AGICode | AT3G20550 |
Description | SMAD/FHA domain-containing protein |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
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pcc | 2.5% | 97.5% | PPI | |||||
1 | AT3G20550 | SMAD/FHA domain-containing protein | DAWDLE | 1 | 0.31 | -0.32 |
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2 | AT2G28520 | vacuolar proton ATPase A1 | vacuolar proton ATPase A1 | -0.69 | 0.33 | -0.35 |
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3 | AT3G23300 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
-0.68 | 0.32 | -0.31 |
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4 | AT5G14950 | golgi alpha-mannosidase II | ATGMII, golgi alpha-mannosidase II | -0.67 | 0.3 | -0.31 |
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5 | AT4G32410 | cellulose synthase 1 | CELLULOSE SYNTHASE 1, cellulose synthase 1, RADIALLY SWOLLEN 1 |
-0.66 | 0.31 | -0.32 |
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6 | AT1G15710 | prephenate dehydrogenase family protein | -0.66 | 0.31 | -0.3 |
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7 | AT2G10070 | transposable element gene | -0.66 | 0.33 | -0.31 |
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8 | AT1G29470 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
-0.66 | 0.31 | -0.32 |
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9 | AT1G26460 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.66 | 0.31 | -0.29 |
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10 | AT1G12680 | phosphoenolpyruvate carboxylase-related kinase 2 | phosphoenolpyruvate carboxylase-related kinase 2 |
0.65 | 0.33 | -0.31 |
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11 | AT5G61970 | signal recognition particle-related / SRP-related | -0.64 | 0.29 | -0.32 |
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12 | AT5G61780 | TUDOR-SN protein 2 | Arabidopsis thaliana TUDOR-SN protein 2, TUDOR-SN protein 2, TUDOR-SN protein 2 |
-0.64 | 0.31 | -0.32 |
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13 | AT5G13790 | AGAMOUS-like 15 | AGAMOUS-like 15 | 0.64 | 0.32 | -0.31 |
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14 | AT2G21390 | Coatomer, alpha subunit | -0.63 | 0.32 | -0.31 |
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15 | AT1G73240 | CONTAINS InterPro DOMAIN/s: Nucleoporin protein Ndc1-Nup (InterPro:IPR019049); Has 36 Blast hits to 36 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.63 | 0.3 | -0.32 |
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16 | AT1G10520 | DNA polymerase lambda (POLL) | AtPol{lambda}, DNA polymerase {lambda} |
0.63 | 0.31 | -0.33 |
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17 | AT4G03750 | transposable element gene | -0.63 | 0.29 | -0.34 |
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18 | AT1G29880 | glycyl-tRNA synthetase / glycine--tRNA ligase | -0.63 | 0.31 | -0.34 |
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19 | AT1G28070 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33510.1); Has 85 Blast hits to 77 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 85; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.63 | 0.33 | -0.3 |
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20 | AT3G23160 | Protein of unknown function (DUF668) | 0.62 | 0.32 | -0.33 |
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21 | AT1G34020 | Nucleotide-sugar transporter family protein | -0.62 | 0.33 | -0.32 |
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22 | AT2G22125 | binding | cellulose synthase-interactive protein 1, POM-POM 2 |
-0.62 | 0.31 | -0.29 |
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23 | AT1G48040 | Protein phosphatase 2C family protein | -0.62 | 0.34 | -0.3 |
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24 | AT3G28720 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G58100.1); Has 1610 Blast hits to 344 proteins in 85 species: Archae - 0; Bacteria - 567; Metazoa - 95; Fungi - 71; Plants - 145; Viruses - 0; Other Eukaryotes - 732 (source: NCBI BLink). |
-0.62 | 0.31 | -0.3 |
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25 | AT5G06480 | Immunoglobulin E-set superfamily protein | 0.61 | 0.32 | -0.3 |
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26 | AT1G06440 | Ubiquitin carboxyl-terminal hydrolase family protein | -0.61 | 0.32 | -0.29 |
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27 | AT5G62990 | Ubiquitin carboxyl-terminal hydrolase family protein | embryo defective 1692 | -0.61 | 0.31 | -0.29 |
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28 | AT5G15150 | homeobox 3 | homeobox 3, ATHB3, HOMEOBOX FROM ARABIDOPSIS THALIANA 7, homeobox 3 |
-0.61 | 0.29 | -0.3 |
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29 | AT5G03555 | permease, cytosine/purines, uracil, thiamine, allantoin family protein |
-0.61 | 0.32 | -0.32 |
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30 | AT2G06140 | transposable element gene | 0.61 | 0.3 | -0.33 |
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31 | AT2G42950 | Magnesium transporter CorA-like family protein | 0.61 | 0.33 | -0.31 |
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32 | AT5G08305 | Pentatricopeptide repeat (PPR) superfamily protein | -0.61 | 0.32 | -0.3 |
