AT3G28680 : -
Query Information
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AGICode AT3G28680
Description Serine carboxypeptidase S28 family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G28680 Serine carboxypeptidase S28 family protein 1 0.3 -0.32
2 AT1G11440 BEST Arabidopsis thaliana protein match is: glycine-rich
protein (TAIR:AT3G29075.1); Has 19337 Blast hits to 8589
proteins in 488 species: Archae - 26; Bacteria - 641;
Metazoa - 7852; Fungi - 2167; Plants - 955; Viruses - 616;
Other Eukaryotes - 7080 (source: NCBI BLink).		 0.67 0.31 -0.3
3 AT4G18550 alpha/beta-Hydrolases superfamily protein Arabidopsis thaliana DAD1-like
seeding establishment-related
lipase, DAD1-like seeding
establishment-related lipase		 -0.67 0.32 -0.3
4 AT3G11050 ferritin 2 ferritin 2, ferritin 2 -0.65 0.33 -0.32
5 AT5G20560 Glycosyl hydrolase superfamily protein 0.64 0.31 -0.33
6 AT2G47260 WRKY DNA-binding protein 23 WRKY DNA-BINDING PROTEIN 23, WRKY
DNA-binding protein 23		 -0.64 0.32 -0.31
7 AT5G14860 UDP-Glycosyltransferase superfamily protein 0.63 0.34 -0.33
8 AT2G45680 TCP family transcription factor 0.63 0.32 -0.31
9 AT1G65910 NAC domain containing protein 28 NAC domain containing protein 28,
NAC domain containing protein 28		 0.63 0.3 -0.3
10 AT2G18360 alpha/beta-Hydrolases superfamily protein -0.62 0.31 -0.32
11 AT4G08150 KNOTTED-like from Arabidopsis thaliana BREVIPEDICELLUS, BREVIPEDICELLUS
1, KNOTTED-like from Arabidopsis
thaliana		 -0.61 0.3 -0.36
12 AT3G18400 NAC domain containing protein 58 NAC domain containing protein 58,
NAC domain containing protein 58		 -0.61 0.3 -0.31
13 AT2G43550 Scorpion toxin-like knottin superfamily protein 0.61 0.31 -0.32
14 AT1G23010 Cupredoxin superfamily protein Low Phosphate Root1 -0.61 0.32 -0.32
15 AT1G79430 Homeodomain-like superfamily protein ALTERED PHLOEM DEVELOPMENT, WOODY 0.61 0.3 -0.31
16 AT5G03390 Protein of unknown function (DUF295) 0.6 0.34 -0.32
17 AT4G36870 BEL1-like homeodomain 2 BEL1-like homeodomain 2, SAWTOOTH
1		 0.6 0.31 -0.3
18 AT5G41410 POX (plant homeobox) family protein BELL 1 0.59 0.31 -0.31
19 AT5G57810 tetraspanin15 tetraspanin15 -0.59 0.31 -0.33
20 AT5G22870 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 0.59 0.31 -0.32
21 AT2G03830 Encodes a root meristem growth factor (RGF). Belongs to a
family of functionally redundant homologous peptides that
are secreted, tyrosine-sulfated, and expressed mainly in
the stem cell area and the innermost layer of central
columella cells. RGFs are required for maintenance of the
root stem cell niche and transit amplifying cell
proliferation. Members of this family include: At5g60810
(RGF1), At1g13620 (RGF2), At2g04025 (RGF3), At3g30350
(RGF4), At5g51451 (RGF5), At4g16515 (RGF6), At3g02240
(RGF7), At2g03830 (RGF8) and At5g64770 (RGF9).		 root meristem growth factor 8 -0.59 0.3 -0.3
22 AT1G69780 Homeobox-leucine zipper protein family ATHB13 0.59 0.29 -0.33
23 AT4G08590 ORTHRUS-like ORTH-LIKE 1, ORTHRUS-LIKE 1,
ORTHRUS-like, VARIANT IN
METHYLATION 6		 -0.59 0.3 -0.32
24 AT2G14690 Glycosyl hydrolase superfamily protein 0.59 0.32 -0.32
25 AT2G45420 LOB domain-containing protein 18 LOB domain-containing protein 18 -0.58 0.31 -0.32
26 AT4G36260 Lateral root primordium (LRP) protein-related SHI RELATED SEQUENCE 2, STYLISH 2 -0.58 0.31 -0.32
27 AT2G46850 Protein kinase superfamily protein -0.58 0.32 -0.29
28 AT1G35030 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G34910.1); Has 7 Blast
