AT3G28140 : -
Query Information
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AGICode AT3G28140
Description RNA ligase/cyclic nucleotide phosphodiesterase family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G28140 RNA ligase/cyclic nucleotide phosphodiesterase family
protein		 1 0.31 -0.33
2 AT5G42180 Peroxidase superfamily protein peroxidase 64 -0.69 0.32 -0.31
3 AT5G27680 RECQ helicase SIM RECQ helicase SIM -0.69 0.31 -0.31
4 AT1G02810 Plant invertase/pectin methylesterase inhibitor superfamily -0.67 0.32 -0.32
5 AT2G36100 Uncharacterised protein family (UPF0497) Casparian strip membrane domain
protein 1		 -0.65 0.32 -0.34
6 AT3G27320 alpha/beta-Hydrolases superfamily protein 0.64 0.35 -0.31
7 AT5G37300 O-acyltransferase (WSD1-like) family protein WSD1 0.63 0.33 -0.32
8 AT3G63360 defensin-related -0.62 0.31 -0.29
9 AT3G59850 Pectin lyase-like superfamily protein -0.62 0.29 -0.3
10 AT5G13830 FtsJ-like methyltransferase family protein -0.62 0.31 -0.32
11 AT2G30670 NAD(P)-binding Rossmann-fold superfamily protein 0.62 0.34 -0.31
12 AT1G54330 NAC domain containing protein 20 NAC domain containing protein 20,
NAC domain containing protein 20		 -0.62 0.32 -0.32
13 AT1G73360 homeodomain GLABROUS 11 HOMEODOMAIN GLABROUS 11, ENHANCED
DROUGHT TOLERANCE 1, homeodomain
GLABROUS 11		 0.62 0.3 -0.33
14 AT4G36170 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.61 0.29 -0.31
15 AT5G60520 Late embryogenesis abundant (LEA) protein-related -0.61 0.31 -0.34
16 AT5G60530 late embryogenesis abundant protein-related / LEA
protein-related		 -0.61 0.32 -0.32
17 AT4G34680 GATA transcription factor 3 GATA transcription factor 3 0.61 0.3 -0.3
18 AT5G01810 CBL-interacting protein kinase 15 PROTEIN KINASE 10, CBL-interacting
protein kinase 15, PKS3,
SOS3-INTERACTING PROTEIN 2,
SNF1-RELATED PROTEIN KINASE 3.1		 0.61 0.34 -0.29
19 AT5G41180 leucine-rich repeat transmembrane protein kinase family
protein		 -0.6 0.31 -0.32
20 AT1G13710 cytochrome P450, family 78, subfamily A, polypeptide 5 cytochrome P450, family 78,
subfamily A, polypeptide 5, KLUH		 0.6 0.33 -0.33
21 AT1G33500 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.6 0.3 -0.32
22 AT3G54000 CONTAINS InterPro DOMAIN/s: Uncharacterised conserved
protein UCP022260 (InterPro:IPR016802); Has 94 Blast hits
to 94 proteins in 14 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 94; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.6 0.31 -0.32
23 AT5G64905 elicitor peptide 3 precursor elicitor peptide 3 precursor -0.6 0.35 -0.33
24 AT2G14800 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G44713.1); Has 41 Blast hits
to 38 proteins in 14 species: Archae - 0; Bacteria - 0;
Metazoa - 7; Fungi - 2; Plants - 16; Viruses - 0; Other
Eukaryotes - 16 (source: NCBI BLink).		 -0.6 0.32 -0.33
25 AT4G28650 Leucine-rich repeat transmembrane protein kinase family
protein		 -0.6 0.33 -0.31
26 AT1G73160 UDP-Glycosyltransferase superfamily protein -0.59 0.3 -0.32
27 AT1G69800 Cystathionine beta-synthase (CBS) protein 0.59 0.32 -0.3
28 AT1G21890 nodulin MtN21 /EamA-like transporter family protein 0.59 0.31 -0.3
29 AT3G29796 unknown protein; Has 28 Blast hits to 20 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 18; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 9 (source: NCBI
BLink).		 -0.59 0.31 -0.29
30 AT5G10130 Pollen Ole e 1 allergen and extensin family protein -0.59 0.32 -0.3
31 AT1G17230 Leucine-rich receptor-like protein kinase family protein 0.58 0.33 -0.32
