AT3G13430 : -
Query Information
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AGICode AT3G13430
Description RING/U-box superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G13430 RING/U-box superfamily protein 1 0.31 -0.27
2 AT1G28280 VQ motif-containing protein 0.83 0.34 -0.3
3 AT1G76630 Tetratricopeptide repeat (TPR)-like superfamily protein -0.81 0.33 -0.31
4 AT3G54300 vesicle-associated membrane protein 727 vesicle-associated membrane
protein 727, VAMP727,
vesicle-associated membrane
protein 727		 0.8 0.3 -0.33
5 AT1G79590 syntaxin of plants 52 ATSYP52, syntaxin of plants 52 0.79 0.29 -0.3
6 AT4G14970 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED
DURING: 6 growth stages; Has 257 Blast hits to 164 proteins
in 70 species: Archae - 0; Bacteria - 4; Metazoa - 189;
Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 26
(source: NCBI BLink).		 -0.77 0.32 -0.3
7 AT4G22780 ACT domain repeat 7 ACT domain repeat 7 0.76 0.32 -0.31
8 AT4G32040 KNOTTED1-like homeobox gene 5 KNOTTED1-like homeobox gene 5 0.76 0.31 -0.31
9 AT5G17640 Protein of unknown function (DUF1005) 0.75 0.33 -0.3
10 AT3G57480 zinc finger (C2H2 type, AN1-like) family protein 0.75 0.3 -0.32
11 AT5G43190 Galactose oxidase/kelch repeat superfamily protein 0.75 0.31 -0.32
12 AT3G19680 Protein of unknown function (DUF1005) 0.75 0.32 -0.29
13 AT1G03610 Protein of unknown function (DUF789) 0.75 0.31 -0.34
14 AT5G63920 topoisomerase 3alpha AtTOP3alpha, topoisomerase 3alpha -0.75 0.34 -0.32
15 AT4G18530 Protein of unknown function (DUF707) 0.75 0.32 -0.3
16 AT1G67690 Zincin-like metalloproteases family protein -0.75 0.3 -0.31
17 AT1G63100 GRAS family transcription factor -0.74 0.32 -0.31
18 AT3G10985 senescence associated gene 20 ARABIDOPSIS THALIANA WOUND-INDUCED
PROTEIN 12, senescence associated
gene 20, WOUND-INDUCED PROTEIN 12		 0.74 0.33 -0.3
19 AT2G42410 zinc finger protein 11 ZINC FINGER PROTEIN 11, zinc
finger protein 11		 -0.74 0.33 -0.34
20 AT3G17360 phragmoplast orienting kinesin 1 phragmoplast orienting kinesin 1 -0.74 0.34 -0.3
21 AT3G27560 Protein kinase superfamily protein ATN1 0.74 0.29 -0.31
22 AT1G22280 phytochrome-associated protein phosphatase type 2C phytochrome-associated protein
phosphatase type 2C		 0.74 0.3 -0.3
23 AT1G21010 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 14 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G76600.1); Has 206 Blast hits to 206 proteins in
13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 206; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.73 0.29 -0.34
24 AT2G41580 transposable element gene 0.73 0.33 -0.32
25 AT2G29890 villin-like 1 ATVLN1, villin 1 -0.73 0.34 -0.32
26 AT1G43700 VIRE2-interacting protein 1 sulphate utilization efficiency 3,
VIRE2-interacting protein 1		 0.73 0.33 -0.32
27 AT4G18375 RNA-binding KH domain-containing protein -0.72 0.32 -0.3
28 AT4G34390 extra-large GTP-binding protein 2 extra-large GTP-binding protein 2 0.72 0.33 -0.31
29 AT4G38780 Pre-mRNA-processing-splicing factor -0.72 0.32 -0.32
30 AT3G51760 Protein of unknown function (DUF688) 0.72 0.33 -0.31
31 AT4G35480 RING-H2 finger A3B RING-H2 finger A3B 0.72 0.33 -0.3
32 AT3G03270 Adenine nucleotide alpha hydrolases-like superfamily
protein		 0.72 0.32 -0.33
33 AT4G13990 Exostosin family protein -0.72 0.32 -0.31
34 AT3G04880 DNA-damage-repair/toleration protein (DRT102) DNA-DAMAGE-REPAIR/TOLERATION 2 0.71 0.33 -0.33
35 AT3G02140 AFP2 (ABI five-binding protein 2) family protein ABI FIVE BINDING PROTEIN 4, TWO OR
MORE ABRES-CONTAINING GENE 2		 0.71 0.32 -0.31
36 AT3G10800 Basic-leucine zipper (bZIP) transcription factor family
protein		 BZIP28 0.71 0.3 -0.3
37 AT1G19300 Nucleotide-diphospho-sugar transferases superfamily protein ATGATL1,
GALACTURONOSYLTRANSFERASE-LIKE 1,
GAOLAOZHUANGREN 1, PARVUS		 0.71 0.32 -0.32
38 AT5G63540 Domain of unknown function (DUF1767) ATRMI1, BLAP75, RECQ MEDIATED
INSTABILITY 1		 -0.71 0.31 -0.31
39 AT5G44800 chromatin remodeling 4 chromatin remodeling 4, PICKLE
