AGICode | AT3G30800 |
Description | transposable element gene |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT3G30800 | transposable element gene | 1 | 0.34 | -0.33 | |||
2 | AT3G20570 | early nodulin-like protein 9 | AtENODL9, early nodulin-like protein 9 |
-0.7 | 0.32 | -0.32 | ||
3 | AT1G23910 | Polyketide cyclase/dehydrase and lipid transport superfamily protein |
0.69 | 0.34 | -0.32 | |||
4 | AT1G04050 | homolog of SU(var)3-9 1 | SET DOMAIN PROTEIN 13, homolog of SU(var)3-9 1 |
0.68 | 0.31 | -0.32 | ||
5 | AT2G14550 | pseudogene, putative pre-mRNA splicing factor, non-consensus splice donor TA at exon 5; blastp match of 67% identity and 1.1e-68 P-value to GP|28374170|gb|AAH45264.1||BC045264 Similar to splicing factor 3b, subunit 4, 49kD {Xenopus laevis} |
-0.67 | 0.32 | -0.32 | |||
6 | AT4G36750 | Quinone reductase family protein | -0.65 | 0.3 | -0.31 | |||
7 | AT2G06120 | transposable element gene | 0.65 | 0.3 | -0.32 | |||
8 | AT1G21710 | 8-oxoguanine-DNA glycosylase 1 | ARABIDOPSIS 8-OXOGUANINE-DNA GLYCOSYLASE 1, 8-oxoguanine-DNA glycosylase 1 |
0.63 | 0.32 | -0.31 | ||
9 | AT1G78260 | RNA-binding (RRM/RBD/RNP motifs) family protein | -0.63 | 0.32 | -0.31 | |||
10 | AT1G21720 | proteasome beta subunit C1 | proteasome beta subunit C1 | -0.63 | 0.32 | -0.33 | ||
11 | AT3G57070 | Glutaredoxin family protein | -0.62 | 0.29 | -0.32 | |||
12 | AT5G49590 | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.62 | 0.32 | -0.32 | |||
13 | AT3G51260 | 20S proteasome alpha subunit PAD1 | 20S proteasome alpha subunit PAD1 | -0.62 | 0.3 | -0.32 | ||
14 | AT5G20650 | copper transporter 5 | copper transporter 5 | -0.61 | 0.31 | -0.3 | ||
15 | AT5G44860 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G19950.1); Has 233 Blast hits to 227 proteins in 25 species: Archae - 0; Bacteria - 13; Metazoa - 1; Fungi - 0; Plants - 216; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). |
-0.61 | 0.33 | -0.33 | |||
16 | AT3G56700 | fatty acid reductase 6 | AtFAR6, fatty acid reductase 6 | -0.6 | 0.32 | -0.31 | ||
17 | AT2G38350 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.6 | 0.33 | -0.33 | |||
18 | AT4G28770 | Tetraspanin family protein | -0.6 | 0.31 | -0.28 | |||
19 | AT2G15570 | Thioredoxin superfamily protein | ATHM3, Arabidopsis thioredoxin M-type 3, GFP ARRESTED TRAFFICKING 1, THIOREDOXIN-M3 |
-0.6 | 0.31 | -0.3 | ||
20 | AT1G78620 | Protein of unknown function DUF92, transmembrane | -0.6 | 0.31 | -0.32 | |||
21 | AT4G30570 | Glucose-1-phosphate adenylyltransferase family protein | 0.6 | 0.32 | -0.3 | |||
22 | AT3G50590 | Transducin/WD40 repeat-like superfamily protein | -0.6 | 0.32 | -0.31 | |||
23 | AT5G03070 | importin alpha isoform 9 | importin alpha isoform 9 | 0.6 | 0.32 | -0.33 | ||
24 | AT1G02130 | RAS 5 | RAS 5, ARABIDOPSIS RAS 5, ARABIDOPSIS THALIANA RESPONSIVE TO ABSCISIC ACID 1B, ARABIDOPSIS THALIANA RAB D2A, RAS 5, RAB D2A |
-0.6 | 0.3 | -0.32 | ||
25 | AT1G29570 | Zinc finger C-x8-C-x5-C-x3-H type family protein | -0.59 | 0.32 | -0.32 | |||
26 | AT1G48980 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
-0.59 | 0.3 | -0.34 | |||
27 | AT4G02460 | DNA mismatch repair protein, putative | POSTMEIOTIC SEGREGATION 1 | 0.59 | 0.31 | -0.31 | ||
28 | AT5G39700 | myb domain protein 89 | myb domain protein 89, myb domain protein 89 |
0.59 | 0.31 | -0.31 | ||
29 | AT1G50670 | OTU-like cysteine protease family protein | -0.58 | 0.31 | -0.3 | |||
30 | AT5G63870 | serine/threonine phosphatase 7 | ATPP7, serine/threonine phosphatase 7 |
-0.58 | 0.33 | -0.31 | ||
31 | AT2G19000 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; Has 71 Blast hits to 71 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 69; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.58 | 0.3 | -0.29 | |||
32 | AT5G02040 | prenylated RAB acceptor 1.A1 | prenylated RAB acceptor 1.A1 | -0.58 | 0.33 | -0.33 | ||
33 | AT1G51690 | protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform |
protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform, protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform |
-0.58 | 0.32 | -0.31 | ||
34 | AT3G29640 | transposable element gene | -0.58 | 0.3 | -0.32 | |||
35 | AT1G29520 | AWPM-19-like family protein | -0.57 | 0.3 | -0.29 | |||
36 | AT4G34330 | Protein of unknown function (DUF677) | 0.57 | 0.31 | -0.31 | |||
37 | AT5G43230 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01810.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.57 | 0.32 | -0.29 | |||
