AT3G13120 : -
Query Information
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AGICode AT3G13120
Description Ribosomal protein S10p/S20e family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G13120 Ribosomal protein S10p/S20e family protein 1 0.33 -0.31
2 AT1G07320 ribosomal protein L4 EMBRYO DEFECTIVE 2784, ribosomal
protein L4		 0.98 0.32 -0.33
3 AT1G48350 Ribosomal L18p/L5e family protein EMBRYO DEFECTIVE 3105 0.98 0.32 -0.32
4 AT2G33800 Ribosomal protein S5 family protein EMBRYO DEFECTIVE 3113 0.97 0.3 -0.33
5 AT3G54210 Ribosomal protein L17 family protein 0.96 0.34 -0.32
6 AT5G11480 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.96 0.31 -0.32
7 AT5G65220 Ribosomal L29 family protein 0.96 0.3 -0.33
8 AT3G25920 ribosomal protein L15 ribosomal protein L15 0.96 0.33 -0.31
9 AT1G53520 Chalcone-flavanone isomerase family protein 0.96 0.32 -0.3
10 AT1G68590 Ribosomal protein PSRP-3/Ycf65 0.96 0.31 -0.31
11 AT5G14320 Ribosomal protein S13/S18 family EMBRYO DEFECTIVE 3137 0.96 0.32 -0.31
12 AT1G64510 Translation elongation factor EF1B/ribosomal protein S6
family protein		 0.96 0.29 -0.33
13 AT5G58250 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
thylakoid, chloroplast; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 14 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF2488
(InterPro:IPR019616); Has 1807 Blast hits to 1807 proteins
in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736;
Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes -
339 (source: NCBI BLink).		 EMBRYO DEFECTIVE 3143 0.95 0.31 -0.31
14 AT3G28460 methyltransferases 0.95 0.34 -0.31
15 AT1G32990 plastid ribosomal protein l11 plastid ribosomal protein l11 0.95 0.34 -0.33
16 AT2G40490 Uroporphyrinogen decarboxylase HEME2 0.95 0.33 -0.31
17 AT3G15190 chloroplast 30S ribosomal protein S20, putative 0.95 0.32 -0.31
18 AT5G08280 hydroxymethylbilane synthase hydroxymethylbilane synthase 0.95 0.32 -0.32
19 AT3G08920 Rhodanese/Cell cycle control phosphatase superfamily
protein		 0.95 0.33 -0.32
20 AT1G05190 Ribosomal protein L6 family embryo defective 2394 0.95 0.31 -0.31
21 AT2G26930 4-(cytidine 5'-phospho)-2-C-methyl-D-erithritol kinase 4-(cytidine
5'-phospho)-2-C-methyl-D-erithrito
l kinase, 4-(cytidine
5'-phospho)-2-C-methyl-D-erithrito
l kinase, 4-(cytidine
5′-diphospho)-2-C-methyl-d-e
rythritol kinase, 4-(cytidine
5′-diphospho)-2-C-methyl-d-e
rythritol kinase, ISPE, PIGMENT
DEFECTIVE 277		 0.95 0.31 -0.31
22 AT3G52150 RNA-binding (RRM/RBD/RNP motifs) family protein 0.95 0.3 -0.34
23 AT2G29180 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 34
Blast hits to 33 proteins in 16 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 33; Viruses
- 0; Other Eukaryotes - 1 (source: NCBI BLink).		 0.94 0.31 -0.34
24 AT2G40690 NAD-dependent glycerol-3-phosphate dehydrogenase family
protein		 GLY1, SUPPRESSOR OF FATTY ACID
DESATURASE DEFICIENCY 1		 0.94 0.31 -0.3
25 AT5G14910 Heavy metal transport/detoxification superfamily protein 0.94 0.33 -0.31
26 AT4G09650 ATP synthase delta-subunit gene ATP synthase delta-subunit gene,
PIGMENT DEFECTIVE 332		 0.94 0.31 -0.32
27 AT2G33450 Ribosomal L28 family 0.94 0.33 -0.32