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33 | AT1G44980 | pectin methylesterase 7 | A. THALIANA PECTIN METHYLESTERASE 7, pectin methylesterase 7 |
-0.61 | 0.34 | -0.32 |
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34 | AT5G53220 | unknown protein; Has 3099 Blast hits to 2528 proteins in 332 species: Archae - 2; Bacteria - 245; Metazoa - 1059; Fungi - 555; Plants - 177; Viruses - 49; Other Eukaryotes - 1012 (source: NCBI BLink). |
0.61 | 0.3 | -0.34 |
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35 | AT2G22100 | RNA-binding (RRM/RBD/RNP motifs) family protein | -0.61 | 0.31 | -0.33 |
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36 | AT2G14810 | unknown protein; Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.6 | 0.32 | -0.29 |
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37 | AT1G67220 | histone acetyltransferase of the CBP family 2 | ARABIDOPSIS THALIANA P300/CBP ACETYLTRANSFERASE-RELATED PROTEIN 1, HAC02, histone acetyltransferase of the CBP family 2 |
-0.6 | 0.31 | -0.3 |
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38 | AT5G57410 | Afadin/alpha-actinin-binding protein | 0.6 | 0.33 | -0.32 |
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39 | AT3G19790 | unknown protein; Has 32 Blast hits to 26 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 13; Fungi - 2; Plants - 14; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). |
0.6 | 0.29 | -0.31 |
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40 | AT5G35640 | Putative endonuclease or glycosyl hydrolase | -0.59 | 0.31 | -0.32 |
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41 | AT1G43690 | ubiquitin interaction motif-containing protein | -0.59 | 0.32 | -0.31 |
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42 | AT2G17050 | disease resistance protein (TIR-NBS-LRR class), putative | -0.59 | 0.32 | -0.32 |
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43 | AT3G14470 | NB-ARC domain-containing disease resistance protein | 0.59 | 0.34 | -0.3 |
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44 | AT1G32000 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G38190.1); Has 14 Blast hits to 14 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 14; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.59 | 0.32 | -0.33 |
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45 | AT4G14160 | Sec23/Sec24 protein transport family protein | -0.59 | 0.32 | -0.32 |
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46 | AT5G10840 | Endomembrane protein 70 protein family | -0.59 | 0.3 | -0.31 |
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47 | AT1G33250 | Protein of unknown function (DUF604) | -0.59 | 0.32 | -0.34 |
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48 | AT5G52860 | ABC-2 type transporter family protein | ATP-binding cassette G8 | -0.59 | 0.31 | -0.3 |
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49 | AT3G24850 | Domain of unknown function (DUF313) | -0.58 | 0.34 | -0.32 |
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50 | AT3G43420 | unknown protein; Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.58 | 0.32 | -0.32 |
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51 | AT2G41451 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G57200.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.58 | 0.32 | -0.31 |
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52 | AT3G58300 | Arabidopsis phospholipase-like protein (PEARLI 4) family | -0.58 | 0.31 | -0.29 |
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53 | AT5G64740 | cellulose synthase 6 | cellulose synthase 6, E112, ISOXABEN RESISTANT 2, PROCUSTE 1 |
-0.58 | 0.33 | -0.31 |
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54 | AT1G10950 | transmembrane nine 1 | AtTMN1, transmembrane nine 1 | -0.58 | 0.32 | -0.32 |
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55 | AT3G57890 | Tubulin binding cofactor C domain-containing protein | -0.58 | 0.35 | -0.33 |
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56 | AT2G05270 | unknown protein; Has 3 Blast hits to 3 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.58 | 0.33 | -0.31 |
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57 | AT1G49800 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: sepal, male gametophyte, stamen; EXPRESSED DURING: 4 anthesis; Has 12 Blast hits to 12 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 12; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.58 | 0.32 | -0.31 |
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58 | AT3G07060 | NHL domain-containing protein | embryo defective 1974 | -0.57 | 0.31 | -0.31 |
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59 | AT4G12860 | EF hand calcium-binding protein family | unfertilized embryo sac 14 | -0.57 | 0.34 | -0.32 |
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60 | AT2G24800 | Peroxidase superfamily protein | -0.57 | 0.3 | -0.31 |
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61 | AT3G27390 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G40640.1); Has 101 Blast hits to 99 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 101; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.57 | 0.3 | -0.33 |
