AT3G13490 : ARABIDOPSIS THALIANA LYSYL-TRNA SYNTHETASE 2
Query Information
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AGICode AT3G13490
Description Lysyl-tRNA synthetase, class II
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G13490 Lysyl-tRNA synthetase, class II ARABIDOPSIS THALIANA LYSYL-TRNA
SYNTHETASE 2, OVULE ABORTION 5		 1 0.31 -0.31
2 AT5G13120 cyclophilin 20-2 ARABIDOPSIS THALIANA CYCLOPHILIN
20-2, cyclophilin 20-2,
Photosynthetic NDH subcomplex L 5		 0.83 0.31 -0.31
3 AT1G08490 chloroplastic NIFS-like cysteine desulfurase ATCPNIFS, ATNFS2, ATSUFS,
chloroplastic NIFS-like cysteine
desulfurase, SUFS		 0.82 0.3 -0.3
4 AT2G36250 Tubulin/FtsZ family protein ATFTSZ2-1, FTSZ2-1 0.82 0.32 -0.31
5 AT2G44870 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 15 growth stages; Has 39 Blast hits to 39 proteins
in 18 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi
- 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.82 0.32 -0.31
6 AT2G42770 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein 0.81 0.3 -0.31
7 AT1G36320 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G37920.1); Has 93 Blast hits
to 90 proteins in 22 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 85; Viruses - 0; Other
Eukaryotes - 8 (source: NCBI BLink).		 0.81 0.29 -0.32
8 AT2G42130 Plastid-lipid associated protein PAP / fibrillin family
protein		 0.81 0.32 -0.32
9 AT5G49940 NIFU-like protein 2 CHLOROPLAST-LOCALIZED NIFU-LIKE
PROTEIN 2, NIFU-like protein 2		 0.8 0.32 -0.3
10 AT2G21170 triosephosphate isomerase PLASTID ISOFORM TRIOSE PHOSPHATE
ISOMERASE, triosephosphate
isomerase		 0.8 0.3 -0.29
11 AT2G38270 CAX-interacting protein 2 GLUTAREDOXIN, CAX-interacting
protein 2		 0.78 0.29 -0.32
12 AT1G12410 CLP protease proteolytic subunit 2 CLP protease proteolytic subunit
2, CLPR2, EMBRYO DEFECTIVE 3146,
NUCLEAR-ENCODED CLP PROTEASE P2		 0.78 0.33 -0.3
13 AT4G32590 2Fe-2S ferredoxin-like superfamily protein 0.77 0.31 -0.31
14 AT1G02560 nuclear encoded CLP protease 5 nuclear encoded CLP protease 5,
NUCLEAR-ENCODED CLPP 1, NUCLEAR
CLPP 5		 0.77 0.31 -0.3
15 AT3G16100 RAB GTPase homolog G3C ATRAB7D, RAB GTPase homolog G3C,
RAB GTPase homolog G3C		 0.77 0.31 -0.34
16 AT5G57850 D-aminoacid aminotransferase-like PLP-dependent enzymes
superfamily protein		 0.77 0.31 -0.31
17 AT4G31780 monogalactosyl diacylglycerol synthase 1 EMBRYO DEFECTIVE 2797,
monogalactosyl diacylglycerol
synthase 1,
MONOGALACTOSYLDIACYLGLYCEROL
SYNTHASE A, UDP-glycosyl
transferase 81A1		 0.76 0.33 -0.31
18 AT2G20270 Thioredoxin superfamily protein 0.76 0.3 -0.3
19 AT4G25370 Double Clp-N motif protein 0.76 0.34 -0.34
20 AT3G54690 Sugar isomerase (SIS) family protein SETH3 0.75 0.29 -0.31
21 AT1G22610 C2 calcium/lipid-binding plant phosphoribosyltransferase
family protein		 0.75 0.31 -0.33
22 AT1G32500 non-intrinsic ABC protein 6 ATP-binding cassette I7,
non-intrinsic ABC protein 6,
non-intrinsic ABC protein 6		 0.75 0.34 -0.34
23 AT4G12060 Double Clp-N motif protein 0.74 0.33 -0.31
24 AT3G13800 Metallo-hydrolase/oxidoreductase superfamily protein 0.74 0.33 -0.3
25 AT1G11750 CLP protease proteolytic subunit 6 CLP protease proteolytic subunit
6, NUCLEAR-ENCODED CLPP 1, NCLPP6		 0.74 0.32 -0.31
26 AT5G18430 GDSL-like Lipase/Acylhydrolase superfamily protein 0.73 0.34 -0.33
27 AT2G19940 oxidoreductases, acting on the aldehyde or oxo group of
donors, NAD or NADP as acceptor;copper ion binding		 0.73 0.33 -0.33
28 AT5G25360 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G32342.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.73 0.29 -0.32
29 AT3G50790 esterase/lipase/thioesterase family protein 0.73 0.3 -0.32
30 AT3G44540 fatty acid reductase 4 fatty acid reductase 4 -0.73 0.33 -0.32
31 AT3G15900 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; Has 26 Blast hits to 26 proteins
in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.72 0.32 -0.32
32 AT5G21040 F-box protein 2 F-box protein 2 0.72 0.3 -0.3
