AGICode | AT3G14110 |
Description | Tetratricopeptide repeat (TPR)-like superfamily protein |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT3G14110 | Tetratricopeptide repeat (TPR)-like superfamily protein | FLUORESCENT IN BLUE LIGHT | 1 | 0.34 | -0.31 | ||
2 | AT1G48350 | Ribosomal L18p/L5e family protein | EMBRYO DEFECTIVE 3105 | 0.92 | 0.31 | -0.32 | ||
3 | AT3G13120 | Ribosomal protein S10p/S20e family protein | 0.92 | 0.32 | -0.31 | |||
4 | AT2G35500 | shikimate kinase like 2 | shikimate kinase-like 2 | 0.91 | 0.32 | -0.32 | ||
5 | AT5G11480 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
0.91 | 0.31 | -0.32 | |||
6 | AT3G48730 | glutamate-1-semialdehyde 2,1-aminomutase 2 | glutamate-1-semialdehyde 2,1-aminomutase 2 |
0.91 | 0.34 | -0.31 | ||
7 | AT1G07320 | ribosomal protein L4 | EMBRYO DEFECTIVE 2784, ribosomal protein L4 |
0.91 | 0.32 | -0.33 | ||
8 | AT1G05190 | Ribosomal protein L6 family | embryo defective 2394 | 0.91 | 0.32 | -0.31 | ||
9 | AT3G45050 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 26 Blast hits to 26 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.91 | 0.33 | -0.34 | |||
10 | AT5G52960 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3143 (InterPro:IPR021489); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.9 | 0.34 | -0.31 | |||
11 | AT5G58250 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2488 (InterPro:IPR019616); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
EMBRYO DEFECTIVE 3143 | 0.9 | 0.31 | -0.32 | ||
12 | AT5G47190 | Ribosomal protein L19 family protein | 0.9 | 0.32 | -0.33 | |||
13 | AT1G01080 | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.9 | 0.3 | -0.29 | |||
14 | AT3G60370 | FKBP-like peptidyl-prolyl cis-trans isomerase family protein |
0.9 | 0.3 | -0.3 | |||
15 | AT1G02280 | translocon at the outer envelope membrane of chloroplasts 33 |
ATTOC33, PLASTID PROTEIN IMPORT 1, translocon at the outer envelope membrane of chloroplasts 33 |
0.9 | 0.31 | -0.31 | ||
16 | AT1G75350 | Ribosomal protein L31 | embryo defective 2184 | 0.9 | 0.31 | -0.32 | ||
17 | AT5G14320 | Ribosomal protein S13/S18 family | EMBRYO DEFECTIVE 3137 | 0.9 | 0.31 | -0.31 | ||
18 | AT2G26930 | 4-(cytidine 5'-phospho)-2-C-methyl-D-erithritol kinase | 4-(cytidine 5'-phospho)-2-C-methyl-D-erithrito l kinase, 4-(cytidine 5'-phospho)-2-C-methyl-D-erithrito l kinase, 4-(cytidine 5′-diphospho)-2-C-methyl-d-e rythritol kinase, 4-(cytidine 5′-diphospho)-2-C-methyl-d-e rythritol kinase, ISPE, PIGMENT DEFECTIVE 277 |
0.9 | 0.32 | -0.31 | ||
19 | AT4G30620 | Uncharacterised BCR, YbaB family COG0718 | 0.9 | 0.32 | -0.3 | |||
20 | AT1G64510 | Translation elongation factor EF1B/ribosomal protein S6 family protein |
0.9 | 0.31 | -0.33 | |||
21 | AT1G32990 | plastid ribosomal protein l11 | plastid ribosomal protein l11 | 0.89 | 0.33 | -0.31 | ||
22 | AT3G06730 | Thioredoxin z | thioredoxin putative plastidic, Thioredoxin z |
0.89 | 0.31 | -0.3 | ||
23 | AT1G03475 | Coproporphyrinogen III oxidase | ATCPO-I, HEMF1, LESION INITIATION 2 |
