AT3G13520 : arabinogalactan protein 12
Query Information
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AGICode AT3G13520
Description arabinogalactan protein 12
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G13520 arabinogalactan protein 12 arabinogalactan protein 12,
ATAGP12		 1 0.32 -0.31
2 AT1G64520 regulatory particle non-ATPase 12A regulatory particle non-ATPase 12A 0.84 0.31 -0.32
3 AT5G15490 UDP-glucose 6-dehydrogenase family protein UDP-glucose dehydrogenase 3 0.79 0.32 -0.33
4 AT4G34720 ATPase, F0/V0 complex, subunit C protein ATVHA-C1, AVA-P1, VACUOLAR
H+-PUMPING ATPASE C1		 0.78 0.31 -0.32
5 AT4G02080 secretion-associated RAS super family 2 ASAR1, secretion-associated RAS
super family 2, ATSARA1C,
secretion-associated RAS super
family 2		 0.78 0.3 -0.31
6 AT1G74640 alpha/beta-Hydrolases superfamily protein 0.78 0.33 -0.31
7 AT1G69570 Dof-type zinc finger DNA-binding family protein 0.78 0.32 -0.31
8 AT5G11740 arabinogalactan protein 15 arabinogalactan protein 15,
ATAGP15		 0.77 0.31 -0.32
9 AT5G59340 WUSCHEL related homeobox 2 WUSCHEL related homeobox 2 -0.77 0.32 -0.32
10 AT3G04500 RNA-binding (RRM/RBD/RNP motifs) family protein 0.77 0.29 -0.34
11 AT1G20575 Nucleotide-diphospho-sugar transferases superfamily protein dolichol phosphate mannose
synthase 1		 0.77 0.32 -0.3
12 AT1G23220 Dynein light chain type 1 family protein 0.76 0.31 -0.31
13 AT4G17170 RAB GTPase homolog B1C AT-RAB2, ARABIDOPSIS RAB GTPASE
HOMOLOG B1B, ATRAB2A, ATRABB1C,
RAB GTPASE HOMOLOG B1B, RAB2A, RAB
GTPase homolog B1C		 0.76 0.34 -0.32
14 AT2G38610 RNA-binding KH domain-containing protein 0.76 0.31 -0.3
15 AT1G20200 PAM domain (PCI/PINT associated module) protein EMBRYO DEFECTIVE 2719, HAPLESS 15 0.75 0.32 -0.31
16 AT3G09840 cell division cycle 48 ATCDC48, cell division cycle 48,
CDC48A		 0.75 0.33 -0.32
17 AT2G36300 Integral membrane Yip1 family protein 0.75 0.32 -0.31
18 AT1G70920 homeobox-leucine zipper protein 18 homeobox-leucine zipper protein
18, homeobox-leucine zipper
protein 18		 0.74 0.33 -0.32
19 AT2G47170 Ras-related small GTP-binding family protein ARF1A1C 0.74 0.3 -0.32
20 AT3G51780 BCL-2-associated athanogene 4 BCL-2-associated athanogene 4,
BCL-2-associated athanogene 4		 0.74 0.32 -0.31
21 AT3G15060 RAB GTPase homolog A1G RAB GTPase homolog A1G, RAB GTPase
homolog A1G		 0.74 0.3 -0.33
22 AT3G07090 PPPDE putative thiol peptidase family protein 0.73 0.33 -0.32
23 AT1G28250 unknown protein; Has 22 Blast hits to 22 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.73 0.32 -0.33
24 AT3G11850 Protein of unknown function, DUF593 0.73 0.31 -0.29
25 AT1G78300 general regulatory factor 2 14-3-3 PROTEIN G-BOX FACTOR14
OMEGA, GF14 OMEGA, general
regulatory factor 2		 0.73 0.3 -0.33
26 AT2G20850 STRUBBELIG-receptor family 1 STRUBBELIG-receptor family 1 -0.73 0.3 -0.32
27 AT5G20500 Glutaredoxin family protein 0.73 0.3 -0.31
28 AT4G10810 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G24026.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 0.73 0.33 -0.33
29 AT3G24350 syntaxin of plants 32 ATSYP32, syntaxin of plants 32 0.73 0.29 -0.32
30 AT1G09920 TRAF-type zinc finger-related 0.73 0.3 -0.32
31 AT1G43640 tubby like protein 5 tubby like protein 5, tubby like
protein 5		 0.72 0.28 -0.32
32 AT3G14430 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: response to oxidative stress; LOCATED IN:
mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; Has 16 Blast hits to 16 proteins