RELATED 1		 -0.71 0.31 -0.29
40 AT2G27120 DNA polymerase epsilon catalytic subunit POL2B, TILTED 2 -0.71 0.32 -0.32
41 AT3G61350 SKP1 interacting partner 4 SKP1 interacting partner 4 0.71 0.32 -0.31
42 AT5G50820 NAC domain containing protein 97 NAC domain containing protein 97,
NAC domain containing protein 97		 -0.71 0.33 -0.31
43 AT5G62520 similar to RCD one 5 similar to RCD one 5 0.7 0.32 -0.31
44 AT4G27470 RING membrane-anchor 3 ATRMA3, RING membrane-anchor 3 0.7 0.3 -0.32
45 AT5G08440 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 21 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G23490.1); Has 141 Blast
hits to 139 proteins in 35 species: Archae - 0; Bacteria -
9; Metazoa - 21; Fungi - 6; Plants - 94; Viruses - 0; Other
Eukaryotes - 11 (source: NCBI BLink).		 -0.7 0.32 -0.31
46 AT4G02170 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G38700.1); Has 53 Blast hits
to 53 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 53; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.7 0.31 -0.32
47 AT4G20060 ARM repeat superfamily protein EMBRYO DEFECTIVE 1895 -0.7 0.32 -0.3
48 AT3G23170 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G14450.1); Has 74 Blast hits
to 74 proteins in 6 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.7 0.31 -0.31
49 AT4G05590 CONTAINS InterPro DOMAIN/s: Uncharacterised protein family
UPF0041 (InterPro:IPR005336); BEST Arabidopsis thaliana
protein match is: Uncharacterised protein family (UPF0041)
(TAIR:AT4G22310.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 0.7 0.31 -0.31
50 AT4G24110 unknown protein; Has 76 Blast hits to 76 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0;
Plants - 75; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.7 0.32 -0.31
51 AT5G58840 Subtilase family protein 0.7 0.31 -0.32
52 AT2G41430 dehydration-induced protein (ERD15) CTC-Interacting Domain 1, EARLY
RESPONSIVE TO DEHYDRATION 15,
LIGHT STRESS-REGULATED 1		 0.7 0.34 -0.32
53 AT2G33700 Protein phosphatase 2C family protein 0.7 0.31 -0.31
54 AT5G01730 SCAR family protein 4 ATSCAR4, SCAR family protein 4,
WAVE3		 -0.69 0.3 -0.33
55 AT1G53840 pectin methylesterase 1 pectin methylesterase 1, pectin
methylesterase 1		 0.69 0.31 -0.33
56 AT2G22570 nicotinamidase 1 A. THALIANA NICOTINAMIDASE 1,
nicotinamidase 1		 0.69 0.3 -0.3
57 AT4G39910 ubiquitin-specific protease 3 ubiquitin-specific protease 3,
ubiquitin-specific protease 3		 0.69 0.31 -0.3
58 AT1G50450 Saccharopine dehydrogenase -0.69 0.34 -0.33
59 AT5G55820 CONTAINS InterPro DOMAIN/s: Inner centromere protein,
ARK-binding region (InterPro:IPR005635); Has 1807 Blast
hits to 1807 proteins in 277 species: Archae - 0; Bacteria
- 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 WYRD -0.68 0.29 -0.31
60 AT5G58680 ARM repeat superfamily protein 0.68 0.32 -0.32
61 AT5G08139 RING/U-box superfamily protein 0.68 0.31 -0.33
62 AT3G63220 Galactose oxidase/kelch repeat superfamily protein 0.68 0.31 -0.31
63 AT3G25950 TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing
protein		 -0.68 0.31 -0.32
64 AT1G54210 Ubiquitin-like superfamily protein AUTOPHAGY 12, ATATG12, AUTOPHAGY
12 A		 0.68 0.33 -0.3
65 AT3G02550 LOB domain-containing protein 41 LOB domain-containing protein 41 0.68 0.29 -0.33
66 AT1G33055 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: anaerobic respiration; LOCATED IN:
endomembrane system; EXPRESSED IN: 13 plant structures;
EXPRESSED DURING: 6 growth stages; Has 20 Blast hits to 20
proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.68 0.31 -0.31
67 AT5G02830 Tetratricopeptide repeat (TPR)-like superfamily protein -0.68 0.31 -0.28
68 AT3G16060 ATP binding microtubule motor family protein -0.68 0.33 -0.32
69 AT2G39560 Putative membrane lipoprotein -0.67 0.3 -0.31
70 AT5G37020 auxin response factor 8 auxin response factor 8, ATARF8 -0.67 0.3 -0.32
71 AT3G17100 sequence-specific DNA binding transcription factors 0.67 0.35 -0.31
72 AT3G18120 F-box associated ubiquitination effector family protein -0.67 0.3 -0.32
