AT3G23830 : AtGRP4
Query Information
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AGICode AT3G23830
Description glycine-rich RNA-binding protein 4
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G23830 glycine-rich RNA-binding protein 4 AtGRP4, GR-RBP4, glycine-rich
RNA-binding protein 4		 1 0.32 -0.31
2 AT5G08180 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.87 0.31 -0.31
3 AT3G27280 prohibitin 4 prohibitin 4, prohibitin 4 0.86 0.33 -0.31
4 AT3G05060 NOP56-like pre RNA processing ribonucleoprotein 0.86 0.31 -0.31
5 AT4G25630 fibrillarin 2 ATFIB2, fibrillarin 2 0.86 0.31 -0.32
6 AT1G07830 ribosomal protein L29 family protein 0.85 0.31 -0.31
7 AT2G20490 nucleolar RNA-binding Nop10p family protein EMBRYO SAC DEVELOPMENT ARREST 27,
NOP10		 0.85 0.3 -0.32
8 AT1G72730 DEA(D/H)-box RNA helicase family protein 0.85 0.31 -0.33
9 AT5G62440 Protein of unknown function (DUF3223) 0.85 0.32 -0.31
10 AT5G56500 TCP-1/cpn60 chaperonin family protein chaperonin-60beta3 0.84 0.31 -0.3
11 AT4G30930 Ribosomal protein L21 NUCLEAR FUSION DEFECTIVE 1 0.84 0.33 -0.33
12 AT2G35605 SWIB/MDM2 domain superfamily protein 0.84 0.29 -0.32
13 AT5G14520 pescadillo-related 0.84 0.32 -0.32
14 AT3G56900 Transducin/WD40 repeat-like superfamily protein 0.83 0.34 -0.31
15 AT3G03920 H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein 0.83 0.31 -0.31
16 AT1G23410 Ribosomal protein S27a / Ubiquitin family protein 0.83 0.32 -0.29
17 AT3G44750 histone deacetylase 3 ATHD2A, HISTONE DEACETYLASE 2A,
histone deacetylase 3, HDT1		 0.83 0.31 -0.32
18 AT5G22650 histone deacetylase 2B ARABIDOPSIS HISTONE DEACETYLASE 2,
ATHD2B, HISTONE DEACETYLASE 2,
histone deacetylase 2B, HDA4,
HDT02, HDT2		 0.83 0.32 -0.33
19 AT4G34555 Ribosomal protein S25 family protein 0.82 0.32 -0.32
20 AT2G35490 Plastid-lipid associated protein PAP / fibrillin family
protein		 -0.82 0.31 -0.31
21 AT1G80270 PENTATRICOPEPTIDE REPEAT 596 PENTATRICOPEPTIDE REPEAT 596 0.82 0.31 -0.33
22 AT3G26380 Melibiase family protein -0.82 0.31 -0.32
23 AT2G36290 alpha/beta-Hydrolases superfamily protein 0.81 0.29 -0.33
24 AT4G30800 Nucleic acid-binding, OB-fold-like protein 0.81 0.32 -0.32
25 AT5G12410 THUMP domain-containing protein 0.81 0.32 -0.31
26 AT2G19670 protein arginine methyltransferase 1A ARABIDOPSIS THALIANA PROTEIN
ARGININE METHYLTRANSFERASE 1A,
protein arginine methyltransferase
1A		 0.81 0.32 -0.32
27 AT3G26580 Tetratricopeptide repeat (TPR)-like superfamily protein -0.8 0.31 -0.31
28 AT5G59240 Ribosomal protein S8e family protein 0.8 0.31 -0.32
29 AT3G18200 nodulin MtN21 /EamA-like transporter family protein 0.8 0.33 -0.32
30 AT5G62440 Protein of unknown function (DUF3223) 0.8 0.31 -0.31
31 AT4G37980 elicitor-activated gene 3-1 ATCAD7, CINNAMYL-ALCOHOL
DEHYDROGENASE 7,
ELICITOR-ACTIVATED GENE 3,
elicitor-activated gene 3-1		 -0.79 0.32 -0.32
