AT3G13550 : CYTOKININ-INSENSITIVE 4
Query Information
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AGICode AT3G13550
Description Ubiquitin-conjugating enzyme family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G13550 Ubiquitin-conjugating enzyme family protein CYTOKININ-INSENSITIVE 4,
CONSTITUTIVE PHOTOMORPHOGENIC 10,
EMBRYO DEFECTIVE 144, FUSCA 9		 1 0.3 -0.27
2 AT1G36320 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G37920.1); Has 93 Blast hits
to 90 proteins in 22 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 85; Viruses - 0; Other
Eukaryotes - 8 (source: NCBI BLink).		 0.79 0.32 -0.3
3 AT5G63890 histidinol dehydrogenase histidinol dehydrogenase,
histidinol dehydrogenase,
HISTIDINE BIOSYNTHESIS 8		 0.76 0.32 -0.29
4 AT2G20860 lipoic acid synthase 1 lipoic acid synthase 1 0.76 0.32 -0.31
5 AT2G39080 NAD(P)-binding Rossmann-fold superfamily protein EMBRYO DEFECTIVE 2799 0.75 0.3 -0.33
6 AT2G37500 arginine biosynthesis protein ArgJ family 0.75 0.31 -0.29
7 AT3G10670 non-intrinsic ABC protein 7 ATP-binding cassette I6,
non-intrinsic ABC protein 7,
non-intrinsic ABC protein 7		 0.74 0.32 -0.29
8 AT5G44250 Protein of unknown function DUF829, transmembrane 53 0.73 0.33 -0.32
9 AT5G06580 FAD-linked oxidases family protein 0.73 0.31 -0.31
10 AT5G49940 NIFU-like protein 2 CHLOROPLAST-LOCALIZED NIFU-LIKE
PROTEIN 2, NIFU-like protein 2		 0.72 0.29 -0.32
11 AT1G11750 CLP protease proteolytic subunit 6 CLP protease proteolytic subunit
6, NUCLEAR-ENCODED CLPP 1, NCLPP6		 0.72 0.3 -0.32
12 AT3G50520 Phosphoglycerate mutase family protein 0.71 0.33 -0.29
13 AT4G22310 Uncharacterised protein family (UPF0041) 0.71 0.33 -0.34
14 AT5G58240 FRAGILE HISTIDINE TRIAD FRAGILE HISTIDINE TRIAD 0.71 0.32 -0.31
15 AT5G08460 GDSL-like Lipase/Acylhydrolase superfamily protein 0.71 0.31 -0.29
16 AT5G40810 Cytochrome C1 family 0.7 0.32 -0.33
17 AT5G26880 AGAMOUS-like 26 AGAMOUS-like 26 0.7 0.32 -0.31
18 AT2G04360 unknown protein; FUNCTIONS IN: molecular_function unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to
34131 proteins in 2444 species: Archae - 798; Bacteria -
22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses -
0; Other Eukaryotes - 9610 (source: NCBI BLink).		 0.7 0.31 -0.3
19 AT5G45390 CLP protease P4 CLP protease P4, NUCLEAR-ENCODED
CLP PROTEASE P4		 0.7 0.33 -0.34
20 AT3G13490 Lysyl-tRNA synthetase, class II ARABIDOPSIS THALIANA LYSYL-TRNA
SYNTHETASE 2, OVULE ABORTION 5		 0.7 0.29 -0.31
21 AT1G06820 carotenoid isomerase CAROTENOID AND CHLOROPLAST
REGULATION 2, carotenoid isomerase		 0.7 0.33 -0.3
22 AT5G54750 Transport protein particle (TRAPP) component 0.7 0.32 -0.32
23 AT2G19940 oxidoreductases, acting on the aldehyde or oxo group of
donors, NAD or NADP as acceptor;copper ion binding		 0.69 0.3 -0.32
24 AT4G31720 TBP-associated factor II 15 SALT TOLERANCE DURING GERMINATION
1, TBP-ASSOCIATED FACTOR 10,
TBP-associated factor II 15		 0.69 0.33 -0.29
25 AT4G17510 ubiquitin C-terminal hydrolase 3 ubiquitin C-terminal hydrolase 3 0.68 0.33 -0.35
26 AT4G33350 Tic22-like family protein translocon at the inner envelope
membrane of chloroplasts 22-IV,
translocon at the inner envelope
membrane of chloroplasts 22-IV		 0.68 0.31 -0.32
27 AT2G44620 mitochondrial acyl carrier protein 1 mitochondrial acyl carrier protein
1, MITOCHONDRIAL ACYL CARRIER
PROTEIN 1		 0.68 0.33 -0.29
28 AT5G60750 CAAX amino terminal protease family protein 0.68 0.31 -0.29
29 AT4G39150 DNAJ heat shock N-terminal domain-containing protein 0.68 0.31 -0.32
30 AT3G13670 Protein kinase family protein 0.68 0.3 -0.31
31 AT5G57850 D-aminoacid aminotransferase-like PLP-dependent enzymes
superfamily protein		 0.68 0.3 -0.32
32 AT3G18420 Protein prenylyltransferase superfamily protein 0.67 0.32 -0.32
33 AT2G20690 lumazine-binding family protein 0.67 0.3 -0.31
34 AT4G17300 Class II aminoacyl-tRNA and biotin synthetases superfamily
protein		 ATNS1, NS1, ovule abortion 8 0.67 0.31 -0.3
35 AT2G44050 6,7-dimethyl-8-ribityllumazine synthase / DMRL synthase /
lumazine synthase / riboflavin synthase		 COI1 SUPPRESSOR1, coronatine
insensitive1 suppressor		 0.67 0.32 -0.33
36 AT5G48470 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.66 0.31 -0.33
37 AT5G17290 autophagy protein Apg5 family AUTOPHAGY 5, ATATG5, AUTOPHAGY 5 0.66 0.3 -0.3
