AT3G20560 : ARABIDOPSIS THALIANA PROTEIN DISULFIDE ISOMERASE 12.....
Query Information
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AGICode AT3G20560
Description PDI-like 5-3
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G20560 PDI-like 5-3 ARABIDOPSIS THALIANA PROTEIN
DISULFIDE ISOMERASE 12, PDI-like
5-3, PROTEIN DISULFIDE ISOMERASE
12, PDI-like 5-3		 1 0.31 -0.33
2 AT2G28400 Protein of unknown function, DUF584 -0.78 0.3 -0.3
3 AT5G45630 Protein of unknown function, DUF584 -0.75 0.33 -0.3
4 AT4G00710 BR-signaling kinase 3 BR-signaling kinase 3 0.73 0.3 -0.32
5 AT1G58360 amino acid permease 1 amino acid permease 1, NEUTRAL
AMINO ACID TRANSPORTER 2		 -0.73 0.34 -0.33
6 AT1G12020 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G62422.1); Has 89 Blast hits
to 88 proteins in 16 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other
Eukaryotes - 2 (source: NCBI BLink).		 0.73 0.32 -0.32
7 AT5G44020 HAD superfamily, subfamily IIIB acid phosphatase 0.73 0.32 -0.3
8 AT3G23660 Sec23/Sec24 protein transport family protein 0.72 0.32 -0.34
9 AT2G38090 Duplicated homeodomain-like superfamily protein 0.72 0.32 -0.32
10 AT1G51060 histone H2A 10 histone H2A 10 0.71 0.3 -0.3
11 AT2G38790 unknown protein; Has 21 Blast hits to 21 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 19; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 -0.71 0.31 -0.3
12 AT1G61660 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.71 0.33 -0.32
13 AT1G06790 RNA polymerase Rpb7 N-terminal domain-containing protein 0.7 0.32 -0.3
14 AT5G17850 Sodium/calcium exchanger family protein -0.7 0.3 -0.34
15 AT2G35900 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED
DURING: 13 growth stages; Has 32 Blast hits to 32 proteins
in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 32; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.69 0.32 -0.31
16 AT1G67920 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G24600.1); Has 22 Blast hits
to 22 proteins in 5 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.69 0.32 -0.31
17 AT5G12270 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.69 0.31 -0.31
18 AT1G60470 galactinol synthase 4 galactinol synthase 4, galactinol
synthase 4		 -0.69 0.3 -0.31
19 AT3G07360 plant U-box 9 ARABIDOPSIS THALIANA PLANT U-BOX
9, plant U-box 9		 -0.68 0.31 -0.31
20 AT1G69270 receptor-like protein kinase 1 receptor-like protein kinase 1 -0.68 0.35 -0.33
21 AT1G14670 Endomembrane protein 70 protein family 0.68 0.3 -0.32
22 AT4G22360 SWIB complex BAF60b domain-containing protein -0.68 0.31 -0.3
23 AT5G24830 Tetratricopeptide repeat (TPR)-like superfamily protein 0.68 0.32 -0.32
24 AT3G01120 Pyridoxal phosphate (PLP)-dependent transferases
superfamily protein		 AtCGS1, A. thaliana cystathionine
gamma-synthetase 1, CYSTATHIONINE
GAMMA-SYNTHASE, CYSTATHIONINE
GAMMA-SYNTHASE 1, METHIONINE
OVERACCUMULATION 1		 0.68 0.3 -0.3
25 AT4G11290 Peroxidase superfamily protein 0.68 0.32 -0.34
26 AT2G42990 GDSL-like Lipase/Acylhydrolase superfamily protein 0.68 0.31 -0.33
27 AT1G78450 SOUL heme-binding family protein 0.67 0.31 -0.33
28 AT3G48970 Heavy metal transport/detoxification superfamily protein 0.67 0.31 -0.33
29 AT5G53880 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, plasma membrane; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.67 0.32 -0.31
30 AT5G67250 SKP1/ASK1-interacting protein 2 SKP1/ASK1-interacting protein 2,
VIER F-BOX PROTEINE 4		 -0.67 0.3 -0.33
31 AT4G18460 D-Tyr-tRNA(Tyr) deacylase family protein 0.67 0.33 -0.33
32 AT5G48380 BAK1-interacting receptor-like kinase 1 BAK1-interacting receptor-like
kinase 1		 -0.67 0.3 -0.32
33 AT5G19560 ROP uanine nucleotide exchange factor 10 ARABIDOPSIS THALIANA ROP UANINE
NUCLEOTIDE EXCHANGE FACTOR 10, ROP
uanine nucleotide exchange factor
10		 0.67 0.31 -0.34
34 AT3G15010 RNA-binding (RRM/RBD/RNP motifs) family protein 0.66 0.32 -0.37
35 AT1G04590 BEST Arabidopsis thaliana protein match is:
Pentatricopeptide repeat (PPR) superfamily protein
(TAIR:AT4G21190.1); Has 111 Blast hits to 111 proteins in
15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 109; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 0.66 0.31 -0.28