33 AT3G10670 non-intrinsic ABC protein 7 ATP-binding cassette I6,
non-intrinsic ABC protein 7,
non-intrinsic ABC protein 7		 0.71 0.35 -0.3
34 AT5G45390 CLP protease P4 CLP protease P4, NUCLEAR-ENCODED
CLP PROTEASE P4		 0.71 0.31 -0.32
35 AT1G11650 RNA-binding (RRM/RBD/RNP motifs) family protein ATRBP45B, RBP45B 0.71 0.32 -0.31
36 AT2G47070 squamosa promoter binding protein-like 1 squamosa promoter binding
protein-like 1		 0.71 0.34 -0.34
37 AT1G11570 NTF2-like NTF2-like 0.7 0.3 -0.33
38 AT1G63310 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G20362.1); Has 78 Blast hits
to 77 proteins in 11 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 78; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.7 0.3 -0.31
39 AT3G61130 galacturonosyltransferase 1 galacturonosyltransferase 1, LGT1 0.7 0.3 -0.3
40 AT3G13550 Ubiquitin-conjugating enzyme family protein CYTOKININ-INSENSITIVE 4,
CONSTITUTIVE PHOTOMORPHOGENIC 10,
EMBRYO DEFECTIVE 144, FUSCA 9		 0.7 0.33 -0.3
41 AT4G21860 methionine sulfoxide reductase B 2 methionine sulfoxide reductase B 2 0.7 0.32 -0.33
42 AT2G15290 translocon at inner membrane of chloroplasts 21 TRANSLOCON AT INNER MEMBRANE OF
CHLOROPLASTS 21, CHLOROPLAST
IMPORT APPARATUS 5, PERMEASE IN
CHLOROPLASTS 1, translocon at
inner membrane of chloroplasts 21		 0.7 0.31 -0.3
43 AT1G15370 SNARE-like superfamily protein 0.7 0.29 -0.34
44 AT4G14910 HISTIDINE BIOSYNTHESIS 5B HISTIDINE BIOSYNTHESIS 5B 0.69 0.32 -0.32
45 AT3G52230 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast outer membrane, chloroplast thylakoid membrane,
chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 13 growth stages; Has 29
Blast hits to 29 proteins in 12 species: Archae - 0;
Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 26; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.69 0.34 -0.31
46 AT2G20860 lipoic acid synthase 1 lipoic acid synthase 1 0.69 0.32 -0.3
47 AT2G18350 homeobox protein 24 homeobox protein 24, homeobox
protein 24, ZINC FINGER
HOMEODOMAIN 6		 0.69 0.31 -0.31
48 AT1G60780 Clathrin adaptor complexes medium subunit family protein HAPLESS 13 0.69 0.31 -0.31
49 AT1G06820 carotenoid isomerase CAROTENOID AND CHLOROPLAST
REGULATION 2, carotenoid isomerase		 0.69 0.31 -0.32
50 AT1G45170 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G42960.1); Has 62 Blast hits
to 62 proteins in 18 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 62; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.68 0.32 -0.31
51 AT3G09310 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF37 (InterPro:IPR002696); Has 5781 Blast
hits to 5781 proteins in 1903 species: Archae - 0; Bacteria
- 3956; Metazoa - 2; Fungi - 0; Plants - 42; Viruses - 3;
Other Eukaryotes - 1778 (source: NCBI BLink).		 0.68 0.31 -0.33
52 AT1G76670 Nucleotide-sugar transporter family protein 0.68 0.31 -0.32
53 AT5G64480 unknown protein; Has 35333 Blast hits to 34131 proteins in
2444 species: Archae - 798; Bacteria - 22429; Metazoa -
974; Fungi - 991; Plants - 531; Viruses - 0; Other
Eukaryotes - 9610 (source: NCBI BLink).		 0.68 0.32 -0.34
54 AT5G10460 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 0.68 0.32 -0.3
55 AT3G26550 Cysteine/Histidine-rich C1 domain family protein -0.67 0.3 -0.31
56 AT3G21310 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 0.67 0.29 -0.31
57 AT4G17300 Class II aminoacyl-tRNA and biotin synthetases superfamily
protein		 ATNS1, NS1, ovule abortion 8 0.67 0.32 -0.31
58 AT5G64850 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: plasma membrane;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: RPM1-interacting
protein 4, defence response (InterPro:IPR008700); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G09960.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 0.67 0.33 -0.31
59 AT1G55610 BRI1 like BRI1 like -0.67 0.29 -0.34
60 AT3G22990 ARM repeat superfamily protein LEAF AND FLOWER RELATED 0.66 0.32 -0.3
61 AT5G45380 solute:sodium symporters;urea transmembrane transporters ATDUR3, DEGRADATION OF UREA 3 -0.66 0.31 -0.3
