AT3G19670 : pre-mRNA-processing protein 40B
Query Information
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AGICode AT3G19670
Description pre-mRNA-processing protein 40B
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G19670 pre-mRNA-processing protein 40B pre-mRNA-processing protein 40B,
pre-mRNA-processing protein 40B		 1 0.33 -0.31
2 AT4G17410 DWNN domain, a CCHC-type zinc finger 0.73 0.32 -0.3
3 AT2G06110 transposable element gene 0.67 0.33 -0.33
4 AT2G47410 WD40/YVTN repeat-like-containing domain;Bromodomain 0.66 0.3 -0.32
5 AT3G06480 DEAD box RNA helicase family protein 0.66 0.32 -0.33
6 AT1G63490 transcription factor jumonji (jmjC) domain-containing
protein		 0.65 0.31 -0.3
7 AT1G29260 peroxin 7 ARABIDOPSIS PEROXIN 7, peroxin 7 -0.65 0.31 -0.33
8 AT1G23510 unknown protein; BEST Arabidopsis thaliana protein match
is: Domain of unknown function (DUF220) (TAIR:AT1G23520.1);
Has 133 Blast hits to 120 proteins in 9 species: Archae -
0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 133;
Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.64 0.32 -0.31
9 AT2G22090 RNA-binding (RRM/RBD/RNP motifs) family protein UBA1A -0.64 0.32 -0.34
10 AT4G22300 carboxylesterases SUPPRESSOR OF AVRBST-ELICITED
RESISTANCE 1		 -0.63 0.3 -0.32
11 AT4G12120 Sec1/munc18-like (SM) proteins superfamily ATSEC1B, SEC1B 0.63 0.33 -0.31
12 AT5G01290 mRNA capping enzyme family protein 0.63 0.34 -0.31
13 AT5G02560 histone H2A 12 histone H2A 12 -0.62 0.31 -0.32
14 AT2G46340 SPA (suppressor of phyA-105) protein family SUPPRESSOR OF PHYA-105 1 0.61 0.31 -0.31
15 AT2G46225 ABI-1-like 1 ABI-1-like 1 -0.61 0.3 -0.31
16 AT2G46330 arabinogalactan protein 16 arabinogalactan protein 16,
ATAGP16		 -0.61 0.32 -0.31
17 AT3G02990 heat shock transcription factor A1E heat shock transcription factor
A1E, heat shock transcription
factor A1E		 0.61 0.32 -0.32
18 AT2G02590 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Putative small
multi-drug export (InterPro:IPR009577); Has 405 Blast hits
to 405 proteins in 185 species: Archae - 65; Bacteria -
295; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0;
Other Eukaryotes - 22 (source: NCBI BLink).		 -0.61 0.32 -0.32
19 AT5G16920 Fasciclin-like arabinogalactan family protein 0.6 0.33 -0.32
20 AT5G61590 Integrase-type DNA-binding superfamily protein -0.6 0.31 -0.3
21 AT3G12640 RNA binding (RRM/RBD/RNP motifs) family protein 0.59 0.31 -0.31
22 AT5G60170 RNA binding (RRM/RBD/RNP motifs) family protein 0.59 0.31 -0.3
23 AT4G27930 unknown protein; Has 4 Blast hits to 4 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.59 0.31 -0.31
24 AT1G23020 ferric reduction oxidase 3 FERRIC REDUCTION OXIDASE 3, ferric
reduction oxidase 3		 -0.58 0.34 -0.31
25 AT1G20100 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G75860.1); Has 471 Blast hits
to 438 proteins in 92 species: Archae - 0; Bacteria - 14;
Metazoa - 217; Fungi - 43; Plants - 91; Viruses - 1; Other
Eukaryotes - 105 (source: NCBI BLink).		 0.58 0.33 -0.32
26 AT3G21350 RNA polymerase transcriptional regulation mediator-related MED6 -0.57 0.33 -0.31
27 AT5G64390 RNA-binding KH domain-containing protein HUA ENHANCER 4 0.57 0.3 -0.32
28 AT1G75790 SKU5 similar 18 SKU5 similar 18 0.57 0.33 -0.31
29 AT5G05250 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G56360.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.56 0.31 -0.31
30 AT3G22121 other RNA 0.56 0.33 -0.33
31 AT1G79350 RING/FYVE/PHD zinc finger superfamily protein embryo defective 1135 0.56 0.33 -0.32
32 AT5G66620 DA1-related protein 6 DA1-related protein 6 0.56 0.34 -0.32
33 AT5G46750 ARF-GAP domain 9 ARF-GAP domain 9 -0.55 0.31 -0.34
34 AT3G06090 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: flower, leaf, seed;
EXPRESSED DURING: petal differentiation and expansion
stage, LP.08 eight leaves visible, E expanded cotyledon
stage; Has 7 Blast hits to 7 proteins in 2 species: Archae
- 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 7;
Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.55 0.31 -0.32
35 AT2G26280 CTC-interacting domain 7 CTC-interacting domain 7 0.55 0.33 -0.33
36 AT3G22910 ATPase E1-E2 type family protein / haloacid
dehalogenase-like hydrolase family protein		 0.55 0.32 -0.32
37 AT4G02560 Homeodomain-like superfamily protein luminidependens 0.54 0.31 -0.31
38 AT1G48160 signal recognition particle 19 kDa protein, putative /
SRP19, putative		 -0.54 0.33 -0.32
39 AT5G53670 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: sperm cell; Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 0.54 0.33 -0.3
40 AT3G28400 transposable element gene -0.54 0.32 -0.31
41 AT1G53690 DNA directed RNA polymerase, 7 kDa subunit -0.54 0.32 -0.32
42 AT5G48340 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.53 0.31 -0.33
43 AT1G63470 AT hook motif DNA-binding family protein 0.53 0.31 -0.29
44 AT2G41160 Ubiquitin-associated (UBA) protein 0.53 0.33 -0.32
45 AT2G36020 HVA22-like protein J HVA22-like protein J -0.53 0.3 -0.32
46 AT1G32210 Defender against death (DAD family) protein DEFENDER AGAINST APOPTOTIC DEATH 1 -0.52 0.3 -0.3
47 AT5G39070 transposable element gene -0.52 0.31 -0.32
48 AT5G47580 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G17250.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 ALTERED SEED GERMINATION 7 0.52 0.3 -0.31
49 AT1G65630 DegP protease 3 DegP protease 3 -0.51 0.32 -0.3
50 AT5G14940 Major facilitator superfamily protein 0.51 0.33 -0.32
51 AT3G22650 F-box and associated interaction domains-containing protein S-LOCUS F-BOX 61, CEGENDUO,
S-LOCUS F-BOX 61		 0.51 0.31 -0.31
52 AT2G17770 basic region/leucine zipper motif 27 basic region/leucine zipper motif
27, basic region/leucine zipper
motif 27, FD PARALOG		 -0.5 0.31 -0.31
53 AT5G56230 prenylated RAB acceptor 1.G2 prenylated RAB acceptor 1.G2 -0.5 0.32 -0.29
54 AT4G04690 F-box and associated interaction domains-containing protein -0.5 0.32 -0.33
55 AT2G26680 CONTAINS InterPro DOMAIN/s: Methyltransferase FkbM
(InterPro:IPR006342); Has 1073 Blast hits to 1073 proteins
in 243 species: Archae - 45; Bacteria - 509; Metazoa - 0;
Fungi - 4; Plants - 60; Viruses - 4; Other Eukaryotes - 451
(source: NCBI BLink).		 -0.5 0.31 -0.32