in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 16; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.72 0.3 -0.31
33 AT1G14000 VH1-interacting kinase VH1-interacting kinase 0.72 0.31 -0.31
34 AT1G21920 Histone H3 K4-specific methyltransferase SET7/9 family
protein		 -0.72 0.3 -0.31
35 AT1G59710 Protein of unknown function (DUF569) 0.72 0.31 -0.32
36 AT2G35700 ERF family protein 38 ERF FAMILY PROTEIN 38, ERF family
protein 38		 0.72 0.32 -0.32
37 AT3G10740 alpha-L-arabinofuranosidase 1 ALPHA-L-ARABINOFURANOSIDASE,
ALPHA-L-ARABINOFURANOSIDASE 1,
alpha-L-arabinofuranosidase 1,
ARABIDOPSIS THALIANA
ALPHA-L-ARABINOFURANOSIDASE 1		 -0.71 0.32 -0.32
38 AT1G63830 PLAC8 family protein 0.71 0.33 -0.31
39 AT3G55600 Membrane fusion protein Use1 0.71 0.31 -0.31
40 AT5G25760 peroxin4 peroxin4, ubiquitin-conjugating
enzyme 21		 0.71 0.32 -0.28
41 AT2G17380 associated protein 19 associated protein 19 0.71 0.33 -0.3
42 AT2G05000 transposable element gene -0.71 0.32 -0.31
43 AT3G46290 hercules receptor kinase 1 hercules receptor kinase 1 0.71 0.32 -0.3
44 AT5G03340 ATPase, AAA-type, CDC48 protein 0.71 0.33 -0.33
45 AT5G52200 phosphoprotein phosphatase inhibitors AtI-2, inhibitor-2 0.71 0.32 -0.33
46 AT5G59300 ubiquitin carrier protein 7 ARABIDOPSIS THALIANA UBIQUITIN
CARRIER PROTEIN 7, ubiquitin
carrier protein 7		 0.71 0.32 -0.3
47 AT1G59830 protein phosphatase 2A-2 protein phosphatase 2A-2 0.7 0.34 -0.33
48 AT1G11090 alpha/beta-Hydrolases superfamily protein 0.7 0.3 -0.33
49 AT4G37445 BEST Arabidopsis thaliana protein match is: Calcium-binding
EF hand family protein (TAIR:AT1G64850.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.7 0.34 -0.29
50 AT5G03520 RAB GTPase homolog 8C ARABIDOPSIS RAB HOMOLOG E1D, RAB
GTPase homolog 8C, ATRABE1D, RAB
HOMOLOG E1D, RAB GTPase homolog 8C		 0.7 0.32 -0.31
51 AT1G54720 early-responsive to dehydration protein-related / ERD
protein-related		 -0.7 0.32 -0.34
52 AT1G56450 20S proteasome beta subunit G1 20S proteasome beta subunit G1 0.7 0.32 -0.3
53 AT2G33220 GRIM-19 protein 0.7 0.3 -0.34
54 AT5G20090 Uncharacterised protein family (UPF0041) 0.7 0.31 -0.29
55 AT5G54750 Transport protein particle (TRAPP) component 0.7 0.33 -0.31
56 AT2G30930 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, plasma membrane, membrane; EXPRESSED IN: 24
plant structures; EXPRESSED DURING: 14 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G06540.1); Has 194 Blast hits to 176 proteins in
78 species: Archae - 0; Bacteria - 101; Metazoa - 15; Fungi
- 25; Plants - 12; Viruses - 4; Other Eukaryotes - 37
(source: NCBI BLink).		 0.69 0.31 -0.33
57 AT5G05820 Nucleotide-sugar transporter family protein 0.69 0.32 -0.3
58 AT4G03760 transposable element gene 0.69 0.28 -0.33
59 AT4G17310 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 9
plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage; BEST Arabidopsis thaliana protein match is: unknown
protein (TAIR:AT5G47455.7); Has 164 Blast hits to 164
proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 164; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.69 0.32 -0.32
60 AT5G58070 temperature-induced lipocalin TEMPERATURE-INDUCED LIPOCALIN,
temperature-induced lipocalin		 0.69 0.31 -0.33
61 AT1G34780 APR-like 4 APR-like 4, APR-like 4 0.69 0.3 -0.31
62 AT4G03480 Ankyrin repeat family protein 0.69 0.3 -0.32
63 AT2G26990 proteasome family protein ATCSN2, CONSTITUTIVE
PHOTOMORPHOGENIC 12, CSN2, FUSCA
12		 0.69 0.32 -0.33
64 AT5G67590 NADH-ubiquinone oxidoreductase-related FROSTBITE1 0.69 0.31 -0.29
