AT3G24360 : -
Query Information
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AGICode AT3G24360
Description ATP-dependent caseinolytic (Clp) protease/crotonase family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G24360 ATP-dependent caseinolytic (Clp) protease/crotonase family
protein		 1 0.33 -0.31
2 AT3G14860 NHL domain-containing protein -0.74 0.31 -0.3
3 AT5G09330 NAC domain containing protein 82 NAC domain containing protein 82,
NAC domain containing protein 82,
VND-interacting 1		 -0.7 0.33 -0.33
4 AT1G26850 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.7 0.29 -0.32
5 AT2G42520 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.68 0.32 -0.31
6 AT3G48650 pseudogene, At14a-related protein, similar to At14a
(GI:11994571 and GI:11994573) (Arabidopsis thaliana)		 0.67 0.31 -0.31
7 AT3G42250 transposable element gene 0.67 0.32 -0.34
8 AT3G27785 myb domain protein 118 ATMYB118, myb domain protein 118,
PLANT GROWTH ACTIVATOR 37		 0.66 0.32 -0.3
9 AT2G41960 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G58050.1); Has 11991 Blast
hits to 7260 proteins in 458 species: Archae - 17; Bacteria
- 481; Metazoa - 5028; Fungi - 1325; Plants - 615; Viruses
- 38; Other Eukaryotes - 4487 (source: NCBI BLink).		 -0.65 0.31 -0.29
10 AT4G36630 Vacuolar sorting protein 39 EMBRYO DEFECTIVE 2754 -0.64 0.33 -0.32
11 AT3G26370 O-fucosyltransferase family protein -0.64 0.32 -0.31
12 AT1G01960 SEC7-like guanine nucleotide exchange family protein embryo sac development arrest 10 -0.64 0.3 -0.33
13 AT5G53840 F-box/RNI-like/FBD-like domains-containing protein 0.64 0.34 -0.33
14 AT3G54980 Pentatricopeptide repeat (PPR) superfamily protein -0.64 0.33 -0.32
15 AT5G41400 RING/U-box superfamily protein 0.64 0.31 -0.3
16 AT5G60320 Concanavalin A-like lectin protein kinase family protein 0.63 0.33 -0.31
17 AT3G52640 Zn-dependent exopeptidases superfamily protein -0.63 0.32 -0.3
18 AT2G03630 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G74220.1); Has 126 Blast hits
to 126 proteins in 28 species: Archae - 0; Bacteria - 6;
Metazoa - 7; Fungi - 5; Plants - 87; Viruses - 0; Other
Eukaryotes - 21 (source: NCBI BLink).		 0.63 0.31 -0.32
19 AT4G18180 Pectin lyase-like superfamily protein -0.62 0.32 -0.33
20 AT2G16835 Aquaporin-like superfamily protein -0.61 0.32 -0.35
21 AT1G05550 Protein of unknown function (DUF295) -0.61 0.34 -0.32
22 AT4G27080 PDI-like 5-4 ARABIDOPSIS THALIANA PROTEIN
DISULFIDE ISOMERASE 7, PDI-like
5-4, PROTEIN DISULFIDE ISOMERASE
7, PDI-like 5-4		 -0.61 0.31 -0.33
23 AT2G42090 actin 9 actin 9 -0.61 0.32 -0.33
24 AT1G73400 Pentatricopeptide repeat (PPR) superfamily protein -0.61 0.31 -0.31
25 AT1G51700 DOF zinc finger protein 1 DOF zinc finger protein 1, DOF
zinc finger protein 1		 0.61 0.32 -0.32
26 AT4G20740 Pentatricopeptide repeat (PPR-like) superfamily protein EMBRYO DEFECTIVE 3131 -0.6 0.31 -0.31
27 AT5G39500 GNOM-like 1 ENDOPLASMIC RETICULUM MORPHOLOGY
1, GNOM-like 1		 -0.6 0.3 -0.31
28 AT5G21160 LA RNA-binding protein -0.6 0.32 -0.32
29 AT1G62530 Plant protein of unknown function (DUF863) -0.6 0.3 -0.32
30 AT2G47120 NAD(P)-binding Rossmann-fold superfamily protein 0.6 0.32 -0.31
31 AT1G10950 transmembrane nine 1 AtTMN1, transmembrane nine 1 -0.6 0.31 -0.31
32 AT4G23330 BEST Arabidopsis thaliana protein match is: eukaryotic
translation initiation factor 3A (TAIR:AT4G11420.1); Has 63
Blast hits to 55 proteins in 14 species: Archae - 0;
Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 62; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.6 0.31 -0.33
