AT3G14080 : -
Query Information
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AGICode AT3G14080
Description Small nuclear ribonucleoprotein family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G14080 Small nuclear ribonucleoprotein family protein 1 0.31 -0.33
2 AT4G09550 AtGCP3 interacting protein 1 ARABIDOPSIS ATGCP3 INTERACTING
PROTEIN 1, AtGCP3 interacting
protein 1		 0.83 0.31 -0.32
3 AT3G43810 calmodulin 7 calmodulin 7 0.82 0.3 -0.32
4 AT3G20250 pumilio 5 pumilio 5, pumilio 5 -0.81 0.31 -0.29
5 AT1G03080 kinase interacting (KIP1-like) family protein -0.81 0.32 -0.3
6 AT3G55350 PIF / Ping-Pong family of plant transposases 0.8 0.33 -0.32
7 AT5G51960 CONTAINS InterPro DOMAIN/s: Complex 1 LYR protein
(InterPro:IPR008011); Has 45 Blast hits to 45 proteins in
14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 45; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.8 0.33 -0.33
8 AT2G30410 tubulin folding cofactor A (KIESEL) KIESEL, TUBULIN FOLDING FACTOR A 0.8 0.3 -0.35
9 AT4G26840 small ubiquitin-like modifier 1 ARABIDOPSIS THALIANA SMALL
UBIQUITIN-LIKE MODIFIER 1, SMALL
UBIQUITIN-LIKE MODIFIER 1, SMALL
UBIQUITIN-LIKE MODIFIER 1, small
ubiquitin-like modifier 1		 0.8 0.32 -0.3
10 AT3G62590 alpha/beta-Hydrolases superfamily protein -0.8 0.31 -0.31
11 AT4G15790 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 13 growth stages; Has 411 Blast hits to
380 proteins in 121 species: Archae - 4; Bacteria - 107;
Metazoa - 85; Fungi - 29; Plants - 59; Viruses - 0; Other
Eukaryotes - 127 (source: NCBI BLink).		 0.79 0.31 -0.32
12 AT2G03350 Protein of unknown function, DUF538 0.79 0.33 -0.3
13 AT3G11420 Protein of unknown function (DUF604) -0.79 0.33 -0.31
14 AT1G48370 YELLOW STRIPE like 8 YELLOW STRIPE like 8 -0.78 0.3 -0.31
15 AT5G15770 glucose-6-phosphate acetyltransferase 1 glucose-6-phosphate
acetyltransferase 1,
glucose-6-phosphate
acetyltransferase 1		 0.78 0.33 -0.33
16 AT5G23550 Got1/Sft2-like vescicle transport protein family 0.78 0.29 -0.32
17 AT1G24360 NAD(P)-binding Rossmann-fold superfamily protein 0.77 0.3 -0.33
18 AT1G65580 Endonuclease/exonuclease/phosphatase family protein FRAGILE FIBER3 -0.77 0.29 -0.32
19 AT2G47580 spliceosomal protein U1A spliceosomal protein U1A 0.77 0.32 -0.32
20 AT3G44380 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 0.77 0.3 -0.3
21 AT2G01260 Protein of unknown function (DUF789) 0.77 0.31 -0.3
22 AT3G46940 DUTP-PYROPHOSPHATASE-LIKE 1 DUTP-PYROPHOSPHATASE-LIKE 1 0.77 0.29 -0.3
23 AT4G28570 Long-chain fatty alcohol dehydrogenase family protein -0.77 0.31 -0.31
24 AT5G25080 Sas10/Utp3/C1D family 0.77 0.33 -0.3
25 AT2G35190 novel plant snare 11 ATNPSN11, novel plant snare 11,
NSPN11		 0.77 0.31 -0.32
26 AT1G76300 snRNP core protein SMD3 snRNP core protein SMD3 0.76 0.33 -0.3
27 AT5G16680 RING/FYVE/PHD zinc finger superfamily protein -0.76 0.29 -0.31
28 AT5G50170 C2 calcium/lipid-binding and GRAM domain containing protein -0.76 0.3 -0.31
29 AT2G22010 related to KPC1 related to KPC1 -0.75 0.35 -0.33
30 AT4G25260 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 0.75 0.32 -0.32
31 AT4G16800 ATP-dependent caseinolytic (Clp) protease/crotonase family
protein		 0.75 0.34 -0.29
32 AT4G37280 MRG family protein 0.75 0.33 -0.31
33 AT3G20290 EPS15 homology domain 1 EPS15 homology domain 1, EPS15