36 AT3G05880 Low temperature and salt responsive protein family RARE-COLD-INDUCIBLE 2A -0.66 0.29 -0.32
37 AT5G05410 DRE-binding protein 2A DEHYDRATION-RESPONSIVE ELEMENT
BINDING PROTEIN 2, DRE-binding
protein 2A		 -0.66 0.33 -0.31
38 AT3G08580 ADP/ATP carrier 1 ADP/ATP carrier 1 0.66 0.33 -0.34
39 AT3G56880 VQ motif-containing protein -0.66 0.32 -0.32
40 AT1G20410 Pseudouridine synthase family protein 0.66 0.33 -0.32
41 AT5G16550 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.66 0.32 -0.32
42 AT4G36900 related to AP2 10 DREB AND EAR MOTIF PROTEIN 4,
related to AP2 10		 -0.65 0.31 -0.31
43 AT5G12930 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.65 0.33 -0.32
44 AT4G32840 phosphofructokinase 6 phosphofructokinase 6 0.65 0.34 -0.32
45 AT4G36880 cysteine proteinase1 cysteine proteinase1 0.65 0.33 -0.3
46 AT3G50970 dehydrin family protein LOW TEMPERATURE-INDUCED 30, XERO2 -0.65 0.32 -0.34
47 AT4G21560 vacuolar protein sorting-associated protein 28 homolog 1 vacuolar protein sorting 28,
vacuolar protein
sorting-associated protein 28
homolog 1		 -0.65 0.31 -0.33
48 AT3G10540 3-phosphoinositide-dependent protein kinase 0.65 0.31 -0.32
49 AT1G22890 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 19 plant structures;
EXPRESSED DURING: 11 growth stages; Has 17 Blast hits to 17
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 17; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.64 0.3 -0.32
50 AT3G10020 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: response to oxidative stress, anaerobic
respiration; LOCATED IN: cellular_component unknown;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
growth stages; Has 47 Blast hits to 47 proteins in 12
species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0;
Plants - 46; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.64 0.32 -0.3
51 AT1G60190 ARM repeat superfamily protein AtPUB19, plant U-box 19 -0.64 0.35 -0.31
52 AT1G12100 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.64 0.31 -0.29
53 AT2G42610 Protein of unknown function (DUF640) LIGHT SENSITIVE HYPOCOTYLS 10 0.64 0.33 -0.3
54 AT5G57560 Xyloglucan endotransglucosylase/hydrolase family protein Touch 4, xyloglucan
endotransglucosylase/hydrolase 22		 -0.64 0.3 -0.29
55 AT3G47980 Integral membrane HPP family protein 0.64 0.3 -0.33
56 AT3G10410 SERINE CARBOXYPEPTIDASE-LIKE 49 CARBOXYPEPTIDASE Y, SERINE
CARBOXYPEPTIDASE-LIKE 49		 -0.64 0.32 -0.31
57 AT5G01880 RING/U-box superfamily protein -0.64 0.32 -0.31
58 AT5G20050 Protein kinase superfamily protein 0.64 0.33 -0.3
59 AT3G58990 isopropylmalate isomerase 1 isopropylmalate isomerase 1 0.63 0.29 -0.28
60 AT4G39840 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; Has 20719 Blast hits to
6096 proteins in 607 species: Archae - 22; Bacteria - 3243;
Metazoa - 4364; Fungi - 2270; Plants - 237; Viruses - 128;
Other Eukaryotes - 10455 (source: NCBI BLink).		 0.63 0.3 -0.33
61 AT2G31955 cofactor of nitrate reductase and xanthine dehydrogenase 2 cofactor of nitrate reductase and
xanthine dehydrogenase 2		 -0.63 0.31 -0.33
62 AT4G18880 heat shock transcription factor A4A ARABIDOPSIS THALIANA HEAT SHOCK
TRANSCRIPTION FACTOR A4A, heat
shock transcription factor A4A		 -0.63 0.29 -0.29
63 AT1G01140 CBL-interacting protein kinase 9 CBL-interacting protein kinase 9,
PROTEIN KINASE 6, SNF1-RELATED
PROTEIN KINASE 3.12		 -0.61 0.31 -0.32
64 AT2G23120 Late embryogenesis abundant protein, group 6 -0.61 0.34 -0.32
65 AT4G29600 Cytidine/deoxycytidylate deaminase family protein -0.61 0.31 -0.31
66 AT4G33980 BEST Arabidopsis thaliana protein match is: cold regulated
gene 27 (TAIR:AT5G42900.2); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.6 0.29 -0.3
67 AT1G67970 heat shock transcription factor A8 AT-HSFA8, heat shock transcription
factor A8		 -0.6 0.34 -0.33
68 AT4G28703 RmlC-like cupins superfamily protein -0.6 0.3 -0.32
69 AT2G22500 uncoupling protein 5 PLANT UNCOUPLING MITOCHONDRIAL
PROTEIN 5, DICARBOXYLATE CARRIER
1, uncoupling protein 5		 -0.6 0.3 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
70 C0225 Raffinose D-(+)-Raffinose Raffinose ajugose biosynthesis II (galactinol-independent),
stachyose biosynthesis,
stachyose degradation 		-0.79 0.47 -0.46 C0225