32 AT3G08840 D-alanine--D-alanine ligase family -0.79 0.32 -0.32
33 AT4G37270 heavy metal atpase 1 ARABIDOPSIS THALIANA HEAVY METAL
ATPASE 1, heavy metal atpase 1		 -0.79 0.33 -0.32
34 AT2G19970 CAP (Cysteine-rich secretory proteins, Antigen 5, and
Pathogenesis-related 1 protein) superfamily protein		 0.79 0.3 -0.34
35 AT1G63160 replication factor C 2 EMBRYO DEFECTIVE 2811, replication
factor C 2		 0.79 0.31 -0.31
36 AT1G18800 NAP1-related protein 2 NAP1-related protein 2 0.79 0.33 -0.34
37 AT4G23620 Ribosomal protein L25/Gln-tRNA synthetase,
anti-codon-binding domain		 0.78 0.31 -0.31
38 AT1G79470 Aldolase-type TIM barrel family protein 0.78 0.31 -0.32
39 AT2G39795 Mitochondrial glycoprotein family protein 0.78 0.33 -0.31
40 AT4G32720 La protein 1 La protein 1, La protein 1 0.78 0.3 -0.3
41 AT1G02900 rapid alkalinization factor 1 RAPID ALKALINIZATION FACTOR 1,
rapid alkalinization factor 1,
RALF-LIKE 1		 0.78 0.3 -0.33
42 AT5G64100 Peroxidase superfamily protein 0.78 0.3 -0.31
43 AT3G57150 homologue of NAP57 AtCBF5, AtNAP57, CBF5, homologue
of NAP57		 0.77 0.32 -0.31
44 AT1G19650 Sec14p-like phosphatidylinositol transfer family protein -0.77 0.33 -0.32
45 AT4G29890 choline monooxygenase, putative (CMO-like) -0.77 0.32 -0.32
46 AT3G07590 Small nuclear ribonucleoprotein family protein 0.77 0.32 -0.3
47 AT3G54360 zinc ion binding -0.77 0.32 -0.31
48 AT1G80340 gibberellin 3-oxidase 2 ARABIDOPSIS THALIANA
GIBBERELLIN-3-OXIDASE 2,
gibberellin 3-oxidase 2, GA4H		 0.77 0.31 -0.29
49 AT2G31725 Eukaryotic protein of unknown function (DUF842) 0.77 0.3 -0.34
50 AT3G56140 Protein of unknown function (DUF399 and DUF3411) -0.77 0.32 -0.31
51 AT3G03060 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.77 0.32 -0.32
52 AT1G15480 Tetratricopeptide repeat (TPR)-like superfamily protein 0.76 0.32 -0.31
53 AT1G74560 NAP1-related protein 1 NAP1-related protein 1 0.76 0.3 -0.35
54 AT3G13160 Tetratricopeptide repeat (TPR)-like superfamily protein 0.76 0.32 -0.35
55 AT1G25260 Ribosomal protein L10 family protein 0.76 0.34 -0.32
56 AT5G48070 xyloglucan endotransglucosylase/hydrolase 20 XYLOGLUCAN
ENDOTRANSGLUCOSYLASE/HYDROLASE 20,
xyloglucan
endotransglucosylase/hydrolase 20		 0.76 0.3 -0.31
57 AT5G15550 Transducin/WD40 repeat-like superfamily protein 0.76 0.33 -0.32
58 AT5G04600 RNA-binding (RRM/RBD/RNP motifs) family protein 0.76 0.32 -0.31
59 AT4G31120 SHK1 binding protein 1 ATPRMT5, PROTEIN ARGININE
METHYLTRANSFERASE 5, SHK1 binding
protein 1		 0.76 0.3 -0.31
60 AT3G23690 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.76 0.3 -0.31
61 AT5G57120 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: nucleolus;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: LisH
dimerisation motif (InterPro:IPR006594), SRP40, C-terminal
(InterPro:IPR007718); Has 101969 Blast hits to 55488