homology domain 1		 -0.75 0.31 -0.3
34 AT3G25040 endoplasmic reticulum retention defective 2B endoplasmic reticulum retention
defective 2B		 0.75 0.3 -0.32
35 AT3G07274 unknown pseudogene -0.75 0.33 -0.33
36 AT1G47200 WPP domain protein 2 WPP domain protein 2 0.75 0.33 -0.3
37 AT5G24650 Mitochondrial import inner membrane translocase subunit
Tim17/Tim22/Tim23 family protein		 0.74 0.3 -0.32
38 AT5G63670 SPT4 homolog 2 SPT4 homolog 2 0.74 0.32 -0.32
39 AT3G48425 DNAse I-like superfamily protein 0.74 0.3 -0.33
40 AT5G15350 early nodulin-like protein 17 AtENODL17, early nodulin-like
protein 17		 0.74 0.32 -0.33
41 AT2G41600 Mitochondrial glycoprotein family protein 0.74 0.31 -0.33
42 AT1G29400 MEI2-like protein 5 MEI2-like protein 5, MEI2-like
protein 5		 -0.74 0.32 -0.31
43 AT5G49010 DNA replication protein-related EMBRYO DEFECTIVE 2812, SYNTHETIC
LETHALITY WITH DPB11-1 5		 0.74 0.32 -0.31
44 AT5G44020 HAD superfamily, subfamily IIIB acid phosphatase 0.74 0.3 -0.32
45 AT1G05430 unknown protein; Has 31 Blast hits to 31 proteins in 9
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 31; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.74 0.31 -0.31
46 AT3G62840 Small nuclear ribonucleoprotein family protein 0.74 0.31 -0.3
47 AT5G40340 Tudor/PWWP/MBT superfamily protein -0.73 0.33 -0.32
48 AT1G15780 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G10440.1); Has 103701 Blast
hits to 43153 proteins in 1828 species: Archae - 30;
Bacteria - 7385; Metazoa - 38639; Fungi - 11531; Plants -
7727; Viruses - 307; Other Eukaryotes - 38082 (source: NCBI
BLink).		 -0.73 0.32 -0.31
49 AT2G22010 related to KPC1 related to KPC1 -0.73 0.31 -0.3
50 AT1G09815 polymerase delta 4 polymerase delta 4 0.73 0.32 -0.31
51 AT1G10630 ADP-ribosylation factor A1F ADP-ribosylation factor A1F,
ADP-ribosylation factor A1F		 0.73 0.31 -0.31
52 AT4G00810 60S acidic ribosomal protein family 0.73 0.3 -0.33
53 AT5G37890 Protein with RING/U-box and TRAF-like domains 0.72 0.29 -0.32
54 AT1G33811 GDSL-like Lipase/Acylhydrolase superfamily protein 0.72 0.32 -0.29
55 AT1G70310 spermidine synthase 2 spermidine synthase 2 0.72 0.3 -0.33
56 AT4G32620 Enhancer of polycomb-like transcription factor protein -0.72 0.32 -0.31
57 AT3G30250 transposable element gene 0.72 0.32 -0.33
58 AT5G27490 Integral membrane Yip1 family protein 0.72 0.34 -0.34
59 AT4G38600 HEAT repeat ;HECT-domain (ubiquitin-transferase) KAKTUS, UBIQUITIN-PROTEIN LIGASE 3 -0.72 0.31 -0.32
60 AT5G63140 purple acid phosphatase 29 purple acid phosphatase 29, PAP29,
purple acid phosphatase 29		 0.72 0.33 -0.3
61 AT1G59560 E3 Ubiquitin ligase family protein DIAP1-like protein 2, ZCF61 0.72 0.3 -0.32
62 AT4G36420 Ribosomal protein L12 family protein 0.71 0.29 -0.31
63 AT3G09850 D111/G-patch domain-containing protein -0.71 0.32 -0.3
64 AT1G36510 Nucleic acid-binding proteins superfamily -0.71 0.32 -0.31
65 AT2G19430 DWD (DDB1-binding WD40 protein) hypersensitive to ABA 1 AtTHO6, DWD (DDB1-binding WD40
protein) hypersensitive to ABA 1,
THO6		 0.71 0.33 -0.31
66 AT5G04210 CCCH-type zinc fingerfamily protein with RNA-binding domain 0.71 0.31 -0.31
67 AT5G64650 Ribosomal protein L17 family protein 0.71 0.32 -0.33
68 AT4G35790 phospholipase D delta ARABIDOPSIS THALIANA PHOSPHOLIPASE
