AT3G28170 : -
Query Information
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AGICode AT3G28170
Description unknown protein; Has 2 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G28170 unknown protein; Has 2 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 1 0.32 -0.32
2 AT3G57970 Emsy N Terminus (ENT)/ plant Tudor-like domains-containing
protein		 -0.68 0.31 -0.3
3 AT3G47660 Regulator of chromosome condensation (RCC1) family protein -0.66 0.33 -0.31
4 AT4G30570 Glucose-1-phosphate adenylyltransferase family protein 0.66 0.3 -0.32
5 AT3G44560 fatty acid reductase 8 fatty acid reductase 8 0.64 0.32 -0.33
6 AT1G61430 S-locus lectin protein kinase family protein -0.63 0.32 -0.32
7 AT5G01980 RING/U-box superfamily protein -0.62 0.3 -0.3
8 AT4G25590 actin depolymerizing factor 7 actin depolymerizing factor 7 0.62 0.28 -0.31
9 AT1G60530 Dynamin related protein 4A Dynamin related protein 4A 0.62 0.31 -0.31
10 AT2G47830 Cation efflux family protein 0.62 0.3 -0.33
11 AT1G17000 trehalose-phosphatase/synthase 3 trehalose-phosphatase/synthase 3,
TREHALOSE -6-PHOSPHATASE SYNTHASE
S3, trehalose-phosphatase/synthase
3		 0.62 0.31 -0.34
12 AT2G30690 Protein of unknown function, DUF593 -0.61 0.31 -0.31
13 AT1G33130 transposable element gene -0.61 0.3 -0.31
14 AT2G26280 CTC-interacting domain 7 CTC-interacting domain 7 0.61 0.3 -0.32
15 AT2G22160 Cysteine proteinases superfamily protein 0.61 0.32 -0.32
16 AT4G35820 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.6 0.35 -0.31
17 AT3G16220 Predicted eukaryotic LigT 0.6 0.34 -0.32
18 AT1G11880 transferases, transferring hexosyl groups 0.6 0.31 -0.32
19 AT1G70570 anthranilate phosphoribosyltransferase, putative 0.6 0.32 -0.31
20 AT1G08250 arogenate dehydratase 6 arogenate dehydratase 6,
Arabidopsis thaliana arogenate
dehydratase 6		 0.6 0.3 -0.32
21 AT3G45510 RING/U-box protein -0.6 0.33 -0.32
22 AT4G17160 RAB GTPase homolog B1A ATRAB2B, RAB GTPase homolog B1A,
RAB GTPase homolog B1A		 -0.6 0.33 -0.34
23 AT2G18640 geranylgeranyl pyrophosphate synthase 4 geranylgeranyl pyrophosphate
synthase 4		 -0.59 0.3 -0.33
24 AT1G32660 F-box and associated interaction domains-containing protein -0.59 0.31 -0.3
25 AT1G62070 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; Has 8 Blast hits to 8 proteins in 4
species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 2;
Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.59 0.33 -0.33
26 AT2G38900 Serine protease inhibitor, potato inhibitor I-type family
protein		 0.59 0.3 -0.32
27 AT2G17770 basic region/leucine zipper motif 27 basic region/leucine zipper motif
27, basic region/leucine zipper
motif 27, FD PARALOG		 -0.58 0.32 -0.31
28 AT5G19660 SITE-1 protease SITE-1 PROTEASE, ATSBT6.1, SITE-1
protease		 0.58 0.34 -0.33
29 AT2G44710 RNA-binding (RRM/RBD/RNP motifs) family protein 0.58 0.34 -0.33
30 AT1G54170 CTC-interacting domain 3 CTC-interacting domain 3 0.58 0.32 -0.31
31 AT3G33064 transposable element gene -0.58 0.31 -0.31
32 AT4G21490 NAD(P)H dehydrogenase B3 NAD(P)H dehydrogenase B3 -0.58 0.32 -0.3
33 AT3G03400 EF hand calcium-binding protein family -0.57 0.31 -0.3
34 AT5G43530 Helicase protein with RING/U-box domain -0.57 0.31 -0.34
35 AT3G03580 Tetratricopeptide repeat (TPR)-like superfamily protein -0.57 0.32 -0.33
36 AT2G26350 peroxin 10 ATPEX10, peroxin 10 0.57 0.32 -0.34
37 AT1G26090 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.57 0.32 -0.3
38 AT4G25610 C2H2-like zinc finger protein -0.57 0.31 -0.31
39 AT5G07430 Pectin lyase-like superfamily protein -0.57 0.32 -0.33
40 AT5G19710 BEST Arabidopsis thaliana protein match is: HPT
phosphotransmitter 4 (TAIR:AT3G16360.2); Has 1807 Blast
hits to 1807 proteins in 277 species: Archae - 0; Bacteria
- 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.57 0.32 -0.33
41 AT5G18920 Cox19-like CHCH family protein 0.57 0.33 -0.3