proteins in 2506 species: Archae - 424; Bacteria - 13843;
Metazoa - 37674; Fungi - 9726; Plants - 4941; Viruses -
569; Other Eukaryotes - 34792 (source: NCBI BLink).		 0.76 0.32 -0.3
62 AT4G37090 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.75 0.31 -0.32
63 AT2G40830 RING-H2 finger C1A RING-H2 finger C1A -0.75 0.31 -0.31
64 AT5G57815 Cytochrome c oxidase, subunit Vib family protein -0.75 0.3 -0.33
65 AT5G50920 CLPC homologue 1 ATHSP93-V, CLPC, CLPC homologue 1,
DE-REGULATED CAO ACCUMULATION 1,
HEAT SHOCK PROTEIN 93-V		 -0.75 0.32 -0.3
66 AT2G30210 laccase 3 laccase 3 0.75 0.32 -0.34
67 AT2G34310 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G29530.1); Has 1236 Blast hits to 680 proteins in
89 species: Archae - 0; Bacteria - 0; Metazoa - 473; Fungi
- 0; Plants - 332; Viruses - 0; Other Eukaryotes - 431
(source: NCBI BLink).		 -0.75 0.31 -0.31
68 AT2G23430 Cyclin-dependent kinase inhibitor family protein ICK1, KIP-RELATED PROTEIN 1 -0.75 0.31 -0.3
69 AT1G24070 cellulose synthase-like A10 cellulose synthase-like A10,
CELLULOSE SYNTHASE LIKE A10,
cellulose synthase-like A10		 -0.75 0.32 -0.31
70 AT5G54020 Cysteine/Histidine-rich C1 domain family protein 0.75 0.31 -0.3
71 AT2G36100 Uncharacterised protein family (UPF0497) Casparian strip membrane domain
protein 1		 0.75 0.31 -0.32
72 AT4G15475 F-box/RNI-like superfamily protein -0.75 0.31 -0.3
73 AT3G11830 TCP-1/cpn60 chaperonin family protein 0.75 0.31 -0.31
74 AT4G19030 NOD26-like major intrinsic protein 1 AT-NLM1, NOD26-LIKE MAJOR
INTRINSIC PROTEIN 1, NOD26-LIKE
INTRINSIC PROTEIN 1;1, NOD26-like
major intrinsic protein 1		 0.74 0.31 -0.34
75 AT1G70160 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT4G27020.1); Has 108 Blast hits to 108 proteins in
20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 89; Viruses - 0; Other Eukaryotes - 19 (source:
NCBI BLink).		 -0.74 0.3 -0.32
76 AT2G19990 pathogenesis-related protein-1-like pathogenesis-related
protein-1-like		 0.74 0.32 -0.33
77 AT3G02050 K+ uptake transporter 3 ARABIDOPSIS THALIANA POTASSIUM
TRANSPORTER 4, ATKUP3, K+ uptake
transporter 3		 -0.74 0.31 -0.29
78 AT5G27330 Prefoldin chaperone subunit family protein 0.74 0.31 -0.33
79 AT5G65670 indole-3-acetic acid inducible 9 indole-3-acetic acid inducible 9 0.74 0.3 -0.34
80 AT5G60730 Anion-transporting ATPase 0.74 0.31 -0.31
81 AT3G12860 NOP56-like pre RNA processing ribonucleoprotein 0.74 0.31 -0.34
82 AT1G03360 ribosomal RNA processing 4 ribosomal RNA processing 4,
ribosomal RNA processing 4		 0.74 0.34 -0.3
83 AT4G34360 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.74 0.3 -0.31
84 AT4G29220 phosphofructokinase 1 phosphofructokinase 1 -0.74 0.3 -0.34
85 AT1G03380 homolog of yeast autophagy 18 (ATG18) G homolog of yeast autophagy 18
(ATG18) G, homolog of yeast