38 AT3G13800 Metallo-hydrolase/oxidoreductase superfamily protein 0.66 0.32 -0.32
39 AT4G21160 Calcium-dependent ARF-type GTPase activating protein family ARF-GAP domain 12, ZAC 0.66 0.32 -0.3
40 AT3G02900 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G16660.1); Has 80 Blast
hits to 80 proteins in 21 species: Archae - 0; Bacteria -
4; Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.64 0.31 -0.35
41 AT2G45640 SIN3 associated polypeptide P18 SIN3 ASSOCIATED POLYPEPTIDE 18,
SIN3 associated polypeptide P18		 0.64 0.31 -0.31
42 AT1G33265 Transmembrane proteins 14C 0.64 0.31 -0.32
43 AT5G34940 glucuronidase 3 glucuronidase 3, glucuronidase 3 -0.64 0.34 -0.3
44 AT5G10460 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 0.64 0.32 -0.29
45 AT2G30105 CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical
subtype (InterPro:IPR003591), Leucine-rich repeat
(InterPro:IPR001611), Ubiquitin (InterPro:IPR000626),
Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis
thaliana protein match is: Leucine-rich repeat (LRR) family
protein (TAIR:AT5G07910.1).		 0.63 0.3 -0.3
46 AT3G58630 sequence-specific DNA binding transcription factors 0.63 0.33 -0.31
47 AT1G57590 Pectinacetylesterase family protein -0.63 0.3 -0.32
48 AT1G64620 Dof-type zinc finger DNA-binding family protein -0.61 0.33 -0.34
49 AT1G11570 NTF2-like NTF2-like 0.61 0.29 -0.31
50 AT4G21310 Protein of unknown function (DUF1218) 0.61 0.31 -0.33
51 AT3G09310 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF37 (InterPro:IPR002696); Has 5781 Blast
hits to 5781 proteins in 1903 species: Archae - 0; Bacteria
- 3956; Metazoa - 2; Fungi - 0; Plants - 42; Viruses - 3;
Other Eukaryotes - 1778 (source: NCBI BLink).		 0.61 0.33 -0.31
52 AT3G01270 Pectate lyase family protein 0.61 0.33 -0.32
53 AT2G22930 UDP-Glycosyltransferase superfamily protein -0.58 0.3 -0.31
54 AT4G15500 UDP-Glycosyltransferase superfamily protein UGT84A4 -0.57 0.31 -0.33
55 AT5G67090 Subtilisin-like serine endopeptidase family protein -0.57 0.3 -0.31
56 AT2G13500 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G41590.1); Has 126 Blast hits
to 126 proteins in 7 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 126; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.56 0.3 -0.31
57 AT3G09750 Galactose oxidase/kelch repeat superfamily protein -0.56 0.3 -0.33
58 AT3G43150 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G11010.1); Has 34 Blast hits
to 32 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.55 0.32 -0.32
59 AT1G29050 TRICHOME BIREFRINGENCE-LIKE 38 TRICHOME BIREFRINGENCE-LIKE 38 -0.54 0.32 -0.3
60 AT3G56060 Glucose-methanol-choline (GMC) oxidoreductase family
protein		 -0.53 0.3 -0.31
61 AT1G71690 Protein of unknown function (DUF579) -0.52 0.3 -0.31
62 AT1G42700 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
response to cold; LOCATED IN: nucleus; BEST Arabidopsis
thaliana protein match is: Plant transposase (Ptta/En/Spm
family) (TAIR:AT1G40087.1); Has 10 Blast hits to 10
proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 10; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.52 0.32 -0.29
63 AT3G51070 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.51 0.32 -0.31
64 AT2G28755 UDP-D-glucuronate carboxy-lyase-related -0.51 0.32 -0.31
65 AT3G26880 Plant self-incompatibility protein S1 family -0.5 0.29 -0.35
66 AT5G44420 plant defensin 1.2 LOW-MOLECULAR-WEIGHT CYSTEINE-RICH
77, plant defensin 1.2, PLANT
DEFENSIN 1.2A		 -0.5 0.32 -0.32
67 AT1G30860 RING/U-box superfamily protein -0.48 0.3 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
68 C0018 sn-Glycerol-3-phosphate D,L-sn-Glycerol-3-phosphate sn-Glycerol-3-phosphate CDP-diacylglycerol biosynthesis II,
phosphatidylglycerol biosynthesis II (non-plastidic),
triacylglycerol biosynthesis,
glycerol degradation IV,
glycerol-3-phosphate shuttle,
a quinone + sn-glycerol-3-phosphate -> a quinol + dihydroxyacetone phosphate,
CDP-diacylglycerol biosynthesis I,
cardiolipin biosynthesis II,
phosphatidylglycerol biosynthesis I (plastidic),
sn-glycerol-3-phosphate + a ubiquinone -> a ubiquinol + dihydroxyacetone phosphate,
an electron-transfer-related quinone + sn-glycerol-3-phosphate -> an electron-transfer-related quinol + dihydroxyacetone phosphate 		0.66 0.44 -0.45 C0018
69 C0187 Neoeriocitrin - - - -0.64 0.44 -0.44