AT3G23900 : -
Query Information
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AGICode AT3G23900
Description RNA recognition motif (RRM)-containing protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G23900 RNA recognition motif (RRM)-containing protein 1 0.32 -0.31
2 AT4G10890 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF2439 (InterPro:IPR018838); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G43722.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 0.67 0.33 -0.31
3 AT1G55820 Kinase-related protein of unknown function (DUF1296) 0.67 0.33 -0.31
4 AT4G32970 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G32960.1); Has 552 Blast hits
to 489 proteins in 85 species: Archae - 4; Bacteria - 14;
Metazoa - 187; Fungi - 12; Plants - 225; Viruses - 0; Other
Eukaryotes - 110 (source: NCBI BLink).		 0.65 0.3 -0.3
5 AT3G57890 Tubulin binding cofactor C domain-containing protein 0.65 0.29 -0.3
6 AT1G25375 Metallo-hydrolase/oxidoreductase superfamily protein -0.65 0.31 -0.32
7 AT4G28270 RING membrane-anchor 2 ATRMA2, RING membrane-anchor 2 -0.64 0.34 -0.32
8 AT1G78570 rhamnose biosynthesis 1 ARABIDOPSIS THALIANA RHAMNOSE
BIOSYNTHESIS 1, rhamnose
biosynthesis 1, REPRESSOR OF LRX1
1		 0.64 0.31 -0.32
9 AT5G38840 SMAD/FHA domain-containing protein 0.63 0.3 -0.33
10 AT5G47720 Thiolase family protein -0.63 0.31 -0.31
11 AT5G23480 SWIB/MDM2 domain;Plus-3;GYF 0.63 0.28 -0.33
12 AT5G50840 CONTAINS InterPro DOMAIN/s: Taxilin (InterPro:IPR019132);
Has 30201 Blast hits to 17322 proteins in 780 species:
Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi -
3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996
(source: NCBI BLink).		 0.63 0.31 -0.31
13 AT3G09540 Pectin lyase-like superfamily protein 0.62 0.33 -0.3
14 AT3G58050 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G41960.1); Has 13384 Blast
hits to 8116 proteins in 546 species: Archae - 41; Bacteria
- 766; Metazoa - 5596; Fungi - 1431; Plants - 589; Viruses
- 46; Other Eukaryotes - 4915 (source: NCBI BLink).		 0.62 0.34 -0.34
15 AT1G48120 hydrolases;protein serine/threonine phosphatases 0.62 0.31 -0.33
16 AT5G12470 Protein of unknown function (DUF3411) 0.62 0.31 -0.32
17 AT3G12680 floral homeotic protein (HUA1) ENHANCER OF AG-4 1 0.62 0.31 -0.32
18 AT4G12640 RNA recognition motif (RRM)-containing protein 0.61 0.31 -0.33
19 AT4G28020 unknown protein; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0066
(InterPro:IPR001378); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.61 0.33 -0.3
20 AT1G27910 plant U-box 45 ARABIDOPSIS THALIANA PLANT U-BOX
45, plant U-box 45		 0.61 0.3 -0.31
21 AT4G22753 sterol 4-alpha methyl oxidase 1-3 ATSMO1-3, sterol 4-alpha methyl
oxidase 1-3		 -0.61 0.3 -0.32
22 AT5G36230 ARM repeat superfamily protein 0.6 0.33 -0.3
23 AT1G01670 RING/U-box superfamily protein -0.6 0.31 -0.31
24 AT4G37790 Homeobox-leucine zipper protein family HAT22 -0.6 0.3 -0.33
25 AT5G40390 Raffinose synthase family protein raffinose synthase 5, seed
imbibition 1-like		 0.6 0.31 -0.3
26 AT1G48410 Stabilizer of iron transporter SufD / Polynucleotidyl
transferase		 ARGONAUTE 1 0.59 0.32 -0.33
27 AT1G54740 Protein of unknown function (DUF3049) -0.59 0.3 -0.31
