AGICode | AT3G24010 |
Description | RING/FYVE/PHD zinc finger superfamily protein |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT3G24010 | RING/FYVE/PHD zinc finger superfamily protein | ARABIDOPSIS THALIANA INHIBITOR OF GROWTH 1, INHIBITOR OF GROWTH 1 |
1 | 0.36 | -0.32 | ||
2 | AT3G11620 | alpha/beta-Hydrolases superfamily protein | 0.75 | 0.31 | -0.32 | |||
3 | AT5G52880 | F-box family protein | 0.72 | 0.3 | -0.33 | |||
4 | AT4G02120 | CTP synthase family protein | 0.68 | 0.33 | -0.32 | |||
5 | AT5G02820 | Spo11/DNA topoisomerase VI, subunit A protein | BRASSINOSTEROID INSENSITIVE 5, ROOT HAIRLESS 2 |
-0.68 | 0.33 | -0.33 | ||
6 | AT3G16230 | Predicted eukaryotic LigT | 0.67 | 0.31 | -0.33 | |||
7 | AT4G24630 | DHHC-type zinc finger family protein | 0.66 | 0.3 | -0.34 | |||
8 | AT2G32070 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein |
-0.66 | 0.31 | -0.31 | |||
9 | AT1G20300 | Pentatricopeptide repeat (PPR) superfamily protein | -0.66 | 0.3 | -0.31 | |||
10 | AT2G21390 | Coatomer, alpha subunit | -0.64 | 0.32 | -0.3 | |||
11 | AT3G29390 | RS2-interacting KH protein | RS2-interacting KH protein | 0.64 | 0.31 | -0.34 | ||
12 | AT3G23130 | C2H2 and C2HC zinc fingers superfamily protein | FLORAL DEFECTIVE 10, FLORAL ORGAN NUMBER 1, SUPERMAN |
0.64 | 0.31 | -0.3 | ||
13 | AT2G43770 | Transducin/WD40 repeat-like superfamily protein | -0.64 | 0.33 | -0.32 | |||
14 | AT1G78200 | Protein phosphatase 2C family protein | 0.64 | 0.32 | -0.32 | |||
15 | AT3G15220 | Protein kinase superfamily protein | 0.64 | 0.3 | -0.32 | |||
16 | AT3G30843 | transposable element gene | -0.64 | 0.33 | -0.29 | |||
17 | AT2G39120 | Ubiquitin carboxyl-terminal hydrolase family protein | what's this factor 9 | -0.64 | 0.29 | -0.3 | ||
18 | AT4G34480 | O-Glycosyl hydrolases family 17 protein | 0.63 | 0.3 | -0.31 | |||
19 | AT5G27710 | unknown protein; Has 49 Blast hits to 49 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). |
0.63 | 0.32 | -0.31 | |||
20 | AT3G27550 | RNA-binding CRS1 / YhbY (CRM) domain protein | -0.63 | 0.34 | -0.32 | |||
21 | AT5G15010 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.63 | 0.32 | -0.3 | |||
22 | AT5G58200 | Calcineurin-like metallo-phosphoesterase superfamily protein |
0.63 | 0.33 | -0.32 | |||
23 | AT2G10070 | transposable element gene | -0.63 | 0.3 | -0.32 | |||
24 | AT4G02430 | RNA-binding (RRM/RBD/RNP motifs) family protein | Serine/Arginine-Rich Protein Splicing Factor 34b, Serine/Arginine-Rich Protein Splicing Factor 34b |
0.63 | 0.32 | -0.31 | ||
25 | AT3G48120 | unknown protein; Has 22990 Blast hits to 12942 proteins in 666 species: Archae - 8; Bacteria - 739; Metazoa - 13803; Fungi - 2465; Plants - 1363; Viruses - 116; Other Eukaryotes - 4496 (source: NCBI BLink). |
0.62 | 0.31 | -0.33 | |||
26 | AT5G25500 | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.62 | 0.31 | -0.33 | |||
27 | AT1G61640 | Protein kinase superfamily protein | -0.62 | 0.31 | -0.31 | |||
28 | AT1G22720 | Protein kinase superfamily protein | 0.61 | 0.33 | -0.31 | |||