28 AT5G47190 Ribosomal protein L19 family protein 0.94 0.31 -0.33
29 AT3G48730 glutamate-1-semialdehyde 2,1-aminomutase 2 glutamate-1-semialdehyde
2,1-aminomutase 2		 0.94 0.33 -0.32
30 AT4G21280 photosystem II subunit QA PHOTOSYSTEM II SUBUNIT Q,
PHOTOSYSTEM II SUBUNIT Q-1,
photosystem II subunit QA		 0.94 0.32 -0.31
31 AT1G01080 RNA-binding (RRM/RBD/RNP motifs) family protein 0.94 0.3 -0.3
32 AT1G78630 Ribosomal protein L13 family protein embryo defective 1473 0.94 0.3 -0.31
33 AT1G14270 CAAX amino terminal protease family protein 0.94 0.31 -0.31
34 AT3G20230 Ribosomal L18p/L5e family protein 0.94 0.32 -0.31
35 AT2G37660 NAD(P)-binding Rossmann-fold superfamily protein 0.94 0.32 -0.32
36 AT2G18710 SECY homolog 1 SECY homolog 1 0.94 0.3 -0.3
37 AT5G52970 thylakoid lumen 15.0 kDa protein 0.94 0.32 -0.31
38 AT1G79850 ribosomal protein S17 CS17, PIGMENT DEFECTIVE 347,
PLASTID RIBOSOMAL SMALL SUBUNIT
PROTEIN 17, ribosomal protein S17		 0.94 0.32 -0.3
39 AT5G52960 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF3143 (InterPro:IPR021489);
Has 1807 Blast hits to 1807 proteins in 277 species: Archae
- 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants -
385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI
BLink).		 0.93 0.31 -0.3
40 AT1G55370 NDH-dependent cyclic electron flow 5 NDH-dependent cyclic electron flow
5		 0.93 0.33 -0.31
41 AT3G55040 glutathione transferase lambda 2 glutathione transferase lambda 2 0.93 0.34 -0.32
42 AT2G35500 shikimate kinase like 2 shikimate kinase-like 2 0.93 0.33 -0.32
43 AT4G18480 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 CHLORINA 42, CHLORINA 42, CHL11,
CHLI-1, CHLI1		 0.93 0.33 -0.28
44 AT5G13510 Ribosomal protein L10 family protein EMBRYO DEFECTIVE 3136 0.93 0.31 -0.29
45 AT3G56910 plastid-specific 50S ribosomal protein 5 plastid-specific 50S ribosomal
protein 5		 0.93 0.31 -0.32
46 AT3G05600 alpha/beta-Hydrolases superfamily protein 0.93 0.33 -0.33
47 AT5G45680 FK506-binding protein 13 FK506 BINDING PROTEIN 13,
FK506-binding protein 13		 0.93 0.29 -0.31
48 AT5G14660 peptide deformylase 1B ATDEF2, DEF2, peptide deformylase
1B		 0.93 0.29 -0.28
49 AT1G35680 Ribosomal protein L21 chloroplast ribosomal protein L21 0.93 0.33 -0.29
50 AT3G14930 Uroporphyrinogen decarboxylase HEME1 0.93 0.33 -0.32
51 AT5G57930 Arabidopsis thaliana protein of unknown function (DUF794) ACCUMULATION OF PHOTOSYSTEM ONE 2,
embryo defective 1629		 0.93 0.31 -0.31
52 AT1G75350 Ribosomal protein L31 embryo defective 2184 0.93 0.31 -0.28
53 AT1G32470 Single hybrid motif superfamily protein 0.93 0.33 -0.31
54 AT4G38160 Mitochondrial transcription termination factor family
protein		 pigment defective 191 0.93 0.33 -0.33
55 AT2G43030 Ribosomal protein L3 family protein 0.93 0.32 -0.32
56 AT3G53900 uracil phosphoribosyltransferase PYRIMIDINE R, uracil
phosphoribosyltransferase		 0.93 0.31 -0.31
57 AT2G42220 Rhodanese/Cell cycle control phosphatase superfamily
protein		 0.93 0.3 -0.3
58 AT4G15510 Photosystem II reaction center PsbP family protein 0.93 0.31 -0.32
59 AT3G44890 ribosomal protein L9 ribosomal protein L9 0.93 0.3 -0.3
60 AT1G14030 Rubisco methyltransferase family protein 0.93 0.32 -0.3
61 AT1G67740 photosystem II BY photosystem II BY, YCF32 0.93 0.32 -0.33