32 AT3G29080 unknown protein; Has 0 Blast hits to 0 proteins in 0
species (source: NCBI BLink).		 0.58 0.32 -0.32
33 AT5G47810 phosphofructokinase 2 phosphofructokinase 2 0.57 0.3 -0.32
34 AT4G16490 ARM repeat superfamily protein 0.57 0.29 -0.31
35 AT3G13610 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.57 0.33 -0.34
36 AT1G60060 Serine/threonine-protein kinase WNK (With No
Lysine)-related		 0.57 0.33 -0.31
37 AT1G29020 Calcium-binding EF-hand family protein -0.57 0.33 -0.3
38 AT2G44110 Seven transmembrane MLO family protein MILDEW RESISTANCE LOCUS O 15,
MILDEW RESISTANCE LOCUS O 15		 -0.56 0.33 -0.29
39 AT3G49400 Transducin/WD40 repeat-like superfamily protein -0.56 0.32 -0.33
40 AT5G05870 UDP-glucosyl transferase 76C1 UDP-glucosyl transferase 76C1 0.56 0.32 -0.33
41 AT1G31270 unknown protein; Has 0 Blast hits to 0 proteins in 0
species (source: NCBI BLink).		 -0.56 0.28 -0.34
42 AT3G32120 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G31400.1); Has 4 Blast hits to
4 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.56 0.29 -0.33
43 AT1G60985 SCR-like 6 SCR-like 6 0.55 0.33 -0.32
44 AT5G34460 transposable element gene 0.55 0.32 -0.31
45 AT5G61865 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.55 0.31 -0.32
46 AT3G50500 SNF1-related protein kinase 2.2 SNF1-RELATED PROTEIN KINASE 2-2,
SNF1-related protein kinase 2.2,
SNF1-RELATED PROTEIN KINASE 2-2,
SRK2D		 0.55 0.3 -0.33
47 AT5G03920 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G03930.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.54 0.32 -0.3
48 AT5G35090 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.54 0.32 -0.31
49 AT5G07510 glycine-rich protein 14 ARABIDOPSIS THALIANA GLYCINE-RICH
PROTEIN 4, ARABIDOPSIS THALIANA
GLYCINE-RICH PROTEIN 14,
GLYCINE-RICH PROTEIN 4,
glycine-rich protein 14		 -0.54 0.31 -0.31
50 AT5G09640 serine carboxypeptidase-like 19 serine carboxypeptidase-like 19,
SINAPOYLGLUCOSE ACCUMULATOR 2		 0.54 0.31 -0.3
51 AT1G57570 Mannose-binding lectin superfamily protein -0.53 0.31 -0.35
52 AT3G45940 Glycosyl hydrolases family 31 protein -0.53 0.3 -0.33
53 AT2G26960 myb domain protein 81 myb domain protein 81, myb domain
protein 81		 0.53 0.32 -0.32
54 AT3G01620 beta-1,4-N-acetylglucosaminyltransferase family protein 0.53 0.32 -0.32
55 AT3G09640 ascorbate peroxidase 2 ASCORBATE PEROXIDASE 1B, ascorbate
peroxidase 2		 0.53 0.32 -0.32
56 AT5G02900 cytochrome P450, family 96, subfamily A, polypeptide 13 cytochrome P450, family 96,
subfamily A, polypeptide 13		 0.53 0.32 -0.31
57 AT3G42090 transposable element gene -0.52 0.31 -0.34
58 AT4G15630 Uncharacterised protein family (UPF0497) 0.52 0.31 -0.33
59 AT4G19500 nucleoside-triphosphatases;transmembrane
receptors;nucleotide binding;ATP binding		 0.52 0.27 -0.31
60 AT3G15740 RING/U-box superfamily protein -0.52 0.33 -0.32
61 AT3G51690 PIF1 helicase 0.52 0.31 -0.31
62 AT5G38320 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G67050.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.52 0.31 -0.32
63 AT2G29040 Exostosin family protein 0.52 0.31 -0.3
64 AT4G08880 transposable element gene -0.51 0.3 -0.31
65 AT5G35340 transposable element gene 0.51 0.3 -0.3
66 AT1G72840 Disease resistance protein (TIR-NBS-LRR class) -0.51 0.29 -0.33
67 AT2G46960 cytochrome P450, family 709, subfamily B, polypeptide 1 cytochrome P450, family 709,
subfamily B, polypeptide 1		 0.51 0.31 -0.32
68 AT4G28090 SKU5 similar 10 SKU5 similar 10 -0.51 0.31 -0.32