AT3G15590 : -
Query Information
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AGICode AT3G15590
Description Tetratricopeptide repeat (TPR)-like superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G15590 Tetratricopeptide repeat (TPR)-like superfamily protein 1 0.33 -0.31
2 AT1G68540 NAD(P)-binding Rossmann-fold superfamily protein cinnamoyl coA reductase-like 6,
tetraketide alpha-pyrone reductase
2		 -0.79 0.32 -0.31
3 AT2G31060 elongation factor family protein EMBRYO DEFECTIVE 2785 0.78 0.33 -0.3
4 AT1G53645 hydroxyproline-rich glycoprotein family protein 0.77 0.31 -0.34
5 AT5G10310 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 17 plant structures;
EXPRESSED DURING: 10 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G13898.1); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.76 0.33 -0.32
6 AT3G07770 HEAT SHOCK PROTEIN 89.1 HEAT SHOCK PROTEIN 90-6, HEAT
SHOCK PROTEIN 90.6, HEAT SHOCK
PROTEIN 89.1		 0.75 0.33 -0.31
7 AT5G09590 mitochondrial HSO70 2 HEAT SHOCK COGNATE, mitochondrial
HSO70 2		 0.75 0.32 -0.32
8 AT5G16750 Transducin family protein / WD-40 repeat family protein TORMOZEMBRYO DEFECTIVE 0.75 0.31 -0.33
9 AT3G13860 heat shock protein 60-3A heat shock protein 60-3A 0.74 0.31 -0.31
10 AT4G37910 mitochondrial heat shock protein 70-1 mitochondrial heat shock protein
70-1		 0.74 0.31 -0.32
11 AT5G16400 thioredoxin F2 ATF2, thioredoxin F2 -0.74 0.31 -0.31
12 AT5G52540 Protein of unknown function (DUF819) -0.74 0.33 -0.33
13 AT5G40760 glucose-6-phosphate dehydrogenase 6 glucose-6-phosphate dehydrogenase
6		 0.74 0.32 -0.31
14 AT2G24790 CONSTANS-like 3 ATCOL3, CONSTANS-like 3 -0.73 0.3 -0.33
15 AT1G62730 Terpenoid synthases superfamily protein 0.73 0.31 -0.31
16 AT5G09420 translocon at the outer membrane of chloroplasts 64-V AtmtOM64, translocon at the outer
membrane of chloroplasts 64-V,
ARABIDOPSIS THALIANA TRANSLOCON AT
THE OUTER MEMBRANE OF CHLOROPLASTS
64-V, outer membrane 64,
translocon at the outer membrane
of chloroplasts 64-V		 0.73 0.32 -0.29
17 AT1G72030 Acyl-CoA N-acyltransferases (NAT) superfamily protein -0.73 0.31 -0.33
18 AT1G06440 Ubiquitin carboxyl-terminal hydrolase family protein 0.72 0.31 -0.3
19 AT3G27925 DegP protease 1 DegP protease 1, DegP protease 1 -0.72 0.34 -0.31
20 AT5G45140 nuclear RNA polymerase C2 nuclear RNA polymerase C2 0.72 0.31 -0.32
21 AT4G27800 thylakoid-associated phosphatase 38 PROTEIN PHOSPHATASE 1,
thylakoid-associated phosphatase
38		 -0.72 0.3 -0.32
22 AT4G32060 calcium-binding EF hand family protein -0.72 0.3 -0.3
23 AT4G10000 Thioredoxin family protein -0.71 0.28 -0.32
24 AT1G14300 ARM repeat superfamily protein 0.71 0.33 -0.33
25 AT1G17960 Threonyl-tRNA synthetase 0.71 0.34 -0.33
26 AT3G07310 Protein of unknown function (DUF760) -0.71 0.3 -0.31
27 AT1G79790 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 Arabidopsis thaliana chloroplast
FMN hydrolase 1, flavin
mononucleotide hydrolase 1		 -0.71 0.31 -0.32
28 AT3G13460 evolutionarily conserved C-terminal region 2 evolutionarily conserved
C-terminal region 2		 0.71 0.31 -0.31
29 AT1G71210 Pentatricopeptide repeat (PPR) superfamily protein 0.71 0.33 -0.29
30 AT2G35450 catalytics;hydrolases -0.71 0.31 -0.31
31 AT3G28760 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: 3-dehydroquinate
synthase, prokaryotic-type (InterPro:IPR002812); Has 390
Blast hits to 390 proteins in 131 species: Archae - 144;
Bacteria - 105; Metazoa - 0; Fungi - 0; Plants - 54;
Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink).		 -0.71 0.33 -0.34
32 AT5G45040 Cytochrome c cytochrome c6A -0.71 0.31 -0.33