hits to 7 proteins in 1 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 7; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.58 0.3 -0.34
29 AT5G50260 Cysteine proteinases superfamily protein cysteine endopeptidase 1 -0.58 0.32 -0.31
30 AT1G47990 gibberellin 2-oxidase 4 Arabidopsis thaliana gibberellin
2-oxidase 4, gibberellin 2-oxidase
4		 -0.58 0.32 -0.31
31 AT5G66950 Pyridoxal phosphate (PLP)-dependent transferases
superfamily protein		 0.57 0.3 -0.33
32 AT2G46750 D-arabinono-1,4-lactone oxidase family protein -0.57 0.32 -0.31
33 AT4G13660 pinoresinol reductase 2 ATPRR2, pinoresinol reductase 2 -0.57 0.3 -0.31
34 AT2G24190 NAD(P)-binding Rossmann-fold superfamily protein short-chain
dehydrogenase/reductase 2		 -0.56 0.31 -0.32
35 AT1G22760 poly(A) binding protein 3 poly(A) binding protein 3 0.56 0.31 -0.3
36 AT1G53430 Leucine-rich repeat transmembrane protein kinase 0.56 0.31 -0.34
37 AT1G74110 cytochrome P450, family 78, subfamily A, polypeptide 10 cytochrome P450, family 78,
subfamily A, polypeptide 10		 -0.56 0.32 -0.32
38 AT1G55440 Cysteine/Histidine-rich C1 domain family protein -0.56 0.33 -0.3
39 AT3G61380 Phosphatidylinositol N-acetyglucosaminlytransferase subunit
P-related		 0.55 0.31 -0.3
40 AT2G33880 homeobox-3 homeobox-3, STIMPY,
WUSCHEL-RELATED HOMEOBOX 9,
WUSCHEL related homeobox 9A		 0.55 0.32 -0.3
41 AT1G79910 Regulator of Vps4 activity in the MVB pathway protein 0.55 0.3 -0.29
42 AT5G65790 myb domain protein 68 MYB DOMAIN PROTEIN 68, myb domain
protein 68		 -0.55 0.32 -0.33
43 AT2G36590 proline transporter 3 PROLINE TRANSPORTER 3, proline
transporter 3		 0.54 0.32 -0.31
44 AT2G19060 SGNH hydrolase-type esterase superfamily protein 0.54 0.3 -0.31
45 AT2G02360 phloem protein 2-B10 phloem protein 2-B10, phloem
protein 2-B10		 0.54 0.31 -0.34
46 AT4G22600 unknown protein; Has 26 Blast hits to 26 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.54 0.32 -0.3
47 AT1G10810 NAD(P)-linked oxidoreductase superfamily protein 0.54 0.32 -0.31
48 AT3G62100 indole-3-acetic acid inducible 30 indole-3-acetic acid inducible 30 -0.53 0.31 -0.31
49 AT1G05540 Protein of unknown function (DUF295) 0.53 0.32 -0.29
50 AT4G07660 transposable element gene 0.53 0.33 -0.33
51 AT1G77740 phosphatidylinositol-4-phosphate 5-kinase 2 phosphatidylinositol-4-phosphate
5-kinase 2		 0.53 0.31 -0.28
52 AT1G19540 NmrA-like negative transcriptional regulator family protein -0.53 0.3 -0.33
53 AT4G37820 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G22795.1); Has 433572 Blast
hits to 177005 proteins in 4263 species: Archae - 2016;
Bacteria - 67591; Metazoa - 157995; Fungi - 49745; Plants -
22011; Viruses - 2192; Other Eukaryotes - 132022 (source:
NCBI BLink).		 0.53 0.32 -0.32
54 AT2G04760 transposable element gene -0.53 0.32 -0.3
55 AT2G18780 F-box and associated interaction domains-containing protein -0.52 0.3 -0.32
56 AT1G11170 Protein of unknown function (DUF707) -0.52 0.32 -0.34
57 AT3G03090 vacuolar glucose transporter 1 vacuolar glucose transporter 1,
vacuolar glucose transporter 1		 0.52 0.32 -0.33
58 AT5G46840 RNA-binding (RRM/RBD/RNP motifs) family protein -0.52 0.3 -0.31
59 AT3G19470 F-box and associated interaction domains-containing protein -0.51 0.3 -0.32
60 AT2G44800 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.51 0.33 -0.32
61 AT2G01100 unknown protein; Has 19420 Blast hits to 10641 proteins in
779 species: Archae - 0; Bacteria - 1003; Metazoa - 10257;