29 | AT1G60620 | RNA polymerase I subunit 43 | RNA polymerase I subunit 43, RNA polymerase I subunit 43 |
-0.61 | 0.32 | -0.32 | ||
30 | AT3G53520 | UDP-glucuronic acid decarboxylase 1 | ATUXS1, UDP-glucuronic acid decarboxylase 1 |
-0.61 | 0.31 | -0.31 | ||
31 | AT3G53570 | FUS3-complementing gene 1 | FUS3-complementing gene 1, AME2, FUS3-complementing gene 1 |
0.61 | 0.3 | -0.33 | ||
32 | AT3G59440 | Calcium-binding EF-hand family protein | -0.61 | 0.32 | -0.31 | |||
33 | AT2G15930 | unknown protein; Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.61 | 0.33 | -0.34 | |||
34 | AT4G15750 | Plant invertase/pectin methylesterase inhibitor superfamily protein |
0.61 | 0.32 | -0.3 | |||
35 | AT2G01610 | Plant invertase/pectin methylesterase inhibitor superfamily protein |
0.61 | 0.32 | -0.32 | |||
36 | AT4G01510 | Arv1-like protein | ARV2 | 0.61 | 0.3 | -0.33 | ||
37 | AT1G29820 | Magnesium transporter CorA-like family protein | -0.6 | 0.32 | -0.31 | |||
38 | AT5G36150 | putative pentacyclic triterpene synthase 3 | putative pentacyclic triterpene synthase 3, putative pentacyclic triterpene synthase 3 |
-0.6 | 0.35 | -0.28 | ||
39 | AT3G30220 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G43150.1); Has 30 Blast hits to 30 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.6 | 0.3 | -0.31 | |||
40 | AT3G25210 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.6 | 0.33 | -0.31 | |||
41 | AT3G22670 | Pentatricopeptide repeat (PPR) superfamily protein | -0.6 | 0.31 | -0.32 | |||
42 | AT5G46920 | Intron maturase, type II family protein | -0.6 | 0.32 | -0.3 | |||
43 | AT2G15510 | transposable element gene | -0.6 | 0.31 | -0.31 | |||
44 | AT2G46860 | pyrophosphorylase 3 | pyrophosphorylase 3, pyrophosphorylase 3 |
-0.6 | 0.32 | -0.31 | ||
45 | AT1G21430 | Flavin-binding monooxygenase family protein | YUC11 | 0.59 | 0.33 | -0.34 | ||
46 | AT1G21550 | Calcium-binding EF-hand family protein | 0.59 | 0.34 | -0.31 | |||
47 | AT1G16460 | rhodanese homologue 2 | ARABIDOPSIS THALIANA MERCAPTOPYRUVATE SULFURTRANSFERASE 2, rhodanese homologue 2, MERCAPTOPYRUVATE SULFURTRANSFERASE 2, rhodanese homologue 2, SULFURTRANSFERASE 2, SULFURTRANSFERASE 2 |
0.59 | 0.34 | -0.32 | ||
48 | AT2G36560 | AT hook motif DNA-binding family protein | -0.59 | 0.29 | -0.3 | |||
49 | AT3G44630 | Disease resistance protein (TIR-NBS-LRR class) family | 0.59 | 0.34 | -0.31 | |||
50 | AT1G22730 | MA3 domain-containing protein | -0.59 | 0.34 | -0.31 | |||
51 | AT3G16280 | Integrase-type DNA-binding superfamily protein | 0.59 | 0.31 | -0.32 | |||
52 | AT3G16700 | Fumarylacetoacetate (FAA) hydrolase family | 0.59 | 0.3 | -0.31 | |||
53 | AT1G10920 | NB-ARC domain-containing disease resistance protein | LOV1 | 0.59 | 0.3 | -0.32 | ||
54 | AT1G80680 | SUPPRESSOR OF AUXIN RESISTANCE 3 | MODIFIER OF SNC1,3, NUP96, PRECOCIOUS, SUPPRESSOR OF AUXIN RESISTANCE 3 |
-0.59 | 0.33 | -0.3 | ||
55 | AT2G35030 | Pentatricopeptide repeat (PPR) superfamily protein | -0.59 | 0.31 | -0.32 | |||
56 | AT3G03360 | F-box/RNI-like superfamily protein | 0.59 | 0.31 | -0.33 | |||
57 | AT2G29250 | Concanavalin A-like lectin protein kinase family protein | 0.59 | 0.33 | -0.32 | |||
