AGICode | AT3G28590 |
Description | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G79170.1); Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT3G28590 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G79170.1); Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
1 | 0.33 | -0.3 | |||
2 | AT1G21720 | proteasome beta subunit C1 | proteasome beta subunit C1 | -0.76 | 0.32 | -0.32 | ||
3 | AT5G25940 | early nodulin-related | -0.74 | 0.33 | -0.32 | |||
4 | AT5G45550 | Mob1/phocein family protein | MOB1-like | -0.74 | 0.32 | -0.33 | ||
5 | AT2G44100 | guanosine nucleotide diphosphate dissociation inhibitor 1 | AT-GDI1, guanosine nucleotide diphosphate dissociation inhibitor 1, guanosine nucleotide diphosphate dissociation inhibitor 1 |
-0.73 | 0.29 | -0.31 | ||
6 | AT1G01570 | Protein of unknown function (DUF604) | 0.73 | 0.33 | -0.3 | |||
7 | AT5G40660 | ATP12 protein-related | -0.72 | 0.31 | -0.32 | |||
8 | AT2G20900 | diacylglycerol kinase 5 | ATDGK5, diacylglycerol kinase 5 | -0.71 | 0.34 | -0.31 | ||
9 | AT5G35080 | INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mannose-6-phosphate receptor, binding (InterPro:IPR009011), Glucosidase II beta subunit-like (InterPro:IPR012913); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.7 | 0.28 | -0.34 | |||
10 | AT3G09810 | isocitrate dehydrogenase VI | isocitrate dehydrogenase VI | -0.7 | 0.33 | -0.32 | ||
11 | AT2G04900 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF423 (InterPro:IPR006696); Has 1824 Blast hits to 1824 proteins in 878 species: Archae - 0; Bacteria - 1498; Metazoa - 118; Fungi - 14; Plants - 58; Viruses - 0; Other Eukaryotes - 136 (source: NCBI BLink). |
-0.7 | 0.31 | -0.31 | |||
12 | AT5G37600 | glutamine synthase clone R1 | ARABIDOPSIS GLUTAMINE SYNTHASE 1;1, ARABIDOPSIS THALIANA GLUTAMINE SYNTHASE CLONE R1, GLUTAMINE SYNTHASE 1;1, glutamine synthase clone R1 |
-0.69 | 0.33 | -0.31 | ||
13 | AT3G19970 | alpha/beta-Hydrolases superfamily protein | -0.69 | 0.32 | -0.31 | |||
14 | AT1G14990 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 34 Blast hits to 34 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.69 | 0.3 | -0.31 | |||
15 | AT1G44760 | Adenine nucleotide alpha hydrolases-like superfamily protein |
0.69 | 0.32 | -0.32 | |||
16 | AT5G59840 | Ras-related small GTP-binding family protein | -0.68 | 0.31 | -0.3 | |||
17 | AT4G24190 | Chaperone protein htpG family protein | HEAT SHOCK PROTEIN 90-7, HEAT SHOCK PROTEIN 90.7, HEAT SHOCK PROTEIN 90.7, SHEPHERD |
-0.68 | 0.31 | -0.3 | ||
18 | AT4G24820 | 26S proteasome, regulatory subunit Rpn7;Proteasome component (PCI) domain |
-0.68 | 0.33 | -0.31 | |||
19 | AT2G37550 | ARF-GAP domain 7 | ARF-GAP domain 7, yeast pde1 suppressor 1 |
-0.67 | 0.33 | -0.33 | ||
20 | AT5G50850 | Transketolase family protein | MACCI-BOU | -0.67 | 0.3 | -0.32 | ||
21 | AT2G31090 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G20562.1); Has 70 Blast hits to 70 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.67 | 0.31 | -0.32 | |||