38 | AT3G56740 | Ubiquitin-associated (UBA) protein | -0.57 | 0.31 | -0.32 | |||
39 | AT2G19180 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G16840.1); Has 64 Blast hits to 64 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.57 | 0.29 | -0.31 | |||
40 | AT2G36440 | unknown protein; Has 3 Blast hits to 3 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.57 | 0.31 | -0.31 | |||
41 | AT2G32050 | Family of unknown function (DUF572) | 0.57 | 0.33 | -0.34 | |||
42 | AT5G54220 | Cysteine-rich protein | 0.57 | 0.31 | -0.28 | |||
43 | AT5G26270 | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.56 | 0.3 | -0.3 | |||
44 | AT4G00230 | xylem serine peptidase 1 | xylem serine peptidase 1 | -0.56 | 0.32 | -0.33 | ||
45 | AT4G14530 | BEST Arabidopsis thaliana protein match is: AGAMOUS-like 97 (TAIR:AT1G46408.1); Has 21 Blast hits to 21 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.56 | 0.32 | -0.31 | |||
46 | AT5G20060 | alpha/beta-Hydrolases superfamily protein | -0.56 | 0.31 | -0.33 | |||
47 | AT5G40270 | HD domain-containing metal-dependent phosphohydrolase family protein |
-0.56 | 0.33 | -0.31 | |||
48 | AT1G20135 | GDSL-like Lipase/Acylhydrolase family protein | 0.56 | 0.32 | -0.33 | |||
49 | AT2G19600 | K+ efflux antiporter 4 | K+ efflux antiporter 4, KEA4, K+ efflux antiporter 4 |
0.56 | 0.3 | -0.32 | ||
50 | AT1G32840 | transposable element gene | -0.56 | 0.33 | -0.32 | |||
51 | AT1G70330 | equilibrative nucleotide transporter 1 | equilibrative nucleotide transporter 1, equilibrative nucleotide transporter 1 |
-0.55 | 0.34 | -0.3 | ||
52 | AT1G27380 | ROP-interactive CRIB motif-containing protein 2 | ROP-interactive CRIB motif-containing protein 2 |
-0.55 | 0.32 | -0.32 | ||
53 | AT3G06000 | RNI-like superfamily protein | 0.55 | 0.32 | -0.32 | |||
54 | AT3G32090 | WRKY family transcription factor | -0.55 | 0.3 | -0.3 | |||
55 | AT5G42230 | serine carboxypeptidase-like 41 | serine carboxypeptidase-like 41 | 0.55 | 0.32 | -0.32 | ||
56 | AT5G47870 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: cobalt ion binding (TAIR:AT1G71310.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
radiation sensitive 51-2, RAD52-2B | -0.55 | 0.3 | -0.31 | ||
57 | AT3G07565 | Protein of unknown function (DUF3755) | -0.54 | 0.32 | -0.35 | |||
58 | AT5G28860 | transposable element gene | -0.54 | 0.3 | -0.33 | |||
59 | AT3G02900 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G16660.1); Has 80 Blast hits to 80 proteins in 21 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.54 | 0.32 | -0.33 | |||
60 | AT5G56480 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
0.54 | 0.3 | -0.32 | |||
61 | AT1G35820 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G30520.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.54 | 0.31 | -0.32 | |||
62 | AT4G25430 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G51850.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.53 | 0.33 | -0.31 | |||
63 | AT5G12280 | SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein |
-0.53 | 0.3 | -0.31 | |||
64 | AT2G25930 | hydroxyproline-rich glycoprotein family protein | EARLY FLOWERING 3, PYK20 | 0.53 | 0.32 | -0.33 | ||
65 | AT2G34990 | RING/U-box superfamily protein | -0.53 | 0.3 | -0.31 | |||
66 | AT2G23440 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: root; Has 25 Blast hits to 25 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.52 | 0.32 | -0.31 | |||
67 | AT3G28345 | ABC transporter family protein | ATP-binding cassette B15, multi-drug resistance 13 |
-0.52 | 0.33 | -0.31 | ||
68 | AT2G47430 | Signal transduction histidine kinase | CYTOKININ-INDEPENDENT 1 | -0.52 | 0.33 | -0.31 | ||
69 | AT5G23570 | XS domain-containing protein / XS zinc finger domain-containing protein-related |
SUPPRESSOR OF GENE SILENCING 3, SUPPRESSOR OF GENE SILENCING 3 |
0.52 | 0.34 | -0.33 | ||
70 | AT3G45430 | Concanavalin A-like lectin protein kinase family protein | -0.52 | 0.31 | -0.33 | |||
71 | AT1G26310 | K-box region and MADS-box transcription factor family protein |
AGAMOUS-like 10, CAULIFLOWER, CAL1 | -0.52 | 0.32 | -0.32 | ||
72 | AT1G52020 | transposable element gene | 0.52 | 0.32 | -0.3 | |||
73 | AT1G52920 | G protein coupled receptor | G-PROTEIN COUPLED RECEPTOR 2, G protein coupled receptor |
0.52 | 0.33 | -0.33 | ||
74 | AT3G57810 | Cysteine proteinases superfamily protein | -0.52 | 0.3 | -0.32 | |||
75 | AT3G62170 | VANGUARD 1 homolog 2 | VANGUARD 1 homolog 2 | 0.51 | 0.31 | -0.3 |