58 | AT3G61010 | Ferritin/ribonucleotide reductase-like family protein | 0.59 | 0.33 | -0.31 | |||
59 | AT5G10840 | Endomembrane protein 70 protein family | -0.59 | 0.32 | -0.32 | |||
60 | AT4G24270 | EMBRYO DEFECTIVE 140 | EMBRYO DEFECTIVE 140 | -0.59 | 0.32 | -0.32 | ||
61 | AT2G43890 | Pectin lyase-like superfamily protein | -0.59 | 0.32 | -0.32 | |||
62 | AT1G33250 | Protein of unknown function (DUF604) | -0.59 | 0.3 | -0.29 | |||
63 | AT2G20370 | Exostosin family protein | AtMUR3, KATAMARI 1, MURUS 3 | -0.59 | 0.32 | -0.33 | ||
64 | AT5G49500 | Signal recognition particle, SRP54 subunit protein | 0.58 | 0.28 | -0.35 | |||
65 | AT2G18060 | vascular related NAC-domain protein 1 | Arabidopsis NAC domain containing protein 37, vascular related NAC-domain protein 1 |
-0.58 | 0.32 | -0.31 | ||
66 | AT2G22310 | ubiquitin-specific protease 4 | ubiquitin-specific protease 4, ubiquitin-specific protease 4 |
0.58 | 0.3 | -0.32 | ||
67 | AT1G11900 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.58 | 0.31 | -0.31 | |||
68 | AT1G04610 | YUCCA 3 | YUCCA 3 | -0.58 | 0.31 | -0.32 | ||
69 | AT5G37140 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
-0.58 | 0.33 | -0.33 | |||
70 | AT3G14470 | NB-ARC domain-containing disease resistance protein | 0.58 | 0.33 | -0.33 | |||
71 | AT1G19040 | NAC (No Apical Meristem) domain transcriptional regulator superfamily protein |
-0.58 | 0.33 | -0.33 | |||
72 | AT1G09570 | phytochrome A | FAR RED ELONGATED HYPOCOTYL 2, FAR RED ELONGATED 1, ELONGATED HYPOCOTYL 8, phytochrome A |
-0.58 | 0.33 | -0.32 | ||
73 | AT2G16920 | ubiquitin-conjugating enzyme 23 | PHO2 FAMILY UBIQUITIN CONJUGATION ENZYME 2, ubiquitin-conjugating enzyme 23 |
-0.58 | 0.33 | -0.34 | ||
74 | AT4G35130 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.58 | 0.33 | -0.3 | |||
75 | AT5G13020 | Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein |
AtEML3, EMSY-like 3 | 0.57 | 0.32 | -0.31 | ||
76 | AT1G63740 | Disease resistance protein (TIR-NBS-LRR class) family | 0.57 | 0.3 | -0.32 | |||
77 | AT1G64910 | UDP-Glycosyltransferase superfamily protein | -0.57 | 0.31 | -0.31 | |||
78 | AT1G41900 | transposable element gene | 0.57 | 0.32 | -0.3 | |||
79 | AT2G42330 | GC-rich sequence DNA-binding factor-like protein with Tuftelin interacting domain |
0.57 | 0.34 | -0.31 | |||
80 | AT2G04560 | transferases, transferring glycosyl groups | AtLpxB, lipid X B | 0.57 | 0.3 | -0.32 | ||
81 | AT4G22620 | SAUR-like auxin-responsive protein family | -0.57 | 0.31 | -0.32 | |||
82 | AT2G41810 | Protein of unknown function, DUF642 | -0.57 | 0.31 | -0.33 | |||
83 | AT5G19330 | ARM repeat protein interacting with ABF2 | ARM repeat protein interacting with ABF2 |
0.57 | 0.32 | -0.33 | ||
84 | AT5G24150 | FAD/NAD(P)-binding oxidoreductase family protein | SQUALENE MONOOXYGENASE 5, SQP1 | 0.57 | 0.3 | -0.31 | ||
85 | AT4G38890 | FMN-linked oxidoreductases superfamily protein | -0.57 | 0.33 | -0.31 | |||
86 | AT5G65800 | ACC synthase 5 | ACC synthase 5, ATACS5, CYTOKININ-INSENSITIVE 5, ETHYLENE OVERPRODUCER 2 |