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62 | AT5G64290 | dicarboxylate transport 2.1 | DCT, dicarboxylate transport 2.1 | -0.57 | 0.32 | -0.32 |
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63 | AT2G36840 | ACT-like superfamily protein | ACT domain repeats 10 | 0.57 | 0.33 | -0.32 |
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64 | AT2G16920 | ubiquitin-conjugating enzyme 23 | PHO2 FAMILY UBIQUITIN CONJUGATION ENZYME 2, ubiquitin-conjugating enzyme 23 |
-0.57 | 0.32 | -0.31 |
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65 | AT5G19980 | golgi nucleotide sugar transporter 4 | golgi nucleotide sugar transporter 4 |
-0.57 | 0.33 | -0.34 |
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66 | AT5G28090 | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.56 | 0.31 | -0.32 |
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67 | AT3G60270 | Cupredoxin superfamily protein | -0.56 | 0.33 | -0.3 |
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68 | AT2G40730 | Protein kinase family protein with ARM repeat domain | cytoplasmic tRNA export protein | -0.56 | 0.31 | -0.32 |
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69 | AT2G03500 | Homeodomain-like superfamily protein | 0.56 | 0.3 | -0.32 |
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70 | AT4G33530 | K+ uptake permease 5 | K+ uptake permease 5 | -0.56 | 0.33 | -0.31 |
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71 | AT2G42640 | Mitogen activated protein kinase kinase kinase-related | 0.56 | 0.29 | -0.32 |
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72 | AT4G15020 | hAT transposon superfamily | -0.56 | 0.31 | -0.29 |
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73 | AT1G26590 | C2H2-like zinc finger protein | -0.56 | 0.32 | -0.31 |
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74 | AT3G02280 | Flavodoxin family protein | -0.56 | 0.33 | -0.31 |
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75 | AT3G50660 | Cytochrome P450 superfamily protein | CLOMAZONE-RESISTANT, CYTOCHROME P450 90B1, DWARF 4, PARTIALLY SUPPRESSING COI1 INSENSITIVITY TO JA 1, SHADE AVOIDANCE 1, SUPPRESSOR OF NPH4 2 |
0.56 | 0.31 | -0.33 |
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76 | AT1G74380 | xyloglucan xylosyltransferase 5 | xyloglucan xylosyltransferase 5 | -0.56 | 0.33 | -0.28 |
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77 | AT1G74260 | purine biosynthesis 4 | purine biosynthesis 4 | -0.56 | 0.32 | -0.33 |
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78 | AT3G61860 | RNA-binding (RRM/RBD/RNP motifs) family protein | arginine/serine-rich splicing factor 31, arginine/serine-rich splicing factor 31, arginine/serine-rich splicing factor 31, arginine/serine-rich splicing factor 31 |
0.56 | 0.33 | -0.35 |
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79 | AT5G53540 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
-0.56 | 0.31 | -0.33 |
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80 | AT2G40410 | Staphylococcal nuclease homologue | 0.55 | 0.32 | -0.3 |
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81 | AT3G14320 | Zinc finger, C3HC4 type (RING finger) family protein | -0.55 | 0.3 | -0.32 |
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82 | AT5G53480 | ARM repeat superfamily protein | -0.55 | 0.32 | -0.32 |
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83 | AT2G38910 | calcium-dependent protein kinase 20 | calcium-dependent protein kinase 20 |
-0.55 | 0.32 | -0.32 |
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84 | AT1G53640 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; Has 1186 Blast hits to 678 proteins in 89 species: Archae - 0; Bacteria - 50; Metazoa - 731; Fungi - 92; Plants - 226; Viruses - 4; Other Eukaryotes - 83 (source: NCBI BLink). |
-0.54 | 0.29 | -0.33 |
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85 | AT5G49500 | Signal recognition particle, SRP54 subunit protein | 0.54 | 0.33 | -0.31 |
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86 | AT4G38880 | GLN phosphoribosyl pyrophosphate amidotransferase 3 | GLN phosphoribosyl pyrophosphate amidotransferase 3, GLN phosphoribosyl pyrophosphate amidotransferase 3 |
-0.54 | 0.32 | -0.32 |
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87 | AT4G27330 | sporocyteless (SPL) | NOZZLE, SPOROCYTELESS | -0.54 | 0.3 | -0.32 |
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88 | AT3G57650 | lysophosphatidyl acyltransferase 2 | lysophosphatidyl acyltransferase 2 | -0.54 | 0.31 | -0.32 |
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89 | AT1G73310 | serine carboxypeptidase-like 4 | serine carboxypeptidase-like 4 | -0.54 | 0.28 | -0.32 |
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90 | AT5G42910 | Basic-leucine zipper (bZIP) transcription factor family protein |
0.54 | 0.3 | -0.32 |
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91 | AT5G53480 | ARM repeat superfamily protein | -0.54 | 0.31 | -0.32 |
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92 | AT4G14640 | calmodulin 8 | calmodulin-like 8, calmodulin 8 | -0.54 | 0.31 | -0.31 |
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93 | AT3G52690 | RNI-like superfamily protein | -0.54 | 0.33 | -0.32 |