22 | AT3G17910 | Surfeit locus 1 cytochrome c oxidase biogenesis protein | EMBRYO DEFECTIVE 3121, SURFEIT 1 | -0.67 | 0.29 | -0.31 | ||
23 | AT4G15900 | pleiotropic regulatory locus 1 | pleiotropic regulatory locus 1 | -0.67 | 0.31 | -0.31 | ||
24 | AT3G26670 | Protein of unknown function (DUF803) | -0.67 | 0.32 | -0.35 | |||
25 | AT4G38420 | SKU5 similar 9 | SKU5 similar 9 | -0.66 | 0.32 | -0.33 | ||
26 | AT1G71530 | Protein kinase superfamily protein | -0.66 | 0.32 | -0.31 | |||
27 | AT2G32970 | unknown protein; Has 158 Blast hits to 154 proteins in 73 species: Archae - 0; Bacteria - 61; Metazoa - 0; Fungi - 0; Plants - 55; Viruses - 28; Other Eukaryotes - 14 (source: NCBI BLink). |
0.66 | 0.32 | -0.32 | |||
28 | AT3G13930 | Dihydrolipoamide acetyltransferase, long form protein | -0.66 | 0.32 | -0.32 | |||
29 | AT5G61240 | Leucine-rich repeat (LRR) family protein | -0.65 | 0.32 | -0.33 | |||
30 | AT5G27530 | Pectin lyase-like superfamily protein | 0.65 | 0.31 | -0.34 | |||
31 | AT2G20760 | Clathrin light chain protein | -0.65 | 0.31 | -0.28 | |||
32 | AT3G13870 | Root hair defective 3 GTP-binding protein (RHD3) | GOLGI MUTANT 8, ROOT HAIR DEFECTIVE 3 |
-0.64 | 0.32 | -0.32 | ||
33 | AT1G30630 | Coatomer epsilon subunit | -0.64 | 0.33 | -0.31 | |||
34 | AT5G46230 | Protein of unknown function, DUF538 | -0.64 | 0.3 | -0.31 | |||
35 | AT1G71860 | protein tyrosine phosphatase 1 | ATPTP1, protein tyrosine phosphatase 1 |
-0.64 | 0.32 | -0.31 | ||
36 | AT1G51070 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
basic Helix-Loop-Helix 115 | -0.64 | 0.33 | -0.32 | ||
37 | AT1G08370 | decapping 1 | ATDCP1, decapping 1 | -0.63 | 0.31 | -0.33 | ||
38 | AT1G54200 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13980.1); Has 1084 Blast hits to 581 proteins in 136 species: Archae - 0; Bacteria - 72; Metazoa - 212; Fungi - 78; Plants - 102; Viruses - 0; Other Eukaryotes - 620 (source: NCBI BLink). |
0.63 | 0.34 | -0.33 | |||
39 | AT2G24080 | Protein of unknown function (DUF295) | -0.63 | 0.31 | -0.32 | |||
40 | AT2G27020 | 20S proteasome alpha subunit G1 | 20S proteasome alpha subunit G1 | -0.63 | 0.33 | -0.31 | ||
41 | AT2G47960 | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF974 (InterPro:IPR010378); Has 285 Blast hits to 284 proteins in 126 species: Archae - 0; Bacteria - 0; Metazoa - 150; Fungi - 68; Plants - 32; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). |
-0.63 | 0.31 | -0.3 | |||
42 | AT2G19880 | Nucleotide-diphospho-sugar transferases superfamily protein | -0.62 | 0.29 | -0.31 | |||
43 | AT2G40730 | Protein kinase family protein with ARM repeat domain | cytoplasmic tRNA export protein | -0.62 | 0.32 | -0.31 | ||
44 | AT1G24350 | Acid phosphatase/vanadium-dependent haloperoxidase-related protein |
-0.62 | 0.32 | -0.3 | |||
45 | AT4G14800 | 20S proteasome beta subunit D2 | 20S proteasome beta subunit D2 | -0.62 | 0.31 | -0.3 | ||
46 | AT5G58240 | FRAGILE HISTIDINE TRIAD | FRAGILE HISTIDINE TRIAD | -0.62 | 0.31 | -0.32 | ||