autophagy 18 (ATG18) G		 -0.73 0.31 -0.31
86 AT1G15060 Uncharacterised conserved protein UCP031088, alpha/beta
hydrolase		 -0.73 0.32 -0.32
87 AT1G78680 gamma-glutamyl hydrolase 2 gamma-glutamyl hydrolase 2,
gamma-glutamyl hydrolase 2		 -0.73 0.33 -0.32
88 AT2G20920 Protein of unknown function (DUF3353) -0.73 0.32 -0.31
89 AT5G67630 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.73 0.31 -0.31
90 AT1G77690 like AUX1 3 like AUX1 3 0.73 0.3 -0.31
91 AT1G17360 BEST Arabidopsis thaliana protein match is:
COP1-interacting protein-related (TAIR:AT1G72410.1); Has
9949 Blast hits to 7480 proteins in 576 species: Archae -
12; Bacteria - 1007; Metazoa - 3636; Fungi - 982; Plants -
444; Viruses - 50; Other Eukaryotes - 3818 (source: NCBI
BLink).		 -0.73 0.32 -0.33
92 AT4G11960 PGR5-like B PGR5-like B -0.73 0.31 -0.29
93 AT1G18450 actin-related protein 4 actin-related protein 4,
actin-related protein 4		 0.73 0.32 -0.32
94 AT2G44790 uclacyanin 2 uclacyanin 2 0.73 0.31 -0.32
95 AT3G46210 Ribosomal protein S5 domain 2-like superfamily protein 0.73 0.31 -0.32
96 AT1G05200 glutamate receptor 3.4 glutamate receptor 3.4, glutamate
receptor 3.4, GLUR3		 -0.72 0.31 -0.33
97 AT1G55280 Lipase/lipooxygenase, PLAT/LH2 family protein -0.72 0.31 -0.32
98 AT4G26980 RNI-like superfamily protein -0.72 0.31 -0.33
99 AT3G59090 CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF1084 (InterPro:IPR009457); BEST Arabidopsis thaliana
protein match is: tobamovirus multiplication 1
(TAIR:AT4G21790.1); Has 196 Blast hits to 195 proteins in
29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
2; Plants - 188; Viruses - 0; Other Eukaryotes - 6 (source:
NCBI BLink).		 -0.71 0.31 -0.32
100 AT4G32320 ascorbate peroxidase 6 ascorbate peroxidase 6 -0.71 0.32 -0.32
101 AT4G18975 Pentatricopeptide repeat (PPR) superfamily protein -0.71 0.31 -0.33
102 AT3G25740 methionine aminopeptidase 1C methionine aminopeptidase 1C,
METHIONINE AMINOPEPTIDASE 1C		 -0.7 0.32 -0.32
103 AT1G28320 protease-related DEG15 -0.7 0.3 -0.33
104 AT5G65840 Thioredoxin superfamily protein -0.7 0.31 -0.3
105 AT5G56270 WRKY DNA-binding protein 2 ARABIDOPSIS THALIANA WRKY
DNA-BINDING PROTEIN 2, WRKY
DNA-binding protein 2		 -0.7 0.32 -0.32
106 AT2G46580 Pyridoxamine 5'-phosphate oxidase family protein -0.7 0.34 -0.32
107 AT3G01180 starch synthase 2 starch synthase 2, starch synthase
2		 -0.7 0.3 -0.33
108 AT3G60340 alpha/beta-Hydrolases superfamily protein -0.69 0.32 -0.31
109 AT5G49970 pyridoxin (pyrodoxamine) 5'-phosphate oxidase pyridoxin (pyrodoxamine)
5'-phosphate oxidase, HOMOLOG OF
YEAST PYRIDOXINE AUXOTROPHY 3,
pyridoxin (pyrodoxamine)
5'-phosphate oxidase		 -0.69 0.33 -0.32
110 AT5G48850 Tetratricopeptide repeat (TPR)-like superfamily protein SULPHUR DEFICIENCY-INDUCED 1 -0.69 0.31 -0.29
111 AT3G19900 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF3067 (InterPro:IPR021420);