42 AT3G27980 Plant invertase/pectin methylesterase inhibitor superfamily -0.56 0.32 -0.3
43 AT5G01780 2-oxoglutarate-dependent dioxygenase family protein 0.56 0.3 -0.3
44 AT2G10050 transposable element gene 0.56 0.32 -0.32
45 AT1G29220 transcriptional regulator family protein 0.56 0.32 -0.32
46 AT1G63400 Pentatricopeptide repeat (PPR) superfamily protein -0.56 0.33 -0.34
47 AT2G26410 IQ-domain 4 IQ-domain 4 -0.56 0.34 -0.31
48 AT5G65130 Integrase-type DNA-binding superfamily protein -0.56 0.29 -0.3
49 AT1G01450 Protein kinase superfamily protein 0.56 0.31 -0.33
50 AT2G11110 transposable element gene 0.55 0.29 -0.31
51 AT1G63930 from the Czech 'roh' meaning 'corner' from the Czech 'roh' meaning
'corner'		 -0.55 0.32 -0.32
52 AT4G08790 Nitrilase/cyanide hydratase and apolipoprotein
N-acyltransferase family protein		 0.55 0.33 -0.31
53 AT5G28240 transposable element gene -0.55 0.31 -0.32
54 AT1G03050 ENTH/ANTH/VHS superfamily protein -0.55 0.32 -0.31
55 AT1G41770 transposable element gene -0.55 0.33 -0.33
56 AT5G63740 RING/U-box superfamily protein -0.55 0.31 -0.31
57 AT3G48030 hypoxia-responsive family protein / zinc finger (C3HC4-type
RING finger) family protein		 -0.55 0.31 -0.33
58 AT4G33390 Plant protein of unknown function (DUF827) -0.55 0.31 -0.34
59 AT2G27250 CLAVATA3 AtCLV3, CLAVATA3 -0.54 0.28 -0.32
60 AT2G36400 growth-regulating factor 3 growth-regulating factor 3,
growth-regulating factor 3		 -0.54 0.36 -0.33
61 AT1G16650 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.54 0.31 -0.33
62 AT1G70040 Protein of unknown function (DUF1163) -0.54 0.29 -0.34
63 AT3G22121 other RNA 0.54 0.33 -0.32
64 AT4G33710 CAP (Cysteine-rich secretory proteins, Antigen 5, and
Pathogenesis-related 1 protein) superfamily protein		 -0.54 0.32 -0.32
65 AT3G11760 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 14 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G04860.1); Has 84 Blast hits to 73 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.54 0.31 -0.34
66 AT5G18040 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G29760.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.54 0.33 -0.32
67 AT1G04700 PB1 domain-containing protein tyrosine kinase -0.54 0.3 -0.32
68 AT5G49310 importin alpha isoform 5 importin alpha isoform 5 -0.54 0.31 -0.31
69 AT2G22440 BEST Arabidopsis thaliana protein match is: Ribonuclease
H-like superfamily protein (TAIR:AT4G29090.1); Has 208
Blast hits to 191 proteins in 10 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 208; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.54 0.33 -0.33
70 AT4G03170 AP2/B3-like transcriptional factor family protein -0.53 0.32 -0.3
71 AT1G72000 Plant neutral invertase family protein alkaline/neutral invertase F 0.53 0.32 -0.3
72 AT1G73510 unknown protein; Has 7 Blast hits to 7 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.53 0.34 -0.32
73 AT4G05140 Nucleoside transporter family protein -0.53 0.31 -0.32
74 AT3G43330 transposable element gene -0.53 0.32 -0.33
75 AT4G12270 Copper amine oxidase family protein -0.53 0.32 -0.33
76 AT3G25630 transposable element gene -0.53 0.32 -0.32
77 AT3G61410 BEST Arabidopsis thaliana protein match is: U-box
domain-containing protein kinase family protein
(TAIR:AT2G45910.1); Has 232 Blast hits to 229 proteins in
13 species: Archae - 0; Bacteria - 0; Metazoa - 13; Fungi -
0; Plants - 218; Viruses - 0; Other Eukaryotes - 1 (source:
NCBI BLink).		 0.53 0.32 -0.31
78 AT3G45060 high affinity nitrate transporter 2.6 ARABIDOPSIS THALIANA HIGH AFFINITY
NITRATE TRANSPORTER 2.6, high
affinity nitrate transporter 2.6		 0.53 0.31 -0.31
79 AT1G04730 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 CHROMOSOME TRANSMISSION FIDELITY
18		 0.53 0.3 -0.32
80 AT3G29070 emp24/gp25L/p24 family/GOLD family protein -0.53 0.31 -0.32