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94 | AT2G18470 | roline-rich extensin-like receptor kinase 4 | proline-rich extensin-like receptor kinase 4, proline-rich extensin-like receptor kinase 4 |
0.54 | 0.32 | -0.32 |
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95 | AT5G54830 | DOMON domain-containing protein / dopamine beta-monooxygenase N-terminal domain-containing protein |
-0.54 | 0.33 | -0.33 |
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96 | AT1G13830 | Carbohydrate-binding X8 domain superfamily protein | -0.54 | 0.29 | -0.3 |
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97 | AT5G11430 | SPOC domain / Transcription elongation factor S-II protein | -0.54 | 0.33 | -0.34 |
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98 | AT3G48440 | Zinc finger C-x8-C-x5-C-x3-H type family protein | 0.53 | 0.31 | -0.3 |
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99 | AT3G28770 | Protein of unknown function (DUF1216) | 0.53 | 0.33 | -0.33 |
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100 | AT5G29090 | transposable element gene | 0.53 | 0.29 | -0.3 |
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101 | AT1G49780 | plant U-box 26 | plant U-box 26 | 0.53 | 0.3 | -0.31 |
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102 | AT4G31450 | RING/U-box superfamily protein | 0.52 | 0.31 | -0.33 |
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103 | AT5G53840 | F-box/RNI-like/FBD-like domains-containing protein | 0.52 | 0.31 | -0.3 |
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104 | AT4G18350 | nine-cis-epoxycarotenoid dioxygenase 2 | NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 2, nine-cis-epoxycarotenoid dioxygenase 2 |
0.52 | 0.32 | -0.31 |
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105 | AT1G52560 | HSP20-like chaperones superfamily protein | 0.52 | 0.3 | -0.33 |
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106 | AT5G07660 | structural maintenance of chromosomes 6A | structural maintenance of chromosomes 6A |
0.52 | 0.28 | -0.32 |
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107 | AT2G39060 | Nodulin MtN3 family protein | AtSWEET9, SWEET9 | 0.52 | 0.32 | -0.31 |
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108 | AT1G35250 | Thioesterase superfamily protein | 0.51 | 0.32 | -0.29 |
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109 | AT3G30360 | transposable element gene | 0.51 | 0.33 | -0.3 |
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110 | AT5G57260 | cytochrome P450, family 71, subfamily B, polypeptide 10 | cytochrome P450, family 71, subfamily B, polypeptide 10 |
0.51 | 0.29 | -0.33 |
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111 | AT5G47260 | ATP binding;GTP binding;nucleotide binding;nucleoside-triphosphatases |
0.51 | 0.32 | -0.31 |
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112 | AT5G24750 | UDP-Glycosyltransferase superfamily protein | 0.51 | 0.31 | -0.33 |
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113 | AT3G53350 | ROP interactive partner 4 | ROP interactive partner 4 | 0.51 | 0.3 | -0.32 |
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114 | AT3G04800 | translocase inner membrane subunit 23-3 | translocase inner membrane subunit 23-3, translocase inner membrane subunit 23-3 |
0.51 | 0.33 | -0.33 |
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115 | AT2G24830 | zinc finger (CCCH-type) family protein / D111/G-patch domain-containing protein |
0.51 | 0.32 | -0.33 |
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116 | AT1G11170 | Protein of unknown function (DUF707) | 0.5 | 0.34 | -0.29 |
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117 | AT1G40150 | transposable element gene | 0.5 | 0.3 | -0.32 |
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118 | AT4G00590 | N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein |
0.49 | 0.31 | -0.32 |
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119 | AT5G17580 | Phototropic-responsive NPH3 family protein | 0.49 | 0.33 | -0.3 |
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120 | AT4G28280 | LORELEI-LIKE-GPI ANCHORED PROTEIN 3 | LORELEI-LIKE-GPI ANCHORED PROTEIN 3 |
0.49 | 0.28 | -0.32 |
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121 | AT2G14095 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; Has 106 Blast hits to 103 proteins in 21 species: Archae - 0; Bacteria - 5; Metazoa - 0; Fungi - 4; Plants - 87; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). |
0.49 | 0.3 | -0.31 |
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CID | Metabolite name | Pathway Information | Correlation | link | ||||||
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Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
122 | C0121 | Isoheptylglucosinolate | - | - | - | -0.76 | 0.42 | -0.44 | ||
123 | C0031 | 3-Methylthio-n-propylglucosinolate | - | 3-Methylthiopropylglucosinolate | glucosinolate biosynthesis from homomethionine | -0.74 | 0.44 | -0.46 |
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124 | C0199 | Phosphatidylethanolamine-36:6 | - | Phosphatidylethanolamine-36:6 | phospholipid biosynthesis II, linoleate biosynthesis I, phosphatidylethanolamine biosynthesis I, phosphatidylethanolamine biosynthesis II, glutathione redox reactions I |
-0.7 | 0.54 | -0.47 |
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