0.89 | 0.31 | -0.3 | ||
24 | AT2G40490 | Uroporphyrinogen decarboxylase | HEME2 | 0.89 | 0.31 | -0.32 | ||
25 | AT4G17560 | Ribosomal protein L19 family protein | 0.89 | 0.31 | -0.33 | |||
26 | AT5G57170 | Tautomerase/MIF superfamily protein | 0.89 | 0.33 | -0.31 | |||
27 | AT3G14930 | Uroporphyrinogen decarboxylase | HEME1 | 0.89 | 0.3 | -0.3 | ||
28 | AT4G15510 | Photosystem II reaction center PsbP family protein | 0.89 | 0.33 | -0.31 | |||
29 | AT4G24930 | thylakoid lumenal 17.9 kDa protein, chloroplast | 0.89 | 0.33 | -0.31 | |||
30 | AT4G27600 | pfkB-like carbohydrate kinase family protein | GENES NECESSARY FOR THE ACHIEVEMENT OF RUBISCO ACCUMULATION 5 |
0.88 | 0.31 | -0.32 | ||
31 | AT2G33450 | Ribosomal L28 family | 0.88 | 0.3 | -0.31 | |||
32 | AT1G33040 | nascent polypeptide-associated complex subunit alpha-like protein 5 |
nascent polypeptide-associated complex subunit alpha-like protein 5 |
0.88 | 0.3 | -0.3 | ||
33 | AT1G73110 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
0.88 | 0.32 | -0.34 | |||
34 | AT4G28210 | embryo defective 1923 | embryo defective 1923 | 0.88 | 0.32 | -0.33 | ||
35 | AT2G22230 | Thioesterase superfamily protein | 0.88 | 0.31 | -0.31 | |||
36 | AT4G34290 | SWIB/MDM2 domain superfamily protein | 0.87 | 0.32 | -0.32 | |||
37 | AT1G67700 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 49 Blast hits to 49 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). |
0.87 | 0.31 | -0.3 | |||
38 | AT1G76405 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G20816.1); Has 38 Blast hits to 38 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.87 | 0.32 | -0.31 | |||
39 | AT1G17650 | glyoxylate reductase 2 | glyoxylate reductase 2, GLYOXYLATE REDUCTASE 2 |
0.87 | 0.33 | -0.3 | ||
40 | AT3G05600 | alpha/beta-Hydrolases superfamily protein | 0.87 | 0.33 | -0.32 | |||
41 | AT4G24770 | 31-kDa RNA binding protein | ARABIDOPSIS THALIANA RNA BINDING PROTEIN, APPROXIMATELY 31 KD, ATRBP33, CP31, 31-kDa RNA binding protein |
0.87 | 0.31 | -0.33 | ||
42 | AT3G53900 | uracil phosphoribosyltransferase | PYRIMIDINE R, uracil phosphoribosyltransferase |
0.87 | 0.31 | -0.31 | ||
43 | AT5G10160 | Thioesterase superfamily protein | 0.87 | 0.29 | -0.32 | |||
44 | AT4G39620 | Tetratricopeptide repeat (TPR)-like superfamily protein | A. THALIANA PENTATRICOPEPTIDE REPEAT 5, EMBRYO DEFECTIVE 2453 |
0.87 | 0.31 | -0.34 | ||
45 | AT2G30200 | catalytics;transferases;[acyl-carrier-protein] S-malonyltransferases;binding |
EMBRYO DEFECTIVE 3147 | 0.86 | 0.3 | -0.33 | ||
46 | AT2G48070 | resistance to phytophthora 1 | RESISTANCE TO PHYTOPHTHORA 1 | 0.86 | 0.31 | -0.3 | ||
47 | AT5G20040 | isopentenyltransferase 9 | ARABIDOPSIS THALIANA ISOPENTENYLTRANSFERASE 9, isopentenyltransferase 9 |
0.86 | 0.32 | -0.32 | ||
48 | AT1G69740 | Aldolase superfamily protein | HEMB1 | 0.86 | 0.31 | -0.29 | ||
49 | AT1G36390 | Co-chaperone GrpE family protein | 0.86 | 0.32 | -0.32 | |||
50 | AT1G26570 | UDP-glucose dehydrogenase 1 | UDP-GLUCOSE DEHYDROGENASE 1, UDP-glucose dehydrogenase 1 |