62 AT3G04790 Ribose 5-phosphate isomerase, type A protein EMBRYO DEFECTIVE 3119 0.92 0.32 -0.3
63 AT4G34290 SWIB/MDM2 domain superfamily protein 0.92 0.31 -0.32
64 AT1G67700 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; Has 49
Blast hits to 49 proteins in 20 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses
- 0; Other Eukaryotes - 5 (source: NCBI BLink).		 0.92 0.32 -0.32
65 AT4G27600 pfkB-like carbohydrate kinase family protein GENES NECESSARY FOR THE
ACHIEVEMENT OF RUBISCO
ACCUMULATION 5		 0.92 0.31 -0.29
66 AT3G12930 Lojap-related protein 0.92 0.33 -0.31
67 AT3G01480 cyclophilin 38 ARABIDOPSIS CYCLOPHILIN 38,
cyclophilin 38		 0.92 0.33 -0.33
68 AT2G03420 unknown protein; Has 38 Blast hits to 38 proteins in 17
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.92 0.31 -0.31
69 AT3G23700 Nucleic acid-binding proteins superfamily 0.92 0.31 -0.32
70 AT1G08540 RNApolymerase sigma subunit 2 ABC1, SIGMA FACTOR 1, SIGMA FACTOR
2, RNA POLYMERASE SIGMA SUBUNIT 1,
RNApolymerase sigma subunit 2,
SIGA, SIGMA FACTOR B		 0.92 0.31 -0.3
71 AT5G45930 magnesium chelatase i2 CHL I2, CHLI-2, magnesium
chelatase i2		 0.92 0.31 -0.33
72 AT1G62780 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 14 growth stages; Has 94
Blast hits to 94 proteins in 35 species: Archae - 6;
Bacteria - 10; Metazoa - 21; Fungi - 2; Plants - 48;
Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).		 0.92 0.32 -0.3
73 AT4G11175 Nucleic acid-binding, OB-fold-like protein 0.92 0.3 -0.33
74 AT3G60370 FKBP-like peptidyl-prolyl cis-trans isomerase family
protein		 0.92 0.32 -0.3
75 AT5G22340 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 58 Blast hits to 58 proteins
in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 57; Viruses - 0; Other Eukaryotes - 1
(source: NCBI BLink).		 0.92 0.32 -0.31
76 AT5G53490 Tetratricopeptide repeat (TPR)-like superfamily protein 0.92 0.3 -0.31
77 AT3G14110 Tetratricopeptide repeat (TPR)-like superfamily protein FLUORESCENT IN BLUE LIGHT 0.92 0.3 -0.29
78 AT4G39620 Tetratricopeptide repeat (TPR)-like superfamily protein A. THALIANA PENTATRICOPEPTIDE
REPEAT 5, EMBRYO DEFECTIVE 2453		 0.92 0.31 -0.33
79 AT4G24930 thylakoid lumenal 17.9 kDa protein, chloroplast 0.92 0.32 -0.32
80 AT4G24750 Rhodanese/Cell cycle control phosphatase superfamily
protein		 0.92 0.3 -0.3
81 AT4G34730 ribosome-binding factor A family protein 0.91 0.31 -0.32
82 AT5G18660 NAD(P)-binding Rossmann-fold superfamily protein PALE-GREEN AND CHLOROPHYLL B
REDUCED 2		 0.91 0.31 -0.3
83 AT1G15820 light harvesting complex photosystem II subunit 6 CP24, light harvesting complex
photosystem II subunit 6		 0.91 0.33 -0.32
84 AT5G51110 Transcriptional coactivator/pterin dehydratase 0.91 0.31 -0.31
85 AT1G17650 glyoxylate reductase 2 glyoxylate reductase 2, GLYOXYLATE
REDUCTASE 2		 0.91 0.33 -0.32
86 AT4G02770 photosystem I subunit D-1 photosystem I subunit D-1 0.91 0.31 -0.32
87 AT1G50900 Ankyrin repeat family protein Grana Deficient Chloroplast 1,
LHCP translocation defect		 0.91 0.29 -0.3
88 AT1G78180 Mitochondrial substrate carrier family protein 0.91 0.3 -0.31
89 AT3G53130 Cytochrome P450 superfamily protein CYTOCHROME P450 97C1, LUTEIN