47 | AT5G64130 | cAMP-regulated phosphoprotein 19-related protein | -0.62 | 0.31 | -0.31 | |||
48 | AT1G77440 | 20S proteasome beta subunit C2 | 20S proteasome beta subunit C2 | -0.62 | 0.3 | -0.34 | ||
49 | AT1G64380 | Integrase-type DNA-binding superfamily protein | 0.62 | 0.3 | -0.33 | |||
50 | AT1G31640 | AGAMOUS-like 92 | AGAMOUS-like 92 | 0.62 | 0.33 | -0.32 | ||
51 | AT5G48740 | Leucine-rich repeat protein kinase family protein | 0.61 | 0.31 | -0.32 | |||
52 | AT5G41280 | Receptor-like protein kinase-related family protein | 0.61 | 0.32 | -0.31 | |||
53 | AT3G58460 | RHOMBOID-like protein 15 | RHOMBOID-like protein 15, RHOMBOID-like protein 15 |
-0.61 | 0.31 | -0.31 | ||
54 | AT3G57780 | BEST Arabidopsis thaliana protein match is: nucleolar protein gar2-related (TAIR:AT2G42320.2); Has 3163 Blast hits to 2460 proteins in 357 species: Archae - 16; Bacteria - 291; Metazoa - 841; Fungi - 335; Plants - 248; Viruses - 72; Other Eukaryotes - 1360 (source: NCBI BLink). |
0.61 | 0.32 | -0.31 | |||
55 | AT4G39880 | Ribosomal protein L23/L15e family protein | -0.61 | 0.32 | -0.31 | |||
56 | AT3G20800 | Cell differentiation, Rcd1-like protein | -0.61 | 0.31 | -0.33 | |||
57 | AT3G60820 | N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein |
PBF1 | -0.61 | 0.33 | -0.32 | ||
58 | AT4G13340 | Leucine-rich repeat (LRR) family protein | leucine-rich repeat/extensin 3 | -0.61 | 0.33 | -0.31 | ||
59 | AT4G27530 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G53895.1); Has 14 Blast hits to 14 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 14; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.6 | 0.34 | -0.3 | |||
60 | AT1G35370 | transposable element gene | 0.6 | 0.31 | -0.31 | |||
61 | AT5G47130 | Bax inhibitor-1 family protein | 0.6 | 0.32 | -0.32 | |||
62 | AT5G07500 | Zinc finger C-x8-C-x5-C-x3-H type family protein | PEI1 | 0.6 | 0.32 | -0.32 | ||
63 | AT1G53160 | squamosa promoter binding protein-like 4 | squamosa promoter binding protein-like 4 |
0.6 | 0.31 | -0.32 | ||
64 | AT1G67340 | HCP-like superfamily protein with MYND-type zinc finger | 0.6 | 0.33 | -0.32 | |||
65 | AT1G18670 | Protein kinase superfamily protein | IMPAIRED IN BABA-INDUCED STERILITY 1 |
0.6 | 0.34 | -0.3 | ||
66 | AT1G60160 | Potassium transporter family protein | 0.59 | 0.31 | -0.32 | |||
67 | AT5G59430 | telomeric repeat binding protein 1 | TELOMERE REPEAT BINDING PROTEIN 1, telomeric repeat binding protein 1 |
0.58 | 0.32 | -0.33 | ||
68 | AT1G67790 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01680.1); Has 208 Blast hits to 125 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 208; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.58 | 0.34 | -0.32 | |||
69 | AT3G42630 | Pentatricopeptide repeat (PPR) superfamily protein | 0.58 | 0.32 | -0.31 | |||
70 | AT1G10380 | Putative membrane lipoprotein | 0.57 | 0.31 | -0.32 | |||
71 | AT2G14590 | transposable element gene | 0.57 | 0.32 | -0.32 | |||
72 | AT4G04165 | transposable element gene | 0.57 | 0.31 | -0.31 |