65 AT4G07790 transposable element gene 0.69 0.31 -0.31
66 AT4G01710 ARP2/3 complex 16 kDa subunit (p16-Arc) ARPC5, CROOKED 0.69 0.32 -0.3
67 AT2G19830 SNF7 family protein SNF7.2, VPS32 0.69 0.32 -0.32
68 AT1G15370 SNARE-like superfamily protein 0.69 0.31 -0.31
69 AT3G14200 Chaperone DnaJ-domain superfamily protein 0.68 0.31 -0.31
70 AT4G29040 regulatory particle AAA-ATPase 2A regulatory particle AAA-ATPase 2A 0.68 0.31 -0.31
71 AT4G28770 Tetraspanin family protein 0.68 0.31 -0.3
72 AT3G43240 ARID/BRIGHT DNA-binding domain-containing protein 0.68 0.31 -0.32
73 AT5G58910 laccase 16 laccase 16 0.68 0.3 -0.3
74 AT1G36640 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: sperm cell, root; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G36622.1); Has 14 Blast hits to 14 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 14; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.68 0.32 -0.3
75 AT1G64700 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 17 plant
structures; EXPRESSED DURING: 11 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT3G61920.1); Has 48 Blast hits to 47 proteins in 7
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.68 0.33 -0.33
76 AT3G52740 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G44450.1); Has 65 Blast hits
to 65 proteins in 13 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 65; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.68 0.33 -0.33
77 AT3G26890 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G41110.1); Has 393 Blast hits
to 383 proteins in 134 species: Archae - 0; Bacteria - 61;
Metazoa - 171; Fungi - 74; Plants - 80; Viruses - 0; Other
Eukaryotes - 7 (source: NCBI BLink).		 -0.68 0.31 -0.33
78 AT1G69640 sphingoid base hydroxylase 1 sphingoid base hydroxylase 1 0.68 0.33 -0.31
79 AT2G23200 Protein kinase superfamily protein -0.68 0.3 -0.31
80 AT5G01960 RING/U-box superfamily protein 0.68 0.32 -0.31
81 AT1G73970 unknown protein; Has 34 Blast hits to 33 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 32; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 -0.67 0.33 -0.28
82 AT2G03890 phosphoinositide 4-kinase gamma 7 phosphoinositide 4-kinase gamma 7,
phosphoinositide 4-kinase gamma 7,
UBIQUITIN-LIKE DOMAIN KINASE GAMMA
7		 -0.67 0.32 -0.34
83 AT3G23930 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: hypocotyl; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G13540.1); Has 10639 Blast hits to 7432 proteins
in 646 species: Archae - 82; Bacteria - 826; Metazoa -
5047; Fungi - 759; Plants - 314; Viruses - 86; Other
Eukaryotes - 3525 (source: NCBI BLink).		 -0.66 0.29 -0.3
84 AT5G13670 nodulin MtN21 /EamA-like transporter family protein -0.66 0.29 -0.33
85 AT3G20810 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 Jumonji C domain-containing
protein 30, jumonji domain
containing 5		 -0.66 0.31 -0.3
86 AT3G58770 unknown protein; Has 38 Blast hits to 36 proteins in 11
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2;
Plants - 32; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 -0.66 0.32 -0.32
87 AT2G21630 Sec23/Sec24 protein transport family protein -0.66 0.3 -0.32
88 AT3G12950 Trypsin family protein -0.65 0.3 -0.32
89 AT4G25880 pumilio 6 pumilio 6, pumilio 6 -0.65 0.33 -0.31
90 AT1G19060 Protein of unknown function (DUF626) -0.65 0.31 -0.3
91 AT1G75730 unknown protein; Has 327 Blast hits to 272 proteins in 89
species: Archae - 0; Bacteria - 129; Metazoa - 68; Fungi -
14; Plants - 20; Viruses - 0; Other Eukaryotes - 96
(source: NCBI BLink).		 -0.65 0.32 -0.31