DEFICIENT 1		 0.91 0.33 -0.33
90 AT5G11450 Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP
family protein		 PsbP domain protein 5 0.91 0.3 -0.32
91 AT5G30510 ribosomal protein S1 ARRPS1, ribosomal protein S1 0.91 0.31 -0.32
92 AT2G20890 photosystem II reaction center PSB29 protein photosystem II reaction center
PSB29 protein, THYLAKOID
FORMATION1		 0.91 0.33 -0.3
93 AT4G20130 plastid transcriptionally active 14 plastid transcriptionally active
14		 0.91 0.31 -0.3
94 AT4G17560 Ribosomal protein L19 family protein 0.91 0.34 -0.32
95 AT3G29185 Domain of unknown function (DUF3598) 0.91 0.34 -0.3
96 AT2G33430 differentiation and greening-like 1 DIFFERENTIATION AND GREENING-LIKE,
differentiation and greening-like
1		 0.91 0.32 -0.31
97 AT1G75690 DnaJ/Hsp40 cysteine-rich domain superfamily protein LOW QUANTUM YIELD OF PHOTOSYSTEM
II 1		 0.91 0.31 -0.3
98 AT1G08520 ALBINA 1 ALB-1V, ALBINA 1, CHLD, PIGMENT
DEFECTIVE EMBRYO 166, V157		 0.91 0.3 -0.32
99 AT4G32260 ATPase, F0 complex, subunit B/B', bacterial/chloroplast PIGMENT DEFECTIVE 334 0.91 0.32 -0.31
100 AT4G14890 2Fe-2S ferredoxin-like superfamily protein ferredoxin C 2 0.91 0.28 -0.31
101 AT4G39040 RNA-binding CRS1 / YhbY (CRM) domain protein 0.91 0.3 -0.31
102 AT1G33040 nascent polypeptide-associated complex subunit alpha-like
protein 5		 nascent polypeptide-associated
complex subunit alpha-like protein
5		 0.91 0.32 -0.33
103 AT1G01970 Tetratricopeptide repeat (TPR)-like superfamily protein 0.91 0.31 -0.29
104 AT1G02280 translocon at the outer envelope membrane of chloroplasts
33		 ATTOC33, PLASTID PROTEIN IMPORT 1,
translocon at the outer envelope
membrane of chloroplasts 33		 0.91 0.32 -0.3
105 AT1G64355 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF3593 (InterPro:IPR021995);
Has 301 Blast hits to 301 proteins in 96 species: Archae -
0; Bacteria - 143; Metazoa - 0; Fungi - 0; Plants - 44;
Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink).		 0.91 0.34 -0.31
106 AT5G16140 Peptidyl-tRNA hydrolase family protein 0.91 0.31 -0.33
107 AT4G30620 Uncharacterised BCR, YbaB family COG0718 0.91 0.33 -0.32
108 AT5G42070 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane, chloroplast; EXPRESSED IN:
21 plant structures; EXPRESSED DURING: 13 growth stages;
Has 30201 Blast hits to 17322 proteins in 780 species:
Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi -
3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996
(source: NCBI BLink).		 0.91 0.3 -0.32
109 AT5G51545 low psii accumulation2 low psii accumulation2 0.91 0.31 -0.32
110 AT5G19620 outer envelope protein of 80 kDa ARABIDOPSIS THALIANA OUTER
ENVELOPE PROTEIN OF 80 KDA, EMBRYO
DEFECTIVE 213, outer envelope
protein of 80 kDa, translocon at
the outer envelope membrane of
chloroplasts 75-V		 0.91 0.33 -0.28
111 AT1G63840 RING/U-box superfamily protein -0.86 0.33 -0.33
112 AT3G10500 NAC domain containing protein 53 NAC domain containing protein 53,
NAC domain containing protein 53		 -0.86 0.32 -0.3
113 AT2G42890 MEI2-like 2 MEI2-like 2, MEI2-like 2 -0.85 0.33 -0.31
114 AT2G41220 glutamate synthase 2 glutamate synthase 2 -0.84 0.32 -0.31
115 AT1G09970 Leucine-rich receptor-like protein kinase family protein LRR XI-23, receptor-like kinase 7 -0.84 0.31 -0.31