D DELTA, phospholipase D delta		 -0.71 0.3 -0.31
69 AT1G23480 cellulose synthase-like A3 cellulose synthase-like A3,
ATCSLA3, CSLA03, cellulose
synthase-like A3, CELLULOSE
SYNTHASE-LIKE A3		 0.71 0.32 -0.3
70 AT1G04120 multidrug resistance-associated protein 5 ATP-binding cassette C5,
Arabidopsis thaliana ATP-binding
cassette C5, multidrug
resistance-associated protein 5,
MULTIDRUG RESISTANCE PROTEIN 5,
multidrug resistance-associated
protein 5		 -0.71 0.33 -0.32
71 AT5G62980 Dihydroneopterin aldolase FOLB2 0.71 0.31 -0.3
72 AT4G18460 D-Tyr-tRNA(Tyr) deacylase family protein 0.71 0.31 -0.31
73 AT2G22260 oxidoreductase, 2OG-Fe(II) oxygenase family protein 0.71 0.29 -0.3
74 AT3G55000 tonneau family protein TONNEAU 1, TONNEAU 1A 0.71 0.3 -0.31
75 AT1G69360 Plant protein of unknown function (DUF863) -0.71 0.3 -0.29
76 AT3G27870 ATPase E1-E2 type family protein / haloacid
dehalogenase-like hydrolase family protein		 -0.71 0.32 -0.31
77 AT2G26600 Glycosyl hydrolase superfamily protein -0.7 0.31 -0.3
78 AT1G24460 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 14 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G31570.1); Has 181008 Blast hits to 85359 proteins
in 3551 species: Archae - 3290; Bacteria - 48304; Metazoa -
70793; Fungi - 13943; Plants - 10118; Viruses - 785; Other
Eukaryotes - 33775 (source: NCBI BLink).		 TGN-localized SYP41 interacting
protein		 -0.7 0.3 -0.31
79 AT2G45570 cytochrome P450, family 76, subfamily C, polypeptide 2 cytochrome P450, family 76,
subfamily C, polypeptide 2		 -0.69 0.32 -0.32
80 AT1G78610 mechanosensitive channel of small conductance-like 6 mechanosensitive channel of small
conductance-like 6		 -0.69 0.31 -0.32
81 AT1G10050 glycosyl hydrolase family 10 protein / carbohydrate-binding
domain-containing protein		 -0.69 0.31 -0.33
82 AT1G79270 evolutionarily conserved C-terminal region 8 evolutionarily conserved
C-terminal region 8		 -0.69 0.31 -0.29
83 AT5G07330 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT1G63060.1); Has 1807 Blast hits to
1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.69 0.32 -0.34
84 AT3G23870 Protein of unknown function (DUF803) -0.68 0.32 -0.33
85 AT1G32750 HAC13 protein (HAC13) GTD1, HISTONE ACETYLTRANSFERASE OF
THE CBP FAMILY 13, HAF01, HISTONE
ACETYLTRANSFERASE OF THE TAFII250
FAMILY 1, TBP-ASSOCIATED FACTOR 1		 -0.68 0.32 -0.31
86 AT2G46240 BCL-2-associated athanogene 6 ARABIDOPSIS THALIANA
BCL-2-ASSOCIATED ATHANOGENE 6,
BCL-2-associated athanogene 6		 -0.68 0.3 -0.31
87 AT2G25140 casein lytic proteinase B4 CASEIN LYTIC PROTEINASE B-M,
casein lytic proteinase B4, HEAT
SHOCK PROTEIN 98.7		 -0.68 0.3 -0.31
88 AT4G25970 phosphatidylserine decarboxylase 3 phosphatidylserine decarboxylase 3 -0.68 0.33 -0.3
89 AT1G10480 zinc finger protein 5 zinc finger protein 5 -0.67 0.29 -0.31
90 AT1G31480 shoot gravitropism 2 (SGR2) SHOOT GRAVITROPISM 2 -0.67 0.34 -0.34
91 AT2G35300 Late embryogenesis abundant protein, group 1 protein late embryogenesis abundant 4-2,
late embryogenesis abundant 18,
late embryogenesis abundant 4-2		 -0.67 0.35 -0.31
92 AT1G77280 Protein kinase protein with adenine nucleotide alpha
hydrolases-like domain		 -0.67 0.33 -0.31
93 AT2G21820 unknown protein; Has 45 Blast hits to 45 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 45; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.67 0.31 -0.31
