfamily protein 0.54 0.33 -0.33
94 AT4G35987 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.54 0.32 -0.33
95 AT3G13190 Plant protein of unknown function (DUF827) 0.54 0.32 -0.31
96 AT1G73780 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.53 0.32 -0.33
97 AT3G04370 plasmodesmata-located protein 4 plasmodesmata-located protein 4 -0.53 0.33 -0.27
98 AT3G20130 cytochrome P450, family 705, subfamily A, polypeptide 22 cytochrome P450, family 705,
subfamily A, polypeptide 22,
gravity persistence signal 1		 -0.53 0.34 -0.31
99 AT3G43020 transposable element gene -0.53 0.31 -0.33
100 AT4G23330 BEST Arabidopsis thaliana protein match is: eukaryotic
translation initiation factor 3A (TAIR:AT4G11420.1); Has 63
Blast hits to 55 proteins in 14 species: Archae - 0;
Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 62; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.53 0.29 -0.33
101 AT3G28380 P-glycoprotein 17 ATP-binding cassette B17,
P-glycoprotein 17		 -0.52 0.32 -0.31
102 AT2G43670 Carbohydrate-binding X8 domain superfamily protein -0.52 0.31 -0.32
103 AT1G18140 laccase 1 ATLAC1, laccase 1 -0.52 0.3 -0.31
104 AT4G18510 CLAVATA3/ESR-related 2 CLAVATA3/ESR-related 2 -0.52 0.3 -0.35
105 AT3G24810 Cyclin-dependent kinase inhibitor family protein ICK3, kip-related protein 5 -0.52 0.33 -0.3
106 AT5G26930 GATA transcription factor 23 GATA transcription factor 23 -0.51 0.32 -0.32
107 AT3G22930 calmodulin-like 11 calmodulin-like 11 -0.51 0.32 -0.3
108 AT3G59370 Vacuolar calcium-binding protein-related -0.51 0.31 -0.32
109 AT1G22210 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 trehalose-6-phosphate phosphatase
C		 -0.51 0.3 -0.33
110 AT1G55030 RNI-like superfamily protein -0.51 0.3 -0.3
111 AT4G11190 Disease resistance-responsive (dirigent-like protein)
family protein		 -0.51 0.31 -0.29
112 AT1G78700 BES1/BZR1 homolog 4 BES1/BZR1 homolog 4 -0.51 0.32 -0.32
113 AT5G18250 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT3G04040.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.51 0.31 -0.3
114 AT5G15180 Peroxidase superfamily protein -0.51 0.3 -0.31