0.86 | 0.32 | -0.3 | ||
51 | AT5G63570 | glutamate-1-semialdehyde-2,1-aminomutase | glutamate-1-semialdehyde-2,1-amino mutase |
0.86 | 0.3 | -0.33 | ||
52 | AT1G11430 | plastid developmental protein DAG, putative | 0.86 | 0.31 | -0.32 | |||
53 | AT1G62780 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; Has 94 Blast hits to 94 proteins in 35 species: Archae - 6; Bacteria - 10; Metazoa - 21; Fungi - 2; Plants - 48; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). |
0.86 | 0.31 | -0.31 | |||
54 | AT1G53800 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G53250.1); Has 1136 Blast hits to 882 proteins in 242 species: Archae - 2; Bacteria - 216; Metazoa - 257; Fungi - 77; Plants - 87; Viruses - 4; Other Eukaryotes - 493 (source: NCBI BLink). |
0.86 | 0.31 | -0.31 | |||
55 | AT4G34190 | stress enhanced protein 1 | stress enhanced protein 1 | 0.86 | 0.32 | -0.31 | ||
56 | AT5G51100 | Fe superoxide dismutase 2 | Fe superoxide dismutase 2 | 0.86 | 0.32 | -0.32 | ||
57 | AT1G11850 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; Has 38777 Blast hits to 8185 proteins in 741 species: Archae - 46; Bacteria - 14846; Metazoa - 13013; Fungi - 1392; Plants - 5894; Viruses - 543; Other Eukaryotes - 3043 (source: NCBI BLink). |
0.85 | 0.33 | -0.31 | |||
58 | AT1G22700 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.85 | 0.31 | -0.35 | |||
59 | AT1G10522 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 24 Blast hits to 24 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.85 | 0.33 | -0.32 | |||
60 | AT2G43560 | FKBP-like peptidyl-prolyl cis-trans isomerase family protein |
0.85 | 0.32 | -0.32 | |||
61 | AT3G62030 | rotamase CYP 4 | cyclophilin 20-3, rotamase CYP 4 | 0.85 | 0.31 | -0.3 | ||
62 | AT1G17200 | Uncharacterised protein family (UPF0497) | 0.85 | 0.31 | -0.31 | |||
63 | AT3G18680 | Amino acid kinase family protein | 0.85 | 0.3 | -0.32 | |||
64 | AT3G25860 | 2-oxoacid dehydrogenases acyltransferase family protein | LTA2, PLASTID E2 SUBUNIT OF PYRUVATE DECARBOXYLASE |
0.85 | 0.31 | -0.32 | ||
65 | AT4G13220 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 27 Blast hits to 27 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.85 | 0.31 | -0.32 | |||
66 | AT2G28930 | protein kinase 1B | protein kinase 1B, protein kinase 1B |
0.85 | 0.32 | -0.3 | ||
67 | AT5G20630 | germin 3 | ARABIDOPSIS THALIANA GERMIN 3, germin 3, GERMIN-LIKE PROTEIN 3, GLP3A, GLP3B |
0.85 | 0.33 | -0.32 | ||
68 | AT3G51140 | Protein of unknown function (DUF3353) | 0.85 | 0.31 | -0.31 | |||
69 | AT3G16340 | pleiotropic drug resistance 1 | ATP-binding cassette G29, PLEIOTROPIC DRUG RESISTANCE 1, pleiotropic drug resistance 1 |
-0.82 | 0.32 | -0.32 | ||
70 | AT2G42890 | MEI2-like 2 | MEI2-like 2, MEI2-like 2 | -0.82 | 0.34 | -0.3 | ||
71 | AT1G63440 | heavy metal atpase 5 | heavy metal atpase 5 | -0.81 | 0.33 | -0.33 | ||
72 | AT2G41220 | glutamate synthase 2 | glutamate synthase 2 | -0.81 | 0.32 | -0.29 | ||