81 AT4G23580 Galactose oxidase/kelch repeat superfamily protein -0.53 0.32 -0.3
82 AT3G43860 glycosyl hydrolase 9A4 glycosyl hydrolase 9A4, glycosyl
hydrolase 9A4		 -0.53 0.32 -0.32
83 AT4G31740 Sec1/munc18-like (SM) proteins superfamily 0.52 0.31 -0.31
84 AT3G42360 transposable element gene -0.52 0.33 -0.32
85 AT1G08270 CONTAINS InterPro DOMAIN/s: MIT (InterPro:IPR007330); BEST
Arabidopsis thaliana protein match is: AAA-type ATPase
family protein (TAIR:AT2G27600.1); Has 1133 Blast hits to
1133 proteins in 252 species: Archae - 47; Bacteria - 0;
Metazoa - 540; Fungi - 145; Plants - 223; Viruses - 0;
Other Eukaryotes - 178 (source: NCBI BLink).		 0.51 0.31 -0.31
86 AT5G42450 Pentatricopeptide repeat (PPR) superfamily protein -0.51 0.31 -0.32
87 AT2G20970 unknown protein; Has 204 Blast hits to 188 proteins in 80
species: Archae - 7; Bacteria - 37; Metazoa - 56; Fungi -
18; Plants - 9; Viruses - 2; Other Eukaryotes - 75 (source:
NCBI BLink).		 -0.51 0.32 -0.32
88 AT4G17785 myb domain protein 39 myb domain protein 39 0.51 0.29 -0.31
89 AT5G20760 transposable element gene -0.51 0.33 -0.3
90 AT4G34640 squalene synthase 1 ERG9, squalene synthase 1 0.51 0.32 -0.34
91 AT5G09690 magnesium transporter 7 ARABIDOPSIS THALIANA MAGNESIUM
TRANSPORTER 7, magnesium
transporter 7, MRS2-7		 0.51 0.32 -0.3
92 AT4G10710 global transcription factor C global transcription factor C -0.51 0.34 -0.3
93 AT3G14820 GDSL-like Lipase/Acylhydrolase superfamily protein 0.51 0.32 -0.33
94 AT5G61920 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 6 plant structures;
EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal
differentiation and expansion stage, E expanded cotyledon
stage, D bilateral stage; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G67170.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.51 0.33 -0.33
95 AT1G48220 Protein kinase superfamily protein 0.51 0.32 -0.32
96 AT2G35570 pseudogene, serpin (serine protease inhibitor) family,
similar to phloem serpin-1 (Cucurbita maxima) GI:9937311;
blastp match of 49% identity and 9.9e-85 P-value to
GP|26224736|gb|AAN76362.1||AY158152 serpin-like protein
{Citrus x paradisi}		 0.5 0.33 -0.32
97 AT1G66930 Protein kinase superfamily protein 0.5 0.31 -0.32
98 AT1G06540 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G30930.1); Has 16 Blast hits
to 16 proteins in 3 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 16; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.5 0.33 -0.31
99 AT3G22650 F-box and associated interaction domains-containing protein S-LOCUS F-BOX 61, CEGENDUO,
S-LOCUS F-BOX 61		 0.5 0.33 -0.33
100 AT1G56030 RING/U-box superfamily protein 0.49 0.32 -0.31
101 AT1G51000 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G51020.1); Has 19 Blast hits
to 16 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 19; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.49 0.3 -0.31
102 AT2G13950 Cysteine/Histidine-rich C1 domain family protein 0.49 0.32 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
103 C0130 Kaempferol-3-O-α-rhamnopyranosyl(1,2)-β-glucopyranoside-7-O-α-rhamnopyranoside Kaempferol-3-O-α-L-rhamnopyranosyl(1,2)-β-D-glucopyranoside-7-O-α-L-rhamnopyranoside - -0.66 0.42 -0.49
104 C0116 Hydroxylamine - Hydroxylamine - 0.55 0.46 -0.45 C0116
105 C0246 Sulfoquinovosyldiacylglycerol-34:2 - Sulfoquinovosyldiacylglycerol sulfolipid biosynthesis -0.53 0.32 -0.34 C0246
106 C0064 Campesterol 3-O-β-D-glucoside - - - -0.52 0.35 -0.35
107 C0078 Digalactosyldiacylglycerol-34:3 - Digalactosyldiacylglycerol-34:3 triacylglycerol degradation,
linoleate biosynthesis I,
glycolipid biosynthesis,
glutathione redox reactions I 		-0.52 0.34 -0.32
108 C0205 Phosphatidylglycerol-34:3 - Phosphatidylglycerol-34:3 cardiolipin biosynthesis II,
linoleate biosynthesis I,
glycerophosphodiester degradation,
glutathione redox reactions I 		-0.52 0.33 -0.33