AT3G13140 : -
Query Information
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AGICode AT3G13140
Description hydroxyproline-rich glycoprotein family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G13140 hydroxyproline-rich glycoprotein family protein 1 0.31 -0.32
2 AT3G44330 INVOLVED IN: protein processing; LOCATED IN: mitochondrion,
endoplasmic reticulum, plasma membrane, vacuole; EXPRESSED
IN: 25 plant structures; EXPRESSED DURING: 13 growth
stages; CONTAINS InterPro DOMAIN/s: Nicalin
(InterPro:IPR016574), EF-Hand 1, calcium-binding site
(InterPro:IPR018247), Nicastrin (InterPro:IPR008710); Has
245 Blast hits to 243 proteins in 99 species: Archae - 6;
Bacteria - 10; Metazoa - 139; Fungi - 0; Plants - 46;
Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).		 -0.68 0.32 -0.32
3 AT1G59760 RNA helicase, ATP-dependent, SK12/DOB1 protein AtMTR4, homolog of yeast MTR4 -0.68 0.29 -0.31
4 AT3G60760 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.67 0.32 -0.32
5 AT3G49860 ADP-ribosylation factor-like A1B ADP-ribosylation factor-like A1B,
ADP-ribosylation factor-like A1B		 -0.67 0.31 -0.32
6 AT5G65950 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 25 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF1683, C-terminal
(InterPro:IPR012880), Foie gras liver health family 1
(InterPro:IPR021773); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.66 0.32 -0.32
7 AT5G36950 DegP protease 10 DegP protease 10 -0.66 0.3 -0.31
8 AT1G49490 Leucine-rich repeat (LRR) family protein -0.65 0.3 -0.31
9 AT5G39620 RAB GTPase homolog G1 RAB GTPase homolog G1, RAB GTPase
homolog G1		 -0.65 0.31 -0.32
10 AT5G61970 signal recognition particle-related / SRP-related -0.65 0.31 -0.3
11 AT5G58050 SHV3-like 4 Glycerophosphodiester
phosphodiesterase (GDPD) like 6,
SHV3-like 4		 -0.65 0.3 -0.33
12 AT2G18330 AAA-type ATPase family protein -0.64 0.32 -0.29
13 AT5G38910 RmlC-like cupins superfamily protein -0.64 0.31 -0.3
14 AT3G02650 Tetratricopeptide repeat (TPR)-like superfamily protein -0.64 0.3 -0.33
15 AT3G29796 unknown protein; Has 28 Blast hits to 20 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 18; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 9 (source: NCBI
BLink).		 -0.64 0.32 -0.32
16 AT4G31160 DDB1-CUL4 associated factor 1 DDB1-CUL4 associated factor 1 -0.63 0.3 -0.33
17 AT2G40410 Staphylococcal nuclease homologue 0.63 0.34 -0.33
18 AT3G11450 DnaJ domain ;Myb-like DNA-binding domain -0.63 0.33 -0.29
19 AT4G10730 Protein kinase superfamily protein 0.63 0.32 -0.29
20 AT4G14460 transposable element gene -0.62 0.32 -0.29
21 AT5G38260 Protein kinase superfamily protein -0.62 0.34 -0.3
22 AT5G02310 proteolysis 6 proteolysis 6 0.62 0.32 -0.33
23 AT4G03930 Plant invertase/pectin methylesterase inhibitor superfamily 0.62 0.29 -0.29
24 AT5G47540 Mo25 family protein -0.62 0.32 -0.31
25 AT1G29880 glycyl-tRNA synthetase / glycine--tRNA ligase -0.62 0.32 -0.3
26 AT4G38200 SEC7-like guanine nucleotide exchange family protein -0.61 0.34 -0.3
27 AT3G43420 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.61 0.34 -0.29
28 AT5G12080 mechanosensitive channel of small conductance-like 10 ATMSL10, mechanosensitive channel
of small conductance-like 10		 -0.61 0.31 -0.31
29 AT1G55820 Kinase-related protein of unknown function (DUF1296) -0.61 0.31 -0.34
30 AT3G06040 Ribosomal protein L12/ ATP-dependent Clp protease adaptor
protein ClpS family protein		 -0.6 0.31 -0.34
31 AT5G27220 Frigida-like protein -0.6 0.35 -0.33