33 AT4G00660 RNAhelicase-like 8 ATRH8, RNAhelicase-like 8 -0.6 0.31 -0.31
34 AT3G43680 transposable element gene -0.6 0.32 -0.32
35 AT5G14950 golgi alpha-mannosidase II ATGMII, golgi alpha-mannosidase II -0.59 0.36 -0.33
36 AT3G06940 transposable element gene -0.59 0.31 -0.3
37 AT1G59670 glutathione S-transferase TAU 15 glutathione S-transferase TAU 15,
glutathione S-transferase TAU 15		 0.59 0.31 -0.31
38 AT1G01780 GATA type zinc finger transcription factor family protein PLIM2b -0.59 0.31 -0.32
39 AT1G14670 Endomembrane protein 70 protein family -0.59 0.31 -0.33
40 AT5G43670 Sec23/Sec24 protein transport family protein -0.59 0.3 -0.32
41 AT3G30560 transposable element gene 0.59 0.3 -0.31
42 AT4G29090 Ribonuclease H-like superfamily protein -0.59 0.33 -0.3
43 AT1G35220 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; Has 313
Blast hits to 185 proteins in 75 species: Archae - 0;
Bacteria - 0; Metazoa - 200; Fungi - 0; Plants - 67;
Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink).		 -0.59 0.33 -0.32
44 AT1G32840 transposable element gene 0.59 0.31 -0.31
45 AT3G50590 Transducin/WD40 repeat-like superfamily protein -0.58 0.32 -0.34
46 AT4G38200 SEC7-like guanine nucleotide exchange family protein -0.58 0.32 -0.32
47 AT3G24490 Alcohol dehydrogenase transcription factor Myb/SANT-like
family protein		 -0.58 0.31 -0.31
48 AT3G13220 ABC-2 type transporter family protein ATP-binding cassette G26,
AtABCG26, MSR02, WBC27		 -0.58 0.34 -0.33
49 AT2G47660 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.58 0.33 -0.32
50 AT5G66670 Protein of unknown function (DUF677) 0.58 0.33 -0.31
51 AT3G15200 Tetratricopeptide repeat (TPR)-like superfamily protein -0.58 0.29 -0.32
52 AT5G37980 Zinc-binding dehydrogenase family protein 0.58 0.33 -0.32
53 AT1G80070 Pre-mRNA-processing-splicing factor EMBRYO DEFECTIVE 14, EMBRYO
DEFECTIVE 177, EMBRYO DEFECTIVE
33, ABNORMAL SUSPENSOR 2		 -0.58 0.29 -0.31
54 AT2G20625 Protein of unknown function (DUF626) 0.58 0.33 -0.31
55 AT5G09280 Pectin lyase-like superfamily protein 0.57 0.31 -0.3
56 AT1G48940 early nodulin-like protein 6 AtENODL6, early nodulin-like
protein 6		 0.57 0.32 -0.3
57 AT1G16460 rhodanese homologue 2 ARABIDOPSIS THALIANA
MERCAPTOPYRUVATE SULFURTRANSFERASE
2, rhodanese homologue 2,
MERCAPTOPYRUVATE SULFURTRANSFERASE
2, rhodanese homologue 2,
SULFURTRANSFERASE 2,
SULFURTRANSFERASE 2		 0.57 0.33 -0.3
58 AT1G15920 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 -0.57 0.32 -0.33
59 AT2G23250 UDP-glucosyl transferase 84B2 UDP-glucosyl transferase 84B2 -0.57 0.32 -0.31
60 AT1G62020 Coatomer, alpha subunit -0.57 0.32 -0.32
61 AT5G01280 BEST Arabidopsis thaliana protein match is: proline-rich
family protein (TAIR:AT3G09000.1); Has 1807 Blast hits to
1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.57 0.31 -0.33
62 AT3G42340 transposable element gene 0.57 0.33 -0.36
63 AT2G32430 Galactosyltransferase family protein 0.57 0.3 -0.32
64 AT4G20420 Tapetum specific protein TAP35/TAP44 0.57 0.3 -0.3
65 AT1G35647 transposable element gene 0.57 0.32 -0.31
66 AT1G06410 trehalose-phosphatase/synthase 7 trehalose-phosphatase/synthase 7,
ATTPSA, TREHALOSE -6-PHOSPHATASE
SYNTHASE S7,
trehalose-phosphatase/synthase 7		 -0.57 0.3 -0.3
67 AT1G17630 Pentatricopeptide repeat (PPR-like) superfamily protein -0.57 0.32 -0.3
68 AT3G28720 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 25 plant
structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G58100.1); Has 1610 Blast hits to 344 proteins in
85 species: Archae - 0; Bacteria - 567; Metazoa - 95; Fungi
- 71; Plants - 145; Viruses - 0; Other Eukaryotes - 732
(source: NCBI BLink).		 -0.57 0.32 -0.31
69 AT5G15250 FTSH protease 6 ATFTSH6, FTSH protease 6 0.56 0.35 -0.31
70 AT1G79750 NADP-malic enzyme 4 Arabidopsis thaliana NADP-malic
enzyme 4, NADP-malic enzyme 4		 -0.56 0.3 -0.32
71 AT5G42950 GYF domain-containing protein -0.56 0.32 -0.34
72 AT4G30520 Leucine-rich repeat protein kinase family protein SENESCENCE-ASSOCIATED
RECEPTOR-LIKE KINASE		 0.56 0.32 -0.3
73 AT1G12040 leucine-rich repeat/extensin 1 leucine-rich repeat/extensin 1 -0.56 0.32 -0.32
74 AT4G00890 proline-rich family protein 0.56 0.33 -0.33
75 AT1G01990 unknown protein; Has 32 Blast hits to 32 proteins in 6
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.56 0.32 -0.34
76 AT1G52790 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.56 0.3 -0.32
77 AT5G53480 ARM repeat superfamily protein -0.56 0.35 -0.31
78 AT5G60570 Galactose oxidase/kelch repeat superfamily protein -0.56 0.34 -0.29
79 AT5G44880 transposable element gene 0.56 0.33 -0.29
80 AT3G25810 Terpenoid cyclases/Protein prenyltransferases superfamily
protein		 0.55 0.32 -0.34
81 AT1G02450 NIM1-interacting 1 NIMIN-1, NIM1-interacting 1 0.55 0.3 -0.32
82 AT4G05490 RNI-like superfamily protein 0.55 0.32 -0.33
83 AT1G60380 NAC (No Apical Meristem) domain transcriptional regulator
superfamily protein		 0.55 0.33 -0.31
84 AT3G62740 beta glucosidase 7 beta glucosidase 7 0.55 0.31 -0.33
85 AT5G11040 TRS120 AtTRS120, TRS120 -0.55 0.31 -0.33
86 AT1G17070 GC-rich sequence DNA-binding factor-like protein with
Tuftelin interacting domain		 -0.55 0.32 -0.33
87 AT2G16920 ubiquitin-conjugating enzyme 23 PHO2 FAMILY UBIQUITIN CONJUGATION
ENZYME 2, ubiquitin-conjugating
enzyme 23		 -0.55 0.32 -0.3
88 AT5G58120 Disease resistance protein (TIR-NBS-LRR class) family 0.55 0.29 -0.32
89 AT3G60860 SEC7-like guanine nucleotide exchange family protein -0.55 0.31 -0.31
90 AT1G49780 plant U-box 26 plant U-box 26 0.55 0.33 -0.32
91 AT5G50130 NAD(P)-binding Rossmann-fold superfamily protein 0.54 0.31 -0.32
92 AT2G44000 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 0.54 0.32 -0.3
93 AT5G16860 Tetratricopeptide repeat (TPR)-like superfamily protein -0.54 0.32 -0.33
94 AT4G15350 cytochrome P450, family 705, subfamily A, polypeptide 2 cytochrome P450, family 705,
subfamily A, polypeptide 2		 -0.54 0.29 -0.34
95 AT4G09760 Protein kinase superfamily protein 0.54 0.33 -0.32
96 AT3G20030 F-box and associated interaction domains-containing protein 0.54 0.33 -0.31
97 AT2G24800 Peroxidase superfamily protein -0.54 0.31 -0.3
98 AT2G07320 transposable element gene -0.54 0.32 -0.3
99 AT5G46660 protein kinase C-like zinc finger protein -0.54 0.31 -0.32
100 AT2G06630 transposable element gene -0.54 0.31 -0.33
101 AT4G34430 DNA-binding family protein SWITCH/SUCROSE NONFERMENTING 3D,
CHB3		 -0.54 0.31 -0.29
102 AT2G28440 proline-rich family protein -0.54 0.32 -0.32
103 AT3G10650 BEST Arabidopsis thaliana protein match is:
nucleoporin-related (TAIR:AT5G20200.1); Has 61042 Blast
hits to 31782 proteins in 2093 species: Archae - 202;
Bacteria - 16480; Metazoa - 16017; Fungi - 12552; Plants -
1653; Viruses - 629; Other Eukaryotes - 13509 (source: NCBI
BLink).		 AtNUP1, NUP1 -0.54 0.32 -0.33
104 AT2G01610 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 0.54 0.32 -0.33