73 | AT5G66170 | sulfurtransferase 18 | sulfurtransferase 18 | -0.81 | 0.35 | -0.33 | ||
74 | AT2G39350 | ABC-2 type transporter family protein | ATP-binding cassette G1 | -0.79 | 0.3 | -0.3 | ||
75 | AT1G20490 | AMP-dependent synthetase and ligase family protein | -0.78 | 0.33 | -0.29 | |||
76 | AT3G20250 | pumilio 5 | pumilio 5, pumilio 5 | -0.78 | 0.32 | -0.32 | ||
77 | AT5G16680 | RING/FYVE/PHD zinc finger superfamily protein | -0.78 | 0.32 | -0.32 | |||
78 | AT2G41850 | polygalacturonase abscission zone A. thaliana | ARABIDOPSIS DEHISCENCE ZONE POLYGALACTURONASE 2, polygalacturonase abscission zone A. thaliana |
-0.76 | 0.3 | -0.3 | ||
79 | AT5G24090 | chitinase A | chitinase A, chitinase A | -0.76 | 0.32 | -0.34 | ||
80 | AT5G19450 | calcium-dependent protein kinase 19 | calcium-dependent protein kinase 19, CPK8 |
-0.75 | 0.31 | -0.31 | ||
81 | AT3G01100 | hypothetical protein 1 | ARABIDOPSIS THALIANA HYPOTHETICAL PROTEIN 1, hypothetical protein 1 |
-0.75 | 0.3 | -0.32 | ||
82 | AT2G16720 | myb domain protein 7 | ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 7, ATY49, myb domain protein 7 |
-0.75 | 0.33 | -0.34 | ||
83 | AT1G77000 | RNI-like superfamily protein | ARABIDOPSIS HOMOLOG OF HOMOLOG OF HUMAN SKP2 2, SKP2B |
-0.74 | 0.31 | -0.28 | ||
84 | AT4G14010 | ralf-like 32 | ralf-like 32 | -0.74 | 0.3 | -0.33 | ||
85 | AT1G69480 | EXS (ERD1/XPR1/SYG1) family protein | -0.74 | 0.32 | -0.31 | |||
86 | AT1G10480 | zinc finger protein 5 | zinc finger protein 5 | -0.73 | 0.33 | -0.29 | ||
87 | AT1G30270 | CBL-interacting protein kinase 23 | ATCIPK23, CBL-interacting protein kinase 23, LOW-K+-SENSITIVE 1, SOS2-like protein kinase 17, SNF1-RELATED PROTEIN KINASE 3.23 |
-0.73 | 0.32 | -0.35 | ||
88 | AT5G67340 | ARM repeat superfamily protein | -0.71 | 0.34 | -0.31 | |||
89 | AT4G11670 | Protein of unknown function (DUF810) | -0.71 | 0.32 | -0.32 | |||
90 | AT1G10050 | glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein |
-0.71 | 0.31 | -0.32 | |||
91 | AT1G18160 | Protein kinase superfamily protein | -0.71 | 0.31 | -0.33 | |||
92 | AT1G69526 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
-0.71 | 0.32 | -0.28 | |||
93 | AT3G21240 | 4-coumarate:CoA ligase 2 | 4-coumarate:CoA ligase 2, AT4CL2 | -0.7 | 0.31 | -0.32 | ||
94 | AT2G16790 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
-0.7 | 0.3 | -0.33 | |||
95 | AT3G10320 | Glycosyltransferase family 61 protein | -0.7 | 0.34 | -0.31 | |||
96 | AT1G59740 | Major facilitator superfamily protein | -0.69 | 0.31 | -0.29 | |||
97 | AT1G77280 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain |
-0.68 | 0.31 | -0.34 | |||
98 | AT2G25940 | alpha-vacuolar processing enzyme | alpha-vacuolar processing enzyme, ALPHAVPE |
-0.68 | 0.32 | -0.31 | ||
99 | AT1G23230 | CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med23 (InterPro:IPR021629); Has 187 Blast hits to 184 proteins in 67 species: Archae - 0; Bacteria - 0; Metazoa - 135; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). |
-0.68 | 0.3 | -0.33 |