28 AT4G23410 tetraspanin5 tetraspanin5 -0.59 0.32 -0.35
29 AT1G71180 6-phosphogluconate dehydrogenase family protein -0.59 0.31 -0.31
30 AT4G24200 Transcription elongation factor (TFIIS) family protein 0.59 0.32 -0.3
31 AT1G65000 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G38060.1); Has 49 Blast hits
to 49 proteins in 14 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.59 0.31 -0.31
32 AT1G49310 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 9 plant structures;
EXPRESSED DURING: LP.04 four leaves visible, petal
differentiation and expansion stage; Has 11 Blast hits to
11 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 11; Viruses - 0; Other Eukaryotes
- 0 (source: NCBI BLink).		 0.58 0.31 -0.32
33 AT5G06970 Protein of unknown function (DUF810) 0.58 0.31 -0.32
34 AT2G32250 FAR1-related sequence 2 FAR1-related sequence 2 0.58 0.29 -0.31
35 AT5G53220 unknown protein; Has 3099 Blast hits to 2528 proteins in
332 species: Archae - 2; Bacteria - 245; Metazoa - 1059;
Fungi - 555; Plants - 177; Viruses - 49; Other Eukaryotes -
1012 (source: NCBI BLink).		 -0.58 0.32 -0.31
36 AT3G55940 Phosphoinositide-specific phospholipase C family protein 0.57 0.29 -0.34
37 AT1G63930 from the Czech 'roh' meaning 'corner' from the Czech 'roh' meaning
'corner'		 0.57 0.31 -0.32
38 AT3G44680 histone deacetylase 9 HDA09, histone deacetylase 9 0.57 0.32 -0.31
39 AT3G22450 Ribosomal L18p/L5e family protein 0.57 0.3 -0.32
40 AT4G26830 O-Glycosyl hydrolases family 17 protein 0.57 0.33 -0.33
41 AT5G04840 bZIP protein 0.57 0.35 -0.29
42 AT1G70060 SIN3-like 4 SIN3-like 4 0.57 0.31 -0.31
43 AT3G61860 RNA-binding (RRM/RBD/RNP motifs) family protein arginine/serine-rich splicing
factor 31, arginine/serine-rich
splicing factor 31,
arginine/serine-rich splicing
factor 31, arginine/serine-rich
splicing factor 31		 -0.56 0.33 -0.31
44 AT1G12780 UDP-D-glucose/UDP-D-galactose 4-epimerase 1 A. THALIANA UDP-GLC 4-EPIMERASE 1,
UDP-D-glucose/UDP-D-galactose
4-epimerase 1		 -0.55 0.32 -0.31
45 AT1G72160 Sec14p-like phosphatidylinositol transfer family protein -0.55 0.32 -0.32
46 AT5G56610 Phosphotyrosine protein phosphatases superfamily protein -0.55 0.31 -0.31
47 AT4G01960 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G02380.1); Has 67 Blast hits
to 67 proteins in 11 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.55 0.33 -0.31
48 AT2G02350 SKP1 interacting partner 3 Phloem protein 2-B9, SKP1
interacting partner 3		 -0.54 0.31 -0.32
49 AT5G03770 KDO transferase A AtKdtA, KDO transferase A -0.54 0.32 -0.33
50 AT3G13450 Transketolase family protein DARK INDUCIBLE 4 -0.54 0.29 -0.32
51 AT5G18840 Major facilitator superfamily protein -0.53 0.33 -0.3
52 AT1G52240 RHO guanyl-nucleotide exchange factor 11 ATROPGEF11, phytochrome
interacting RopGEF 1, RHO
guanyl-nucleotide exchange factor
11		 -0.53 0.32 -0.32
53 AT1G12790 CONTAINS InterPro DOMAIN/s: RuvA domain 2-like
(InterPro:IPR010994); Has 29 Blast hits to 29 proteins in 9
species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0;
Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.53 0.32 -0.31
54 AT1G14340 RNA-binding (RRM/RBD/RNP motifs) family protein -0.52 0.31 -0.32
55 AT4G00350 MATE efflux family protein -0.52 0.34 -0.3