AGICode | AT3G24400 |
Description | pseudogene, protein kinase family, contains Pfam PF00069: Protein kinase domain; blastp match of 72% identity and 1.7e-148 P-value to GP|13397640|emb|CAC34703.1||AX088876 unnamed protein product {Brassica napus} |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT3G24400 | pseudogene, protein kinase family, contains Pfam PF00069: Protein kinase domain; blastp match of 72% identity and 1.7e-148 P-value to GP|13397640|emb|CAC34703.1||AX088876 unnamed protein product {Brassica napus} |
proline-rich extensin-like receptor kinase 2, proline-rich extensin-like receptor kinase 2 |
1 | 0.33 | -0.31 | ||
2 | AT3G60390 | homeobox-leucine zipper protein 3 | homeobox-leucine zipper protein 3 | -0.67 | 0.32 | -0.32 | ||
3 | AT2G18245 | alpha/beta-Hydrolases superfamily protein | -0.67 | 0.31 | -0.31 | |||
4 | AT3G60210 | GroES-like family protein | -0.66 | 0.32 | -0.3 | |||
5 | AT1G03440 | Leucine-rich repeat (LRR) family protein | -0.66 | 0.32 | -0.32 | |||
6 | AT2G34610 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G30190.1); Has 342 Blast hits to 279 proteins in 74 species: Archae - 0; Bacteria - 7; Metazoa - 76; Fungi - 18; Plants - 51; Viruses - 0; Other Eukaryotes - 190 (source: NCBI BLink). |
0.65 | 0.32 | -0.3 | |||
7 | AT3G11945 | homogentisate prenyltransferase | homogentisate prenyltransferase, homogentisate prenyltransferase, PHYTOENE DESATURATION 2 |
-0.65 | 0.33 | -0.29 | ||
8 | AT3G61260 | Remorin family protein | -0.63 | 0.31 | -0.3 | |||
9 | AT3G17350 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G50290.1); Has 203 Blast hits to 203 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 203; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.62 | 0.32 | -0.32 | |||
10 | AT5G04210 | CCCH-type zinc fingerfamily protein with RNA-binding domain | -0.62 | 0.3 | -0.34 | |||
11 | AT4G32540 | Flavin-binding monooxygenase family protein | YUCCA, YUCCA 1 | -0.62 | 0.3 | -0.33 | ||
12 | AT4G16240 | unknown protein; Has 17010 Blast hits to 4557 proteins in 509 species: Archae - 32; Bacteria - 2889; Metazoa - 6537; Fungi - 648; Plants - 4769; Viruses - 447; Other Eukaryotes - 1688 (source: NCBI BLink). |
0.62 | 0.32 | -0.33 | |||
13 | AT3G12500 | basic chitinase | basic chitinase, B-CHI, CHI-B, basic chitinase, PATHOGENESIS-RELATED 3, PATHOGENESIS-RELATED 3 |
0.61 | 0.32 | -0.32 | ||
14 | AT3G24140 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
FAMA | -0.61 | 0.31 | -0.32 | ||
15 | AT5G03040 | IQ-domain 2 | IQ-domain 2 | -0.61 | 0.3 | -0.3 | ||
16 | AT3G09980 | Family of unknown function (DUF662) | -0.6 | 0.32 | -0.31 | |||
17 | AT4G33520 | P-type ATP-ase 1 | Arabidopsis thaliana heavy metal ATPase 6, HEAVY METAL ATPASE 6, P-type ATP-ase 1 |
-0.6 | 0.3 | -0.33 | ||
18 | AT5G39830 | Trypsin family protein with PDZ domain | DEG8, DEG PROTEASE 8 | -0.6 | 0.3 | -0.31 | ||
19 | AT1G53790 | F-box and associated interaction domains-containing protein | 0.6 | 0.33 | -0.31 | |||
20 | AT5G20060 | alpha/beta-Hydrolases superfamily protein | -0.59 | 0.33 | -0.31 | |||
21 | AT5G51900 | Cytochrome P450 family protein | -0.59 | 0.32 | -0.35 | |||
22 | AT2G30730 | Protein kinase superfamily protein | -0.58 | 0.32 | -0.31 | |||
23 | AT3G14280 | unknown protein; Has 51 Blast hits to 51 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 51; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.58 | 0.32 | -0.33 | |||