33 AT4G24270 EMBRYO DEFECTIVE 140 EMBRYO DEFECTIVE 140 0.71 0.34 -0.33
34 AT1G76110 HMG (high mobility group) box protein with ARID/BRIGHT
DNA-binding domain		 -0.71 0.34 -0.32
35 AT1G29700 Metallo-hydrolase/oxidoreductase superfamily protein -0.7 0.31 -0.32
36 AT5G16940 carbon-sulfur lyases -0.7 0.32 -0.33
37 AT4G04180 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.7 0.3 -0.3
38 AT5G07240 IQ-domain 24 IQ-domain 24 -0.7 0.32 -0.3
39 AT1G77930 Chaperone DnaJ-domain superfamily protein -0.7 0.31 -0.34
40 AT3G56430 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, vacuole; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT2G40800.1); Has 3121 Blast hits to 1477 proteins in
196 species: Archae - 12; Bacteria - 170; Metazoa - 996;
Fungi - 324; Plants - 132; Viruses - 59; Other Eukaryotes -
1428 (source: NCBI BLink).		 0.7 0.33 -0.34
41 AT3G52155 Phosphoglycerate mutase family protein -0.7 0.32 -0.32
42 AT2G28305 Putative lysine decarboxylase family protein ATLOG1, LONELY GUY 1 -0.7 0.31 -0.34
43 AT2G01140 Aldolase superfamily protein PIGMENT DEFECTIVE 345 0.7 0.32 -0.34
44 AT2G03530 ureide permease 2 ARABIDOPSIS THALIANA UREIDE
PERMEASE 2, ureide permease 2		 -0.7 0.34 -0.3
45 AT3G04580 Signal transduction histidine kinase, hybrid-type, ethylene
sensor		 ETHYLENE INSENSITIVE 4 0.7 0.31 -0.31
46 AT5G14260 Rubisco methyltransferase family protein -0.69 0.32 -0.31
47 AT2G21390 Coatomer, alpha subunit 0.69 0.29 -0.3
48 AT5G09330 NAC domain containing protein 82 NAC domain containing protein 82,
NAC domain containing protein 82,
VND-interacting 1		 0.69 0.31 -0.32
49 AT2G03390 uvrB/uvrC motif-containing protein -0.69 0.33 -0.32
50 AT5G45170 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 -0.69 0.32 -0.3
51 AT5G38360 alpha/beta-Hydrolases superfamily protein -0.69 0.31 -0.32
52 AT5G06460 ubiquitin activating enzyme 2 ARABIDOPSIS THALIANA UBIQUITIN
ACTIVATING ENZYME 2, ubiquitin
activating enzyme 2		 0.69 0.33 -0.31
53 AT1G71050 Heavy metal transport/detoxification superfamily protein heavy metal associated
isoprenylated plant protein 20		 -0.69 0.31 -0.31
54 AT5G14000 NAC domain containing protein 84 NAC domain containing protein 84,
NAC domain containing protein 84		 0.69 0.32 -0.31
55 AT1G08570 atypical CYS HIS rich thioredoxin 4 atypical CYS HIS rich thioredoxin
4		 -0.68 0.32 -0.34
56 AT4G34480 O-Glycosyl hydrolases family 17 protein -0.68 0.34 -0.31
57 AT3G01140 myb domain protein 106 myb domain protein 106, myb domain
protein 106, NOECK		 -0.68 0.3 -0.31
58 AT1G77490 thylakoidal ascorbate peroxidase thylakoidal ascorbate peroxidase -0.68 0.32 -0.31
59 AT5G44390 FAD-binding Berberine family protein 0.68 0.31 -0.32
60 AT5G25800 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 0.68 0.3 -0.33
61 AT2G17440 plant intracellular ras group-related LRR 5 plant intracellular ras
group-related LRR 5		 0.68 0.32 -0.29
62 AT2G31040 ATP synthase protein I -related -0.68 0.32 -0.31
63 AT3G23080 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 -0.68 0.33 -0.31
64 AT2G03880 Pentatricopeptide repeat (PPR) superfamily protein required for efficiency of
mitochondrial editing 1		 0.68 0.3 -0.31
65 AT3G59530 Calcium-dependent phosphotriesterase superfamily protein LESS ADHERENT POLLEN 3 -0.68 0.33 -0.3
66 AT4G33500 Protein phosphatase 2C family protein -0.68 0.3 -0.32
67 AT1G76100 plastocyanin 1 plastocyanin 1 -0.68 0.33 -0.31
68 AT5G54980 Uncharacterised protein family (UPF0497) -0.68 0.31 -0.32
69 AT3G54980 Pentatricopeptide repeat (PPR) superfamily protein 0.68 0.31 -0.31
70 AT4G13150 unknown protein; Has 83 Blast hits to 82 proteins in 37
