AT3G24260 : -
Query Information
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AGICode AT3G24260
Description FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Histone deacetylase interacting (InterPro:IPR013194); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G28870.1); Has 220 Blast hits to 218 proteins in 65 species: Archae - 7; Bacteria - 6; Metazoa - 43; Fungi - 2; Plants - 115; Viruses - 0; Other Eukaryotes - 47 (source: NCBI BLink).
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G24260 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
CONTAINS InterPro DOMAIN/s: Histone deacetylase interacting
(InterPro:IPR013194); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT3G28870.1); Has 220 Blast
hits to 218 proteins in 65 species: Archae - 7; Bacteria -
6; Metazoa - 43; Fungi - 2; Plants - 115; Viruses - 0;
Other Eukaryotes - 47 (source: NCBI BLink).		 1 0.33 -0.33
2 AT5G26310 UDP-Glycosyltransferase superfamily protein UGT72E3 -0.69 0.33 -0.32
3 AT5G50300 Xanthine/uracil permease family protein ARABIDOPSIS THALIANA AZA-GUANINE
RESISTANT2, AZA-GUANINE RESISTANT2		 -0.65 0.33 -0.32
4 AT1G23640 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN:
petal, leaf whorl, sepal, flower; EXPRESSED DURING: 4
anthesis, petal differentiation and expansion stage;
CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF220 (InterPro:IPR003863); BEST Arabidopsis thaliana
protein match is: Domain of unknown function DUF220
(TAIR:AT1G23660.1); Has 270 Blast hits to 130 proteins in
12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 270; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.64 0.32 -0.34
5 AT2G22930 UDP-Glycosyltransferase superfamily protein -0.63 0.31 -0.33
6 AT5G26140 Putative lysine decarboxylase family protein ATLOG9, LONELY GUY 9 0.62 0.32 -0.31
7 AT5G57420 indole-3-acetic acid inducible 33 indole-3-acetic acid inducible 33 -0.62 0.33 -0.34
8 AT1G13420 sulfotransferase 4B ARABIDOPSIS THALIANA
SULFOTRANSFERASE 4B,
sulfotransferase 4B		 -0.62 0.31 -0.34
9 AT5G13150 exocyst subunit exo70 family protein C1 exocyst subunit exo70 family
protein C1, exocyst subunit exo70
family protein C1		 -0.62 0.3 -0.3
10 AT2G01880 purple acid phosphatase 7 PURPLE ACID PHOSPHATASE 7, purple
acid phosphatase 7		 -0.62 0.3 -0.32
11 AT1G30990 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 -0.61 0.31 -0.32
12 AT2G14630 transposable element gene -0.61 0.31 -0.31
13 AT3G05390 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: mitochondrion;
EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7
growth stages; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF248, methyltransferase putative
(InterPro:IPR004159); BEST Arabidopsis thaliana protein
match is: S-adenosyl-L-methionine-dependent
methyltransferases superfamily protein (TAIR:AT4G01240.1);
Has 507 Blast hits to 498 proteins in 33 species: Archae -
4; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 493;
Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).		 -0.61 0.3 -0.32
14 AT2G39430 Disease resistance-responsive (dirigent-like protein)
family protein		 -0.61 0.31 -0.33
15 AT3G30240 transposable element gene 0.6 0.31 -0.33
16 AT2G16970 Major facilitator superfamily protein maternal effect embryo arrest 15 -0.6 0.34 -0.29
17 AT5G14750 myb domain protein 66 myb domain protein 66, myb domain
protein 66, WEREWOLF, WEREWOLF 1		 -0.6 0.31 -0.3
18 AT1G51640 exocyst subunit exo70 family protein G2 exocyst subunit exo70 family
protein G2, exocyst subunit exo70
family protein G2		 -0.6 0.32 -0.3