Fungi - 1826; Plants - 1570; Viruses - 56; Other Eukaryotes
- 4708 (source: NCBI BLink).		 -0.51 0.3 -0.3
62 AT5G47370 Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein HAT2 -0.51 0.32 -0.31
63 AT2G07660 transposable element gene 0.51 0.33 -0.32
64 AT2G02680 Cysteine/Histidine-rich C1 domain family protein -0.5 0.3 -0.31
65 AT2G24430 NAC domain containing protein 38 NAC domain containing protein 38,
Arabidopsis NAC domain containing
protein 39, NAC domain containing
protein 38		 -0.49 0.33 -0.31
66 AT1G21140 Vacuolar iron transporter (VIT) family protein -0.49 0.3 -0.3
67 AT1G11400 partner of Y14-MAGO partner of Y14-MAGO -0.49 0.31 -0.32
68 AT4G34870 rotamase cyclophilin 5 ARABIDOPSIS THALIANA CYCLOPHILIN
1, rotamase cyclophilin 5		 -0.47 0.31 -0.32
69 AT4G05460 RNI-like superfamily protein -0.47 0.32 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
70 C0208 Phosphatidylinositol-34:2 - Phosphatidylinositol-34:2 3-phosphoinositide biosynthesis,
D-myo-inositol (1,4,5)-trisphosphate biosynthesis,
sphingolipid biosynthesis,
linoleate biosynthesis I,
cutin biosynthesis,
glycerophosphodiester degradation,
phosphate acquisition,
glutathione redox reactions I 		0.8 0.47 -0.5 C0208
71 C0081 Digalactosyldiacylglycerol-36:2 - Digalactosyldiacylglycerol-36:2 triacylglycerol degradation,
linoleate biosynthesis I,
glycolipid biosynthesis,
glutathione redox reactions I 		0.78 0.49 -0.51 C0081
72 C0241 Stigmasterol 3-O-β-D-glucoside - Stigmasterol 3-O-β-D-glucoside - 0.77 0.47 -0.51 C0241
73 C0085 Digalactosyldiacylglycerol-36:6 - Digalactosyldiacylglycerol-36:6 triacylglycerol degradation,
linoleate biosynthesis I,
glycolipid biosynthesis,
glutathione redox reactions I 		0.77 0.49 -0.51 C0085
74 C0084 Digalactosyldiacylglycerol-36:5 - Digalactosyldiacylglycerol-36:5 triacylglycerol degradation,
linoleate biosynthesis I,
glycolipid biosynthesis,
glutathione redox reactions I 		0.76 0.48 -0.51 C0084
75 C0199 Phosphatidylethanolamine-36:6 - Phosphatidylethanolamine-36:6 phospholipid biosynthesis II,
linoleate biosynthesis I,
phosphatidylethanolamine biosynthesis I,
phosphatidylethanolamine biosynthesis II,
glutathione redox reactions I 		0.75 0.49 -0.48 C0199
76 C0247 Sulfoquinovosyldiacylglycerol-34:3 - Sulfoquinovosyldiacylglycerol sulfolipid biosynthesis 0.73 0.51 -0.48 C0247
77 C0197 Phosphatidylcholine-36:1 - Phosphatidylcholine-36:1 choline biosynthesis III,
diacylglycerol biosynthesis,
phospholipases,
triacylglycerol biosynthesis,
linoleate biosynthesis I,
phosphatidylcholine biosynthesis III,
glutathione redox reactions I 		0.69 0.46 -0.52 C0197
78 C0083 Digalactosyldiacylglycerol-36:4 - Digalactosyldiacylglycerol-36:4 triacylglycerol degradation,
linoleate biosynthesis I,
glycolipid biosynthesis,
glutathione redox reactions I 		0.63 0.52 -0.49 C0083
79 C0202 Phosphatidylglycerol-34:0 - Phosphatidylglycerol-34:0 cardiolipin biosynthesis II,
linoleate biosynthesis I,
glycerophosphodiester degradation,
glutathione redox reactions I 		0.6 0.33 -0.37
80 C0076 Digalactosyldiacylglycerol-34:1 - Digalactosyldiacylglycerol-34:1 triacylglycerol degradation,
linoleate biosynthesis I,
glycolipid biosynthesis,
glutathione redox reactions I 		0.56 0.34 -0.34
81 C0203 Phosphatidylglycerol-34:1 - Phosphatidylglycerol-34:1 cardiolipin biosynthesis II,
linoleate biosynthesis I,
glycerophosphodiester degradation,
glutathione redox reactions I 		0.56 0.32 -0.35