32 AT4G13750 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
family protein		 EMBRYO DEFECTIVE 2597, NO VEIN -0.6 0.34 -0.3
33 AT3G22980 Ribosomal protein S5/Elongation factor G/III/V family
protein		 -0.6 0.33 -0.33
34 AT3G13130 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: male gametophyte; Has
140 Blast hits to 132 proteins in 41 species: Archae - 2;
Bacteria - 4; Metazoa - 29; Fungi - 20; Plants - 51;
Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink).		 0.6 0.31 -0.33
35 AT3G30720 qua-quine starch QUA-QUINE STARCH 0.6 0.31 -0.33
36 AT1G17040 SH2 domain protein A ARABIDOPSIS THALIANA SH2 DOMAIN
PROTEIN A, SH2 domain protein A,
STAT-TYPE LINKER-SH2 DOMAIN FACTOR
A		 0.6 0.32 -0.31
37 AT2G29800 Galactose oxidase/kelch repeat superfamily protein -0.59 0.32 -0.31
38 AT2G04000 transposable element gene 0.59 0.32 -0.32
39 AT4G35500 Protein kinase superfamily protein -0.59 0.31 -0.29
40 AT2G10440 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G15780.1); Has 8319 Blast hits
to 5104 proteins in 317 species: Archae - 0; Bacteria -
285; Metazoa - 1706; Fungi - 535; Plants - 320; Viruses -
18; Other Eukaryotes - 5455 (source: NCBI BLink).		 -0.59 0.32 -0.29
41 AT3G62020 germin-like protein 10 germin-like protein 10 0.59 0.3 -0.31
42 AT1G22890 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 19 plant structures;
EXPRESSED DURING: 11 growth stages; Has 17 Blast hits to 17
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 17; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.58 0.29 -0.32
43 AT3G24850 Domain of unknown function (DUF313) -0.58 0.31 -0.29
44 AT4G05240 Ubiquitin-like superfamily protein -0.58 0.3 -0.31
45 AT2G19330 plant intracellular ras group-related LRR 6 plant intracellular ras
group-related LRR 6		 0.58 0.29 -0.32
46 AT5G35640 Putative endonuclease or glycosyl hydrolase -0.58 0.32 -0.31
47 AT5G20200 nucleoporin-related -0.58 0.31 -0.3
48 AT5G35150 transposable element gene -0.58 0.29 -0.31
49 AT3G17630 cation/H+ exchanger 19 cation/H+ exchanger 19, cation/H+
exchanger 19		 -0.58 0.31 -0.3
50 AT5G19640 Major facilitator superfamily protein 0.57 0.31 -0.31
51 AT4G20370 PEBP (phosphatidylethanolamine-binding protein) family
protein		 TWIN SISTER OF FT -0.57 0.33 -0.33
52 AT1G66110 Family of unknown function (DUF577) -0.57 0.33 -0.34
53 AT2G30430 unknown protein; Has 3 Blast hits to 3 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.57 0.29 -0.33
54 AT4G30660 Low temperature and salt responsive protein family 0.57 0.31 -0.33
55 AT4G14850 Pentatricopeptide repeat (PPR) superfamily protein lovastatin insensitive 1, MEF11 -0.56 0.32 -0.33
56 AT3G24460 Serinc-domain containing serine and sphingolipid
biosynthesis protein		 -0.56 0.33 -0.32
57 AT1G69120 K-box region and MADS-box transcription factor family
protein 		AGAMOUS-like 7, APETALA1 -0.56 0.3 -0.29
58 AT2G11150 transposable element gene -0.56 0.29 -0.31
59 AT5G64905 elicitor peptide 3 precursor elicitor peptide 3 precursor -0.56 0.34 -0.35
60 AT4G27400 Late embryogenesis abundant (LEA) protein-related -0.56 0.33 -0.32
61 AT5G52770 Copper transport protein family -0.56 0.32 -0.3
62 AT5G34460 transposable element gene 0.55 0.32 -0.32
63 AT5G28090 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.55 0.32 -0.31
64 AT3G42100 transposable element gene -0.55 0.33 -0.31
65 AT3G20280 RING/FYVE/PHD zinc finger superfamily protein -0.55 0.31 -0.32
66 AT5G46210 cullin4 ATCUL4, cullin4 -0.55 0.33 -0.31