92 AT2G45100 Cyclin/Brf1-like TBP-binding protein -0.65 0.32 -0.32
93 AT2G25270 unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN:
18 plant structures; EXPRESSED DURING: 13 growth stages;
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT2G12400.1); Has 35333 Blast hits to 34131 proteins
in 2444 species: Archae - 798; Bacteria - 22429; Metazoa -
974; Fungi - 991; Plants - 531; Viruses - 0; Other
Eukaryotes - 9610 (source: NCBI BLink).		 -0.64 0.3 -0.3
94 AT1G57943 purine permease 17 purine permease 17, purine
permease 17		 -0.64 0.31 -0.33
95 AT2G07490 transposable element gene -0.64 0.34 -0.32
96 AT2G28680 RmlC-like cupins superfamily protein -0.63 0.3 -0.35
97 AT1G23610 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G23640.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.63 0.34 -0.31
98 AT2G45620 Nucleotidyltransferase family protein -0.63 0.3 -0.31
99 AT5G40470 RNI-like superfamily protein -0.63 0.33 -0.29
100 AT5G10880 tRNA synthetase-related / tRNA ligase-related -0.63 0.33 -0.31
101 AT5G14620 domains rearranged methyltransferase 2 DMT7, domains rearranged
methyltransferase 2		 -0.63 0.31 -0.32
102 AT3G51590 lipid transfer protein 12 lipid transfer protein 12 -0.62 0.3 -0.31
103 AT3G62330 Zinc knuckle (CCHC-type) family protein -0.61 0.31 -0.31
104 AT2G35170 Histone H3 K4-specific methyltransferase SET7/9 family
protein		 -0.61 0.31 -0.31
105 AT1G29790 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.61 0.31 -0.32
106 AT1G31310 hydroxyproline-rich glycoprotein family protein -0.61 0.29 -0.32
107 AT5G55900 Sucrase/ferredoxin-like family protein -0.6 0.32 -0.29
108 AT2G03260 EXS (ERD1/XPR1/SYG1) family protein -0.6 0.31 -0.32
109 AT3G45440 Concanavalin A-like lectin protein kinase family protein -0.6 0.32 -0.32
110 AT1G10210 mitogen-activated protein kinase 1 mitogen-activated protein kinase
1, mitogen-activated protein
kinase 1		 -0.6 0.29 -0.31
111 AT2G19250 pseudogene, similar to Magnesium-chelatase subunit chlD,
chloroplast precursor (Mg- protoporphyrin IX chelatase)
(Mg-chelatase subunit D). (Common tobacco), similar to
SP|O24133 Magnesium-chelatase subunit chlD, chloroplast
precursor (Mg-protoporphyrin IX chelatase) (Mg-chelatase
subunit D) {Nicotiana tabacum}; blastp match of 78%
identity and 5.0e-07 P-value to SP|O24133|CHLD_TOBAC
Magnesium-chelatase subunit chlD, chloroplast precursor
(Mg- protoporphyrin IX chelatase) (Mg-chelatase subunit D).
(Common tobacco) {Nicotiana tabacum}		 -0.6 0.3 -0.32
112 AT4G17080 Histone H3 K4-specific methyltransferase SET7/9 family
protein		 -0.59 0.32 -0.31
113 AT1G31030 transposable element gene -0.59 0.31 -0.31
114 AT5G66960 Prolyl oligopeptidase family protein -0.59 0.29 -0.32
115 AT3G56380 response regulator 17 response regulator 17, response
regulator 17		 -0.59 0.32 -0.31
116 AT2G12300 transposable element gene -0.58 0.31 -0.31
117 AT2G41620 Nucleoporin interacting component (Nup93/Nic96-like) family
protein		 -0.58 0.33 -0.34
118 AT5G41320 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.58 0.31 -0.31
119 AT1G74600 pentatricopeptide (PPR) repeat-containing protein organelle transcript processing 87 -0.58 0.29 -0.3
120 AT1G77760 nitrate reductase 1 GNR1, nitrate reductase 1, NITRATE
REDUCTASE 1		 -0.58 0.31 -0.3
121 AT5G62120 response regulator 23 response regulator 23, response
regulator 23		 -0.58 0.31 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
122 C0028 3-Aminopiperidin-2-one (R,S)-3-Aminopiperidin-2-one - - -0.66 0.3 -0.31