62 AT3G62660 galacturonosyltransferase-like 7 galacturonosyltransferase-like 7 0.66 0.3 -0.3
63 AT3G06390 Uncharacterised protein family (UPF0497) -0.66 0.31 -0.29
64 AT1G10310 NAD(P)-binding Rossmann-fold superfamily protein 0.66 0.33 -0.3
65 AT4G04840 methionine sulfoxide reductase B6 methionine sulfoxide reductase B6,
methionine sulfoxide reductase B6		 0.66 0.32 -0.33
66 AT3G58550 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.65 0.32 -0.32
67 AT2G47810 nuclear factor Y, subunit B5 nuclear factor Y, subunit B5 -0.65 0.32 -0.32
68 AT3G15300 VQ motif-containing protein -0.64 0.32 -0.28
69 AT1G21740 Protein of unknown function (DUF630 and DUF632) -0.64 0.33 -0.29
70 AT5G65210 bZIP transcription factor family protein TGA1 -0.63 0.33 -0.3
71 AT1G78960 lupeol synthase 2 lupeol synthase 2, lupeol synthase
2		 -0.63 0.35 -0.3
72 AT2G41660 Protein of unknown function, DUF617 mizu-kussei 1 -0.63 0.32 -0.3
73 AT1G18880 Major facilitator superfamily protein nitrate transporter 1.9 -0.62 0.33 -0.31
74 AT2G32300 uclacyanin 1 uclacyanin 1 -0.62 0.34 -0.31
75 AT4G22770 AT hook motif DNA-binding family protein -0.61 0.32 -0.33
76 AT3G57260 beta-1,3-glucanase 2 AtPR2, BETA-1,3-GLUCANASE 2,
beta-1,3-glucanase 2,
PATHOGENESIS-RELATED PROTEIN 2,
PATHOGENESIS-RELATED PROTEIN 2		 -0.61 0.31 -0.3
77 AT3G22930 calmodulin-like 11 calmodulin-like 11 -0.6 0.33 -0.33
78 AT1G73780 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.6 0.31 -0.31
79 AT3G16030 lectin protein kinase family protein CALLUS EXPRESSION OF RBCS 101 -0.6 0.31 -0.31
80 AT5G49520 WRKY DNA-binding protein 48 ARABIDOPSIS THALIANA WRKY
DNA-BINDING PROTEIN 48, WRKY
DNA-binding protein 48		 -0.6 0.33 -0.34
81 AT4G36430 Peroxidase superfamily protein -0.6 0.31 -0.31
82 AT5G09530 hydroxyproline-rich glycoprotein family protein Pro-Glu-Leu|Ile|Val-Pro-Lys 1,
proline-rich protein 10		 -0.6 0.31 -0.32
83 AT1G34750 Protein phosphatase 2C family protein -0.6 0.34 -0.32
84 AT3G18400 NAC domain containing protein 58 NAC domain containing protein 58,
NAC domain containing protein 58		 -0.59 0.3 -0.32
85 AT3G14280 unknown protein; Has 51 Blast hits to 51 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 51; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.59 0.31 -0.33
86 AT5G65790 myb domain protein 68 MYB DOMAIN PROTEIN 68, myb domain
protein 68		 -0.59 0.31 -0.3
87 AT2G05910 Protein of unknown function (DUF567) -0.59 0.32 -0.31
88 AT2G25000 WRKY DNA-binding protein 60 ATWRKY60, WRKY DNA-binding protein
60		 -0.59 0.32 -0.31
89 AT1G24430 HXXXD-type acyl-transferase family protein -0.59 0.29 -0.31
90 AT5G09480 hydroxyproline-rich glycoprotein family protein -0.58 0.32 -0.32
91 AT5G45210 Disease resistance protein (TIR-NBS-LRR class) family -0.58 0.3 -0.32
92 AT2G25090 CBL-interacting protein kinase 16 CBL-interacting protein kinase 16,
SNF1-RELATED PROTEIN KINASE 3.18		 -0.57 0.32 -0.31
93 AT1G55430 Cysteine/Histidine-rich C1 domain family protein -0.57 0.33 -0.32
94 AT5G62120 response regulator 23 response regulator 23, response
regulator 23		 -0.57 0.33 -0.32
95 AT2G04480 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G35870.1); Has 38 Blast hits
to 38 proteins in 9 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.56 0.32 -0.32
96 AT3G10100 transposable element gene -0.55 0.31 -0.31
97 AT3G45530 Cysteine/Histidine-rich C1 domain family protein -0.55 0.31 -0.34
98 AT1G64620 Dof-type zinc finger DNA-binding family protein -0.54 0.31 -0.33
99 AT1G15790 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G15780.1); Has 170 Blast hits
to 94 proteins in 14 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 170; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.54 0.3 -0.32
100 AT2G38490 CBL-interacting protein kinase 22 CBL-interacting protein kinase 22,
SNF1-RELATED PROTEIN KINASE 3.19		 -0.54 0.31 -0.31
101 AT1G71690 Protein of unknown function (DUF579) -0.54 0.3 -0.31
102 AT5G59760 Protein of unknown function (DUF1635) -0.54 0.31 -0.31