94 AT1G80820 cinnamoyl coa reductase ATCCR2, cinnamoyl coa reductase -0.67 0.32 -0.32
95 ATMG01360 cytochrome oxidase cytochrome oxidase -0.67 0.32 -0.29
96 AT2G23110 Late embryogenesis abundant protein, group 6 -0.67 0.34 -0.3
97 AT1G26450 Carbohydrate-binding X8 domain superfamily protein -0.66 0.32 -0.32
98 AT1G03790 Zinc finger C-x8-C-x5-C-x3-H type family protein SOMNUS -0.66 0.32 -0.31
99 AT3G11910 ubiquitin-specific protease 13 AtUBP13, ubiquitin-specific
protease 13		 -0.66 0.32 -0.32
100 AT1G75790 SKU5 similar 18 SKU5 similar 18 -0.66 0.31 -0.3
101 AT3G59770 sacI homology domain-containing protein / WW
domain-containing protein		 ARABIDOPSIS THALIANA SUPPRESSOR OF
ACTIN 9, SUPPRESSOR OF ACTIN 9		 -0.66 0.31 -0.31
102 AT4G26180 Mitochondrial substrate carrier family protein -0.66 0.33 -0.32
103 AT1G18160 Protein kinase superfamily protein -0.66 0.32 -0.31
104 AT5G55390 ENHANCED DOWNY MILDEW 2 ENHANCED DOWNY MILDEW 2 -0.65 0.31 -0.33
105 AT5G11700 LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: glycine-rich protein
(TAIR:AT4G32920.3); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.65 0.33 -0.31
106 AT1G58230 binding -0.65 0.33 -0.3
107 AT5G65240 Leucine-rich repeat protein kinase family protein -0.65 0.29 -0.33
108 AT2G25730 unknown protein; Has 157 Blast hits to 144 proteins in 62
species: Archae - 0; Bacteria - 0; Metazoa - 101; Fungi -
0; Plants - 35; Viruses - 0; Other Eukaryotes - 21 (source:
NCBI BLink).		 -0.65 0.32 -0.3
109 AT2G36960 TSL-kinase interacting protein 1 TSL-kinase interacting protein 1 -0.65 0.3 -0.33
110 AT5G24350 CONTAINS InterPro DOMAIN/s: Secretory pathway Sec39
(InterPro:IPR013244); Has 1807 Blast hits to 1807 proteins
in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736;
Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes -
339 (source: NCBI BLink).		 -0.64 0.3 -0.34
111 AT2G39030 Acyl-CoA N-acyltransferases (NAT) superfamily protein N-acetyltransferase activity 1 -0.64 0.31 -0.33
112 AT5G06510 nuclear factor Y, subunit A10 nuclear factor Y, subunit A10 -0.64 0.31 -0.31
113 AT1G05380 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc
finger protein		 -0.64 0.29 -0.34
114 AT1G02080 transcription regulators -0.64 0.32 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
115 C0017 sn-Glycero-3-phosphocholine sn-Glycero-3-phosphocholine L-1-Glycero-3-phosphocholine - -0.79 0.45 -0.42 C0017
116 C0258 Tryptophan amide (NH3+) D,L-Tryptophan amide (NH3+) - - -0.78 0.43 -0.43
117 C0136 Lactic acid D,L-Lactic acid Lactate pyruvate fermentation to lactate 0.76 0.46 -0.43 C0136
118 C0257 Tryptophan L-Tryptophan L-Tryptophan glucosinolate biosynthesis from tryptophan,
IAA biosynthesis I,
tryptophan biosynthesis,
camalexin biosynthesis,
tRNA charging 		-0.72 0.3 -0.35 C0257
119 C0105 Glutathione disulfide - Glutathione disulfide sulfate reduction II (assimilatory),
selenate reduction,
glutathione redox reactions I,
ascorbate glutathione cycle,
glutathione redox reactions II 		-0.7 0.44 -0.45 C0105
120 C0052 Adenosine - Adenosine adenine and adenosine salvage VI,
S-adenosyl-L-methionine cycle II,
cytokinins degradation,
methionine degradation I (to homocysteine),
adenine and adenosine salvage II 		-0.66 0.33 -0.31 C0052