Has 276 Blast hits to 276 proteins in 83 species: Archae -
0; Bacteria - 112; Metazoa - 0; Fungi - 2; Plants - 59;
Viruses - 0; Other Eukaryotes - 103 (source: NCBI BLink).		 -0.69 0.3 -0.3
112 AT3G63520 carotenoid cleavage dioxygenase 1 CAROTENOID CLEAVAGE DIOXYGENASE 1,
ATNCED1, carotenoid cleavage
dioxygenase 1, NCED1		 -0.69 0.3 -0.32
113 AT2G35050 Protein kinase superfamily protein with
octicosapeptide/Phox/Bem1p domain		 -0.69 0.32 -0.32
114 AT2G24860 DnaJ/Hsp40 cysteine-rich domain superfamily protein -0.69 0.31 -0.31
115 AT4G11980 nudix hydrolase homolog 14 ARABIDOPSIS THALIANA NUDIX
HYDROLASE HOMOLOG 14, nudix
hydrolase homolog 14, nudix
hydrolase homolog 14		 -0.68 0.31 -0.3
116 AT5G11840 Protein of unknown function (DUF1230) -0.68 0.3 -0.31
117 AT3G26000 Ribonuclease inhibitor -0.68 0.3 -0.3
118 AT5G15860 prenylcysteine methylesterase prenylcysteine methylesterase,
Isoprenylcysteine methylesterase,
prenylcysteine methylesterase		 -0.68 0.31 -0.31
119 AT2G45990 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; Has 312
Blast hits to 312 proteins in 90 species: Archae - 0;
Bacteria - 131; Metazoa - 0; Fungi - 0; Plants - 67;
Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink).		 -0.68 0.31 -0.32
120 AT5G11350 DNAse I-like superfamily protein -0.67 0.34 -0.33
121 AT5G58200 Calcineurin-like metallo-phosphoesterase superfamily
protein		 -0.67 0.31 -0.29
122 AT2G47390 Prolyl oligopeptidase family protein -0.67 0.3 -0.31
123 AT5G50160 ferric reduction oxidase 8 FERRIC REDUCTION OXIDASE 8, ferric
reduction oxidase 8		 -0.67 0.31 -0.33
124 AT4G33490 Eukaryotic aspartyl protease family protein -0.67 0.3 -0.31
125 AT3G48350 Cysteine proteinases superfamily protein cysteine endopeptidase 3 -0.67 0.31 -0.32
126 AT1G49970 CLP protease proteolytic subunit 1 CLP protease proteolytic subunit
1, NUCLEAR CLPP 5, SUPPRESSOR OF
VARIEGATION 2		 -0.67 0.31 -0.33
127 AT4G14910 HISTIDINE BIOSYNTHESIS 5B HISTIDINE BIOSYNTHESIS 5B -0.66 0.32 -0.31
128 AT5G11720 Glycosyl hydrolases family 31 protein -0.66 0.3 -0.31
129 AT4G23670 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 -0.66 0.3 -0.31
130 AT4G23600 Tyrosine transaminase family protein CORONATINE INDUCED 1, JASMONIC
ACID RESPONSIVE 2		 -0.66 0.33 -0.3
131 AT4G09340 SPla/RYanodine receptor (SPRY) domain-containing protein -0.66 0.31 -0.32
132 AT3G60810 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1499 (InterPro:IPR010865); Has 444
Blast hits to 444 proteins in 143 species: Archae - 0;
Bacteria - 268; Metazoa - 0; Fungi - 0; Plants - 51;
Viruses - 0; Other Eukaryotes - 125 (source: NCBI BLink).		 -0.66 0.34 -0.31
133 AT2G14080 Disease resistance protein (TIR-NBS-LRR class) family -0.66 0.28 -0.33
134 AT1G11720 starch synthase 3 starch synthase 3, starch synthase
3		 -0.66 0.31 -0.3