116 AT3G45010 serine carboxypeptidase-like 48 serine carboxypeptidase-like 48 -0.82 0.32 -0.31
117 AT4G18360 Aldolase-type TIM barrel family protein -0.82 0.34 -0.31
118 AT1G02850 beta glucosidase 11 beta glucosidase 11 -0.81 0.33 -0.33
119 AT5G48410 glutamate receptor 1.3 ARABIDOPSIS THALIANA GLUTAMATE
RECEPTOR 1.3, glutamate receptor
1.3		 -0.81 0.31 -0.31
120 AT2G41380 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.81 0.32 -0.34
121 AT1G62300 WRKY family transcription factor ATWRKY6, WRKY6 -0.81 0.33 -0.32
122 AT3G25290 Auxin-responsive family protein -0.81 0.33 -0.32
123 AT5G44790 copper-exporting ATPase / responsive-to-antagonist 1 /
copper-transporting ATPase (RAN1)		 HMA7, RESPONSIVE-TO-ANTAGONIST 1 -0.8 0.3 -0.32
124 AT4G37370 cytochrome P450, family 81, subfamily D, polypeptide 8 cytochrome P450, family 81,
subfamily D, polypeptide 8		 -0.79 0.33 -0.32
125 AT2G39350 ABC-2 type transporter family protein ATP-binding cassette G1 -0.78 0.31 -0.31
126 AT1G64060 respiratory burst oxidase protein F respiratory burst oxidase protein
F, ARABIDOPSIS THALIANA
RESPIRATORY BURST OXIDASE HOMOLOG
F, respiratory burst oxidase
protein F, RBOHAP108, RESPIRATORY
BURST OXIDASE PROTEIN F		 -0.78 0.32 -0.31
127 AT3G25610 ATPase E1-E2 type family protein / haloacid
dehalogenase-like hydrolase family protein		 -0.78 0.32 -0.31
128 AT5G16680 RING/FYVE/PHD zinc finger superfamily protein -0.77 0.31 -0.31
129 AT5G18270 Arabidopsis NAC domain containing protein 87 Arabidopsis NAC domain containing
protein 87		 -0.77 0.33 -0.32
130 AT3G16340 pleiotropic drug resistance 1 ATP-binding cassette G29,
PLEIOTROPIC DRUG RESISTANCE 1,
pleiotropic drug resistance 1		 -0.77 0.28 -0.32
131 AT3G57380 Glycosyltransferase family 61 protein -0.77 0.32 -0.3
132 AT4G31240 protein kinase C-like zinc finger protein -0.76 0.31 -0.29
133 AT2G28110 Exostosin family protein FRAGILE FIBER 8, IRREGULAR XYLEM 7 -0.76 0.3 -0.32
134 AT5G02230 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 -0.76 0.33 -0.32
135 AT5G24090 chitinase A chitinase A, chitinase A -0.76 0.32 -0.31
136 AT2G47800 multidrug resistance-associated protein 4 ATP-binding cassette C4, multidrug
resistance-associated protein 4,
EST3, multidrug
resistance-associated protein 4		 -0.76 0.29 -0.32
137 AT5G18310 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G48500.1); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.76 0.3 -0.32
138 AT1G35260 MLP-like protein 165 MLP-like protein 165 -0.75 0.33 -0.29
139 AT4G15610 Uncharacterised protein family (UPF0497) -0.75 0.35 -0.31
140 AT2G29065 GRAS family transcription factor -0.75 0.31 -0.32
141 AT5G18780 F-box/RNI-like superfamily protein -0.75 0.34 -0.31
142 AT5G61450 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.74 0.31 -0.3
143 AT5G65870 phytosulfokine 5 precursor phytosulfokine 5 precursor, PSK5,
phytosulfokine 5 precursor		 -0.74 0.31 -0.31
144 AT4G14010 ralf-like 32 ralf-like 32 -0.73 0.35 -0.32
145 AT5G15730 Protein kinase superfamily protein AtCRLK2,
calcium/calmodulin-regulated
receptor-like kinase 2		 -0.73 0.29 -0.31
146 AT5G59490 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 -0.73 0.32 -0.32