67 AT1G60500 Dynamin related protein 4C Dynamin related protein 4C 0.55 0.3 -0.33
68 AT5G08305 Pentatricopeptide repeat (PPR) superfamily protein -0.55 0.33 -0.3
69 AT2G43690 Concanavalin A-like lectin protein kinase family protein -0.55 0.31 -0.33
70 AT5G58010 LJRHL1-like 3 LJRHL1-like 3 -0.55 0.34 -0.31
71 AT2G42240 RNA-binding (RRM/RBD/RNP motifs) family protein 0.55 0.29 -0.31
72 AT5G01440 BEST Arabidopsis thaliana protein match is: Insulinase
(Peptidase family M16) family protein (TAIR:AT1G06900.1);
Has 1807 Blast hits to 1807 proteins in 277 species: Archae
- 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants -
385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI
BLink).		 0.55 0.31 -0.31
73 AT1G53640 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 20 plant structures;
EXPRESSED DURING: 11 growth stages; Has 1186 Blast hits to
678 proteins in 89 species: Archae - 0; Bacteria - 50;
Metazoa - 731; Fungi - 92; Plants - 226; Viruses - 4; Other
Eukaryotes - 83 (source: NCBI BLink).		 -0.54 0.33 -0.31
74 AT4G25330 unknown protein; Has 21 Blast hits to 21 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.54 0.32 -0.31
75 AT1G67220 histone acetyltransferase of the CBP family 2 ARABIDOPSIS THALIANA P300/CBP
ACETYLTRANSFERASE-RELATED PROTEIN
1, HAC02, histone
acetyltransferase of the CBP
family 2		 -0.54 0.32 -0.29
76 AT5G57260 cytochrome P450, family 71, subfamily B, polypeptide 10 cytochrome P450, family 71,
subfamily B, polypeptide 10		 0.54 0.32 -0.33
77 AT1G79750 NADP-malic enzyme 4 Arabidopsis thaliana NADP-malic
enzyme 4, NADP-malic enzyme 4		 -0.54 0.31 -0.31
78 AT2G20620 Protein of unknown function (DUF626) 0.54 0.32 -0.3
79 AT1G52560 HSP20-like chaperones superfamily protein 0.54 0.32 -0.3
80 AT5G52360 actin depolymerizing factor 10 actin depolymerizing factor 10 0.54 0.32 -0.32
81 AT1G13410 Tetratricopeptide repeat (TPR)-like superfamily protein -0.54 0.3 -0.31
82 AT1G36110 transposable element gene -0.54 0.32 -0.32
83 AT3G42400 transposable element gene 0.53 0.32 -0.31
84 AT1G28327 unknown protein; Has 52 Blast hits to 52 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 52; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.53 0.32 -0.33
85 AT1G72150 PATELLIN 1 PATELLIN 1 0.52 0.29 -0.32
86 AT5G24750 UDP-Glycosyltransferase superfamily protein 0.52 0.32 -0.32
87 AT2G18610 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.51 0.3 -0.31
88 AT5G14560 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.51 0.32 -0.33
89 AT3G24750 unknown protein; Has 25 Blast hits to 25 proteins in 12
species: Archae - 0; Bacteria - 8; Metazoa - 2; Fungi - 0;
Plants - 15; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.51 0.3 -0.33
90 AT1G40150 transposable element gene 0.51 0.31 -0.32
91 AT4G16890 disease resistance protein (TIR-NBS-LRR class), putative BALL, SUPPRESSOR OF NPR1-1,
CONSTITUTIVE 1		 0.5 0.31 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
92 C0109 Guanine - Guanine guanine and guanosine salvage II,
guanosine nucleotides degradation II 		0.7 0.47 -0.45 C0109
93 C0196 Phosphatidylcholine-34:3 - Phosphatidylcholine-34:3 choline biosynthesis III,
diacylglycerol biosynthesis,
phospholipases,
triacylglycerol biosynthesis,
linoleate biosynthesis I,
phosphatidylcholine biosynthesis III,
glutathione redox reactions I 		0.59 0.47 -0.45 C0196
94 C0219 Pyroglutamic acid (2R,2S)-Pyroglutamic acid 5-Oxoproline gamma-glutamyl cycle (plant pathway),
gamma-glutamyl cycle 		0.52 0.31 -0.32 C0219