19 AT3G51680 NAD(P)-binding Rossmann-fold superfamily protein AtSDR2, short-chain
dehydrogenase/reductase 2		 -0.6 0.3 -0.32
20 AT5G27680 RECQ helicase SIM RECQ helicase SIM -0.6 0.31 -0.31
21 AT3G17180 serine carboxypeptidase-like 33 serine carboxypeptidase-like 33 0.59 0.32 -0.33
22 AT3G23960 F-box and associated interaction domains-containing protein 0.59 0.34 -0.32
23 AT2G35770 serine carboxypeptidase-like 28 serine carboxypeptidase-like 28 -0.59 0.31 -0.33
24 AT3G44460 Basic-leucine zipper (bZIP) transcription factor family
protein		 basic leucine zipper transcription
factor 67, DPBF2		 -0.59 0.32 -0.31
25 AT1G69170 Squamosa promoter-binding protein-like (SBP domain)
transcription factor family protein		 -0.58 0.29 -0.32
26 AT4G15300 cytochrome P450, family 702, subfamily A, polypeptide 2 cytochrome P450, family 702,
subfamily A, polypeptide 2		 -0.58 0.31 -0.32
27 AT5G28780 PIF1 helicase 0.58 0.31 -0.33
28 AT1G16970 KU70 homolog ARABIDOPSIS THALIANA KU70 HOMOLOG,
KU70 homolog		 -0.57 0.31 -0.32
29 AT2G20030 RING/U-box superfamily protein -0.57 0.33 -0.33
30 AT1G75930 extracellular lipase 6 extracellular lipase 6 0.57 0.32 -0.33
31 AT3G49820 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G65925.1); Has 23 Blast hits
to 23 proteins in 7 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.57 0.32 -0.3
32 AT1G79700 Integrase-type DNA-binding superfamily protein 0.56 0.3 -0.32
33 AT1G31270 unknown protein; Has 0 Blast hits to 0 proteins in 0
species (source: NCBI BLink).		 -0.56 0.31 -0.31
34 AT3G48960 Ribosomal protein L13e family protein -0.55 0.29 -0.31
35 AT3G50990 Peroxidase superfamily protein -0.55 0.3 -0.31
36 AT3G58740 citrate synthase 1 citrate synthase 1 -0.55 0.32 -0.32
37 AT5G49320 Protein of unknown function (DUF1218) -0.54 0.32 -0.32
38 AT4G07450 transposable element gene 0.54 0.32 -0.32
39 AT2G15720 transposable element gene -0.54 0.32 -0.35
40 AT5G64110 Peroxidase superfamily protein 0.54 0.28 -0.33
41 AT3G57170 N-acetylglucosaminyl transferase component family protein /
Gpi1 family protein		 0.54 0.32 -0.29
42 AT1G16420 metacaspase 8 ARABIDOPSIS THALIANA METACASPASE
8, metacaspase 2e, metacaspase 8,
metacaspase 2e		 -0.54 0.29 -0.33
43 AT1G29020 Calcium-binding EF-hand family protein -0.54 0.32 -0.33
44 AT5G17540 HXXXD-type acyl-transferase family protein -0.54 0.32 -0.3
45 AT5G35760 Beta-galactosidase related protein 0.53 0.3 -0.35
46 AT3G23870 Protein of unknown function (DUF803) -0.53 0.33 -0.31
47 AT3G29600 transposable element gene 0.53 0.33 -0.28
48 AT3G55180 alpha/beta-Hydrolases superfamily protein -0.53 0.3 -0.3
49 AT3G03800 syntaxin of plants 131 ATSYP131, syntaxin of plants 131 -0.53 0.31 -0.3
50 AT3G21170 F-box and associated interaction domains-containing protein -0.53 0.33 -0.31
51 AT1G48390 RNI-like superfamily protein 0.53 0.31 -0.35
52 AT5G10770 Eukaryotic aspartyl protease family protein 0.52 0.31 -0.34
53 AT1G21780 BTB/POZ domain-containing protein 0.51 0.33 -0.31
54 AT1G44510 transposable element gene 0.51 0.31 -0.34
55 AT5G17970 Disease resistance protein (TIR-NBS-LRR class) family 0.51 0.3 -0.32
56 AT2G43270 F-box and associated interaction domains-containing protein 0.51 0.31 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
57 C0188 Nicotine (-)-Nicotine Nicotine - -0.72 0.48 -0.49 C0188
58 C0108 GMP - GMP guanine and guanosine salvage II,
guanosine nucleotides degradation I,
guanosine nucleotides degradation II,
guanine and guanosine salvage III,
purine nucleotides de novo biosynthesis II,
purine nucleotide metabolism (phosphotransfer and nucleotide modification) 		0.61 0.49 -0.42 C0108