73 AT3G16740 F-box and associated interaction domains-containing protein 0.67 0.31 -0.3
74 AT3G10040 sequence-specific DNA binding transcription factors 0.67 0.29 -0.32
75 AT5G65460 kinesin like protein for actin based chloroplast movement 2 kinesin like protein for actin
based chloroplast movement 2,
kinesin CDKA ;1 associated 2		 -0.67 0.3 -0.31
76 AT1G28560 snRNA activating complex family protein SHOOT REDIFFERENTIATION DEFECTIVE
2		 -0.67 0.3 -0.31
77 AT5G04140 glutamate synthase 1 FERREDOXIN-DEPENDENT GLUTAMATE
SYNTHASE, FERREDOXIN-DEPENDENT
GLUTAMATE SYNTHASE 1, glutamate
synthase 1, GLUS		 -0.67 0.3 -0.33
78 AT1G79880 RNA recognition motif (RRM)-containing protein -0.67 0.34 -0.3
79 AT5G15780 Pollen Ole e 1 allergen and extensin family protein -0.67 0.32 -0.31
80 AT5G06710 homeobox from Arabidopsis thaliana homeobox from Arabidopsis thaliana -0.67 0.32 -0.33
81 AT1G11280 S-locus lectin protein kinase family protein -0.67 0.31 -0.29
82 AT3G56870 unknown protein; Has 204 Blast hits to 201 proteins in 58
species: Archae - 0; Bacteria - 10; Metazoa - 72; Fungi -
8; Plants - 41; Viruses - 0; Other Eukaryotes - 73 (source:
NCBI BLink).		 -0.67 0.32 -0.31
83 AT1G20270 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.67 0.31 -0.33
84 AT5G07630 lipid transporters -0.67 0.3 -0.32
85 AT5G15570 Bromodomain transcription factor -0.67 0.33 -0.34
86 AT3G46130 myb domain protein 48 myb domain protein 48, ATMYB48-1,
ATMYB48-2, ATMYB48-3, myb domain
protein 48		 -0.67 0.31 -0.32
87 AT3G53360 Tetratricopeptide repeat (TPR)-like superfamily protein -0.67 0.31 -0.33
88 AT2G19420 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.67 0.31 -0.31
89 AT3G02555 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G16110.1); Has 130 Blast hits
to 130 proteins in 18 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 130; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.67 0.31 -0.3
90 AT1G70620 cyclin-related -0.67 0.32 -0.31
91 AT1G79820 Major facilitator superfamily protein SUPPRESSOR OF G PROTEIN BETA1 -0.66 0.35 -0.3
92 AT2G47850 Zinc finger C-x8-C-x5-C-x3-H type family protein -0.66 0.3 -0.31
93 AT4G27550 trehalose-6-phosphatase synthase S4 ARABIDOPSIS THALIANA TREHALOSE
PHOSPHATASE/SYNTHASE 4,
trehalose-6-phosphatase synthase
S4		 -0.66 0.3 -0.3
94 AT1G27880 DEAD/DEAH box RNA helicase family protein -0.66 0.32 -0.32
95 AT5G38770 glutamine dumper 7 glutamine dumper 7, glutamine
dumper 7		 -0.66 0.32 -0.32
96 AT2G36720 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc
finger domain		 -0.65 0.31 -0.31
97 AT1G13050 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G26350.1); Has 538 Blast hits
to 510 proteins in 88 species: Archae - 0; Bacteria - 23;
Metazoa - 81; Fungi - 36; Plants - 361; Viruses - 8; Other
Eukaryotes - 29 (source: NCBI BLink).		 -0.65 0.31 -0.32
98 AT5G57590 adenosylmethionine-8-amino-7-oxononanoate transaminases biotin auxotroph 1 -0.65 0.33 -0.32
99 AT2G33820 Mitochondrial substrate carrier family protein ATMBAC1, MBAC1 -0.64 0.31 -0.31
100 AT3G56300 Cysteinyl-tRNA synthetase, class Ia family protein -0.64 0.32 -0.3
101 AT3G49740 Tetratricopeptide repeat (TPR)-like superfamily protein -0.64 0.32 -0.3
102 AT3G24150 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G32295.1); Has 50 Blast hits
to 50 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 7; Fungi - 0; Plants - 41; Viruses - 0; Other
Eukaryotes - 2 (source: NCBI BLink).		 -0.64 0.32 -0.34
103 AT2G47220 DOMAIN OF UNKNOWN FUNCTION 724 5 DOMAIN OF UNKNOWN FUNCTION 724 5,
DOMAIN OF UNKNOWN FUNCTION 724 5		 -0.64 0.32 -0.3
104 AT5G09860 nuclear matrix protein-related AtHPR1, AtTHO1, HPR1, THO1 -0.64 0.3 -0.33
105 AT2G18120 SHI-related sequence 4 SHI-related sequence 4 -0.64 0.31 -0.31
106 AT1G19060 Protein of unknown function (DUF626) -0.64 0.32 -0.32
107 AT4G23950 Galactose-binding protein -0.64 0.31 -0.33
108 AT1G80030 Molecular chaperone Hsp40/DnaJ family protein -0.64 0.32 -0.34