AT3G19220 : SHI-YO-U MEANS COTYLEDON IN JAPANESE
Query Information
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AGICode AT3G19220
Description protein disulfide isomerases
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G19220 protein disulfide isomerases SHI-YO-U MEANS COTYLEDON IN
JAPANESE, SNOWY COTYLEDON 2		 1 0.31 -0.3
2 AT4G37510 Ribonuclease III family protein 0.88 0.35 -0.31
3 AT1G74730 Protein of unknown function (DUF1118) 0.85 0.31 -0.31
4 AT2G39670 Radical SAM superfamily protein 0.85 0.32 -0.33
5 AT3G56010 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; Has 25
Blast hits to 25 proteins in 12 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.85 0.32 -0.31
6 AT5G55710 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast
thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 14 growth stages; BEST
Arabidopsis thaliana protein match is: Uncharacterised
conserved protein ycf60 (TAIR:AT2G47840.1); Has 1807 Blast
hits to 1807 proteins in 277 species: Archae - 0; Bacteria
- 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 translocon at the inner envelope
membrane of chloroplasts 20-V,
translocon at the inner envelope
membrane of chloroplasts 20-V		 0.84 0.32 -0.31
7 AT5G42310 Pentatricopeptide repeat (PPR-like) superfamily protein 0.83 0.32 -0.31
8 AT5G24020 septum site-determining protein (MIND) ACCUMULATION AND REPLICATION OF
CHLOROPLASTS 11, ATMIND1, MIND		 0.83 0.31 -0.32
9 AT3G04760 Pentatricopeptide repeat (PPR-like) superfamily protein 0.83 0.31 -0.31
10 AT4G16390 pentatricopeptide (PPR) repeat-containing protein suppressor of variegation 7 0.83 0.3 -0.33
11 AT3G08010 RNA binding ATAB2 0.82 0.33 -0.3
12 AT1G34380 5'-3' exonuclease family protein 0.82 0.32 -0.31
13 AT2G26580 plant-specific transcription factor YABBY family protein YABBY5 0.82 0.31 -0.32
14 AT2G03050 Mitochondrial transcription termination factor family
protein		 EMBRYO DEFECTIVE 93, SINGLET
OXYGEN-LINKED DEATH ACTIVATOR 10		 0.81 0.31 -0.3
15 AT3G47860 chloroplastic lipocalin chloroplastic lipocalin 0.81 0.31 -0.31
16 AT5G08000 glucan endo-1,3-beta-glucosidase-like protein 3 glucan
endo-1,3-beta-glucosidase-like
protein 3, PLASMODESMATA
CALLOSE-BINDING PROTEIN 2		 0.81 0.32 -0.33
17 AT4G13220 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 27 Blast hits to 27 proteins
in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.81 0.31 -0.32
18 AT1G09900 Pentatricopeptide repeat (PPR-like) superfamily protein 0.81 0.32 -0.3
19 AT5G17840 DnaJ/Hsp40 cysteine-rich domain superfamily protein 0.81 0.31 -0.33
20 AT1G19740 ATP-dependent protease La (LON) domain protein 0.8 0.31 -0.33
21 AT4G39960 Molecular chaperone Hsp40/DnaJ family protein 0.8 0.32 -0.33
22 AT2G47240 AMP-dependent synthetase and ligase family protein ECERIFERUM 8, LONG-CHAIN ACYL-COA
SYNTHASE 1		 0.8 0.32 -0.31
23 AT2G47840 Uncharacterised conserved protein ycf60 translocon at the inner envelope
membrane of chloroplasts 20-II,
translocon at the inner envelope
membrane of chloroplasts 20-II		 0.8 0.32 -0.3
24 AT3G57990 unknown protein; Has 1497 Blast hits to 1323 proteins in 52
species: Archae - 0; Bacteria - 4; Metazoa - 23; Fungi -
34; Plants - 61; Viruses - 0; Other Eukaryotes - 1375
(source: NCBI BLink).		 0.79 0.3 -0.33
25 AT3G56680 Single-stranded nucleic acid binding R3H protein 0.79 0.3 -0.31
26 AT3G61850 Dof-type zinc finger DNA-binding family protein dof affecting germination 1 -0.79 0.31 -0.31
27 AT1G44446 Pheophorbide a oxygenase family protein with Rieske
[2Fe-2S] domain		 ARABIDOPSIS THALIANA CHLOROPHYLL A
OXYGENASE, CHLOROPHYLL A
OXYGENASE, CHLORINA 1		 0.79 0.3 -0.33
28 AT3G61310 AT hook motif DNA-binding family protein 0.79 0.32 -0.3
29 AT1G14240 GDA1/CD39 nucleoside phosphatase family protein -0.77 0.31 -0.31
30 AT1G30270 CBL-interacting protein kinase 23 ATCIPK23, CBL-interacting protein
kinase 23, LOW-K+-SENSITIVE 1,
SOS2-like protein kinase 17,
SNF1-RELATED PROTEIN KINASE 3.23		 -0.72 0.28 -0.32
31 AT1G69526 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.72 0.33 -0.33
32 AT2G41850 polygalacturonase abscission zone A. thaliana ARABIDOPSIS DEHISCENCE ZONE
POLYGALACTURONASE 2,
polygalacturonase abscission zone
A. thaliana		 -0.71 0.31 -0.31
33 AT2G22330 cytochrome P450, family 79, subfamily B, polypeptide 3 cytochrome P450, family 79,
subfamily B, polypeptide 3		 -0.71 0.33 -0.31
34 AT5G53990 UDP-Glycosyltransferase superfamily protein -0.71 0.33 -0.33
35 AT1G05577 Domain of unknown function (DUF966) -0.69 0.31 -0.32
36 AT3G55890 Yippee family putative zinc-binding protein -0.69 0.31 -0.29
37 AT2G39310 jacalin-related lectin 22 jacalin-related lectin 22 -0.68 0.31 -0.31
38 AT1G33750 Terpenoid cyclases/Protein prenyltransferases superfamily
protein		 -0.68 0.32 -0.3
39 AT5G62580 ARM repeat superfamily protein -0.68 0.32 -0.33
40 AT4G15093 catalytic LigB subunit of aromatic ring-opening dioxygenase
family		 -0.67 0.31 -0.32
41 AT3G49810 ARM repeat superfamily protein -0.67 0.31 -0.3
42 AT2G03240 EXS (ERD1/XPR1/SYG1) family protein -0.67 0.31 -0.3
43 AT1G33360 ATP-dependent Clp protease -0.67 0.33 -0.32
44 AT5G48110 Terpenoid cyclases/Protein prenyltransferases superfamily
protein		 -0.66 0.33 -0.32
45 AT4G31100 wall-associated kinase, putative -0.66 0.31 -0.32
46 AT4G37295 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: stem, root, leaf;
EXPRESSED DURING: LP.06 six leaves visible, LP.04 four
leaves visible; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.66 0.33 -0.31
47 AT2G26700 AGC (cAMP-dependent, cGMP-dependent and protein kinase C)
kinase family protein		 PINOID2 -0.65 0.33 -0.32
48 AT5G60890 myb domain protein 34 ATMYB34, ALTERED TRYPTOPHAN
REGULATION 1, myb domain protein
34		 -0.65 0.3 -0.31
49 AT4G13235 embryo sac development arrest 21 embryo sac development arrest 21 -0.64 0.31 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
50 C0120 Isocitric acid - Isocitrate TCA cycle variation V (plant),
TCA cycle variation III (eukaryotic),
glutamine biosynthesis III,
glyoxylate cycle 		-0.8 0.43 -0.45 C0120