105 AT5G38440 Plant self-incompatibility protein S1 family 0.54 0.33 -0.32
106 AT3G08980 Peptidase S24/S26A/S26B/S26C family protein -0.54 0.31 -0.31
107 AT2G07705 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G65346.1); Has 2 Blast hits to
2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.54 0.34 -0.31
108 AT3G45460 IBR domain containing protein 0.53 0.3 -0.31
109 AT2G42830 K-box region and MADS-box transcription factor family
protein 		AGAMOUS-like 5, SHATTERPROOF 2 -0.53 0.32 -0.32
110 AT4G24980 nodulin MtN21 /EamA-like transporter family protein -0.53 0.32 -0.33
111 AT4G36070 calcium-dependent protein kinase 18 calcium-dependent protein kinase
18		 -0.53 0.3 -0.32
112 AT5G22410 root hair specific 18 root hair specific 18 -0.53 0.32 -0.32
113 AT1G28590 GDSL-like Lipase/Acylhydrolase superfamily protein 0.53 0.32 -0.31
114 AT1G55325 RNA polymerase II transcription mediators GRAND CENTRAL, MACCHI-BOU 2 -0.53 0.32 -0.33
115 AT4G15230 pleiotropic drug resistance 2 ATP-binding cassette G30, ATPDR2,
pleiotropic drug resistance 2		 -0.53 0.31 -0.32
116 AT5G24440 CTC-interacting domain 13 CTC-interacting domain 13 0.53 0.32 -0.31
117 AT5G05480 Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A
protein		 -0.53 0.31 -0.32
118 AT2G02640 Cysteine/Histidine-rich C1 domain family protein 0.53 0.31 -0.3
119 AT2G33540 C-terminal domain phosphatase-like 3 ATCPL3, C-terminal domain
phosphatase-like 3		 -0.53 0.32 -0.33
120 AT1G09570 phytochrome A FAR RED ELONGATED HYPOCOTYL 2, FAR
RED ELONGATED 1, ELONGATED
HYPOCOTYL 8, phytochrome A		 -0.53 0.32 -0.31
121 AT1G33250 Protein of unknown function (DUF604) -0.53 0.31 -0.33
122 AT1G58390 Disease resistance protein (CC-NBS-LRR class) family 0.52 0.33 -0.35
123 AT5G37990 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.52 0.3 -0.3
124 AT1G50530 BEST Arabidopsis thaliana protein match is:
Calcium-dependent lipid-binding (CaLB domain) family
protein (TAIR:AT1G50570.2); Has 10 Blast hits to 10
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 10; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.52 0.3 -0.3
125 AT5G48950 Thioesterase superfamily protein 0.52 0.34 -0.32
126 AT5G29090 transposable element gene 0.52 0.32 -0.3
127 AT4G27930 unknown protein; Has 4 Blast hits to 4 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.52 0.3 -0.31
128 AT5G09340 Ubiquitin family protein 0.51 0.3 -0.3
129 AT1G55030 RNI-like superfamily protein 0.51 0.33 -0.31
130 AT1G21170 Exocyst complex component SEC5 SEC5B 0.51 0.32 -0.31
131 AT4G33925 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 suppressor of sni1 2 0.5 0.3 -0.32
132 AT5G36960 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.5 0.32 -0.33
133 AT1G75600 Histone superfamily protein 0.5 0.29 -0.29
134 AT4G39756 Galactose oxidase/kelch repeat superfamily protein 0.5 0.34 -0.33
135 AT1G53360 F-box associated ubiquitination effector family protein 0.5 0.31 -0.33
136 AT2G14095 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 7 plant structures; EXPRESSED
DURING: 4 anthesis, C globular stage, petal differentiation
and expansion stage; Has 106 Blast hits to 103 proteins in
21 species: Archae - 0; Bacteria - 5; Metazoa - 0; Fungi -
4; Plants - 87; Viruses - 0; Other Eukaryotes - 10 (source:
NCBI BLink).		 0.5 0.29 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
137 C0126 Isorhamnetin-dirhamnoside - - - -0.77 0.42 -0.43
138 C0127 Isorhamnetin-hexosyl-rhamnoside - - - -0.64 0.42 -0.43
139 C0122 Isohexylglucosinolate - - - -0.59 0.31 -0.3