24 | AT1G16330 | cyclin b3;1 | cyclin b3;1 | -0.58 | 0.29 | -0.33 | ||
25 | AT4G26330 | Subtilisin-like serine endopeptidase family protein | ATSBT3.18, UNFERTILIZED EMBRYO SAC 17 |
-0.58 | 0.31 | -0.32 | ||
26 | AT2G32450 | Calcium-binding tetratricopeptide family protein | -0.58 | 0.29 | -0.34 | |||
27 | AT4G36530 | alpha/beta-Hydrolases superfamily protein | -0.56 | 0.3 | -0.31 | |||
28 | AT1G77655 | unknown protein; Has 3 Blast hits to 3 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.56 | 0.35 | -0.31 | |||
29 | AT3G14360 | alpha/beta-Hydrolases superfamily protein | 0.56 | 0.31 | -0.33 | |||
30 | AT1G51910 | Leucine-rich repeat protein kinase family protein | -0.56 | 0.31 | -0.31 | |||
31 | AT3G27810 | myb domain protein 21 | myb domain protein 21, ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 3, myb domain protein 21 |
0.55 | 0.3 | -0.32 | ||
32 | AT3G60410 | Protein of unknown function (DUF1639) | -0.55 | 0.31 | -0.31 | |||
33 | AT1G56010 | NAC domain containing protein 1 | Arabidopsis NAC domain containing protein 21, Arabidopsis NAC domain containing protein 22, NAC domain containing protein 1 |
0.55 | 0.32 | -0.33 | ||
34 | AT5G62500 | end binding protein 1B | ATEB1, END BINDING PROTEIN 1B, end binding protein 1B |
-0.55 | 0.31 | -0.33 | ||
35 | AT2G17340 | Uncharacterised conserved protein (UCP030210) | -0.55 | 0.33 | -0.32 | |||
36 | AT5G59305 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.55 | 0.32 | -0.29 | |||
37 | AT4G32190 | Myosin heavy chain-related protein | -0.55 | 0.32 | -0.31 | |||
38 | AT5G60320 | Concanavalin A-like lectin protein kinase family protein | -0.54 | 0.31 | -0.29 | |||
39 | AT3G42590 | transposable element gene | -0.54 | 0.31 | -0.31 | |||
40 | AT5G02390 | Protein of unknown function (DUF3741) | DUO1-activated unknown 1 | -0.54 | 0.32 | -0.32 | ||
41 | AT3G01680 | CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med28 (InterPro:IPR021640); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01670.1); Has 122 Blast hits to 112 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 122; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
sieve element occlusion b, Sieve-Element-Occlusion-Related 1 |
-0.54 | 0.32 | -0.31 | ||
42 | AT1G13680 | PLC-like phosphodiesterases superfamily protein | 0.54 | 0.34 | -0.3 | |||
43 | AT3G26060 | Thioredoxin superfamily protein | ATPRX Q, peroxiredoxin Q | -0.54 | 0.32 | -0.33 | ||
44 | AT2G20870 | cell wall protein precursor, putative | -0.54 | 0.28 | -0.29 | |||
45 | AT1G67510 | Leucine-rich repeat protein kinase family protein | -0.54 | 0.33 | -0.31 | |||
46 | AT5G05480 | Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A protein |
0.53 | 0.32 | -0.3 | |||
47 | AT5G43780 | Pseudouridine synthase/archaeosine transglycosylase-like family protein |
APS4 | 0.52 | 0.31 | -0.33 | ||
48 | AT5G08510 | Pentatricopeptide repeat (PPR) superfamily protein | 0.5 | 0.34 | -0.32 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
49 | C0253 | Threonic acid-1,4-lactone | D,L-Threonic acid-1,4-lactone | - | - | -0.72 | 0.46 | -0.44 | ||
50 | C0019 | 1-O-β-Glucopyranosylsinapic acid | 1-O-β-D-Glucopyranosylsinapic acid | - | phenylpropanoid pathwayl, lignin biosynthesis |
-0.64 | 0.43 | -0.46 | ||
51 | C0138 | Linarin | - | - | - | -0.61 | 0.47 | -0.46 | ||
52 | C0024 | 2-(Anilinomethyl)pyrrolidine | (S)-(+)-2-(anilinomethyl)pyrrolidine | - | - | -0.57 | 0.46 | -0.44 |