-0.57 | 0.3 | -0.32 | ||
87 | AT4G28850 | xyloglucan endotransglucosylase/hydrolase 26 | ATXTH26, xyloglucan endotransglucosylase/hydrolase 26 |
-0.56 | 0.3 | -0.3 | ||
88 | AT1G47920 | RNI-like superfamily protein | -0.56 | 0.3 | -0.31 | |||
89 | AT3G16090 | RING/U-box superfamily protein | homolog of yeast Hrd1, homolog of yeast Hrd1 |
0.56 | 0.31 | -0.34 | ||
90 | AT2G05820 | transposable element gene | 0.56 | 0.33 | -0.31 | |||
91 | AT3G05420 | acyl-CoA binding protein 4 | acyl-CoA binding protein 4 | -0.56 | 0.33 | -0.31 | ||
92 | AT4G14590 | embryo defective 2739 | embryo defective 2739 | -0.56 | 0.32 | -0.33 | ||
93 | AT5G02680 | LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: methionine--tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS, putative (TAIR:AT4G13780.1); Has 252 Blast hits to 252 proteins in 89 species: Archae - 0; Bacteria - 71; Metazoa - 93; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). |
0.56 | 0.32 | -0.31 | |||
94 | AT2G26410 | IQ-domain 4 | IQ-domain 4 | -0.56 | 0.32 | -0.33 | ||
95 | AT2G39180 | CRINKLY4 related 2 | ATCRR2, CRINKLY4 related 2 | -0.56 | 0.3 | -0.29 | ||
96 | AT1G68700 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G26140.1); Has 14 Blast hits to 14 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 14; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.55 | 0.31 | -0.31 | |||
97 | AT4G19680 | iron regulated transporter 2 | IRON REGULATED TRANSPORTER 2, iron regulated transporter 2 |
-0.55 | 0.33 | -0.32 | ||
98 | AT3G10710 | root hair specific 12 | root hair specific 12 | -0.55 | 0.31 | -0.32 | ||
99 | AT3G58520 | Ubiquitin carboxyl-terminal hydrolase family protein | -0.55 | 0.31 | -0.33 | |||
100 | AT2G06310 | transposable element gene | 0.55 | 0.34 | -0.31 | |||
101 | AT5G16850 | telomerase reverse transcriptase | telomerase reverse transcriptase, telomerase reverse transcriptase |
0.55 | 0.31 | -0.31 | ||
102 | AT1G62530 | Plant protein of unknown function (DUF863) | -0.55 | 0.33 | -0.32 | |||
103 | AT3G15200 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.55 | 0.31 | -0.32 | |||
104 | AT2G41930 | Protein kinase superfamily protein | -0.55 | 0.3 | -0.31 | |||
105 | AT5G46150 | LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein |
0.54 | 0.3 | -0.32 | |||
106 | AT2G02350 | SKP1 interacting partner 3 | Phloem protein 2-B9, SKP1 interacting partner 3 |
0.54 | 0.31 | -0.3 | ||
107 | AT4G08160 | glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein |
0.54 | 0.32 | -0.34 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
108 | C0121 | Isoheptylglucosinolate | - | - | - | -0.73 | 0.45 | -0.47 | ||
109 | C0199 | Phosphatidylethanolamine-36:6 | - | Phosphatidylethanolamine-36:6 | phospholipid biosynthesis II, linoleate biosynthesis I, phosphatidylethanolamine biosynthesis I, phosphatidylethanolamine biosynthesis II, glutathione redox reactions I |
-0.7 | 0.49 | -0.47 | ||
110 | C0126 | Isorhamnetin-dirhamnoside | - | - | - | -0.65 | 0.44 | -0.45 | ||
111 | C0127 | Isorhamnetin-hexosyl-rhamnoside | - | - | - | -0.63 | 0.43 | -0.47 |