species: Archae - 0; Bacteria - 51; Metazoa - 0; Fungi - 0;
Plants - 30; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 -0.68 0.31 -0.31
71 AT5G20960 aldehyde oxidase 1 aldehyde oxidase 1, aldehyde
oxidase 1, aldehyde oxidase alpha,
ARABIDOPSIS THALIANA ALDEHYDE
OXIDASE 1, ATAO, Arabidopsis
thaliana aldehyde oxidase 1		 0.68 0.32 -0.32
72 AT1G11390 Protein kinase superfamily protein 0.68 0.32 -0.3
73 AT1G35340 ATP-dependent protease La (LON) domain protein -0.68 0.3 -0.31
74 AT3G17470 Ca2+-activated RelA/spot homolog ATCRSH, Ca2+-activated RelA/spot
homolog		 -0.68 0.31 -0.33
75 AT5G63530 farnesylated protein 3 ARABIDOPSIS THALIANA FARNESYLATED
PROTEIN 3, farnesylated protein 3		 -0.67 0.34 -0.31
76 AT1G66340 Signal transduction histidine kinase, hybrid-type, ethylene
sensor		 AtETR1, ETHYLENE INSENSITIVE 1,
ETHYLENE RESPONSE, ETHYLENE
RESPONSE 1		 0.67 0.33 -0.32
77 AT5G19260 Protein of unknown function (DUF3049) FANTASTIC FOUR 3 -0.67 0.32 -0.31
78 AT1G69390 homologue of bacterial MinE 1 accumulation and replication of
chloroplasts 12, homologue of
bacterial MinE 1, homologue of
bacterial MinE 1		 -0.67 0.32 -0.34
79 AT5G27920 F-box family protein 0.67 0.3 -0.3
80 AT1G08830 copper/zinc superoxide dismutase 1 copper/zinc superoxide dismutase 1 0.67 0.31 -0.32
81 AT5G25630 Tetratricopeptide repeat (TPR)-like superfamily protein -0.67 0.32 -0.31
82 AT4G01900 GLNB1 homolog GLNB1 homolog, PII -0.67 0.33 -0.32
83 AT4G28706 pfkB-like carbohydrate kinase family protein -0.67 0.31 -0.31
84 AT4G30520 Leucine-rich repeat protein kinase family protein SENESCENCE-ASSOCIATED
RECEPTOR-LIKE KINASE		 -0.67 0.34 -0.32
85 AT5G48030 gametophytic factor 2 gametophytic factor 2 0.67 0.31 -0.29
86 AT3G01960 unknown protein; Has 13 Blast hits to 13 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 13; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.67 0.34 -0.34
87 AT1G52220 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast
thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: photosystem I P
subunit (TAIR:AT2G46820.2); Has 291 Blast hits to 291
proteins in 50 species: Archae - 0; Bacteria - 90; Metazoa
- 0; Fungi - 0; Plants - 200; Viruses - 0; Other Eukaryotes
- 1 (source: NCBI BLink).		 -0.67 0.32 -0.31
88 AT2G04050 MATE efflux family protein 0.67 0.32 -0.3
89 AT5G51440 HSP20-like chaperones superfamily protein 0.67 0.3 -0.31
90 AT5G62790 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1-deoxy-D-xylulose 5-phosphate
reductoisomerase,
PIGMENT-DEFECTIVE EMBRYO 129		 -0.66 0.32 -0.32
91 AT4G23890 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane, chloroplast; EXPRESSED IN:
22 plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF3252 (InterPro:IPR021659); Has 287 Blast hits to 287
proteins in 81 species: Archae - 0; Bacteria - 118; Metazoa
- 12; Fungi - 6; Plants - 40; Viruses - 0; Other Eukaryotes
- 111 (source: NCBI BLink).		 CHLORORESPIRATORY REDUCTION 31,
NADH dehydrogenase-like complex S		 -0.66 0.32 -0.34
92 AT1G10130 endoplasmic reticulum-type calcium-transporting ATPase 3 ARABIDOPSIS THALIANA ER-TYPE
CA2+-ATPASE 3, endoplasmic
reticulum-type
calcium-transporting ATPase 3		 0.66 0.29 -0.3
93 AT3G01720 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G25265.1); Has 374 Blast hits to 211 proteins in
23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 316; Viruses - 0; Other Eukaryotes - 58
(source: NCBI BLink).		 0.66 0.32 -0.33
94 AT5G22790 reticulata-related 1 reticulata-related 1 0.66 0.33 -0.32
95 AT2G35450 catalytics;hydrolases -0.66 0.32 -0.3
96 AT3G14610 cytochrome P450, family 72, subfamily A, polypeptide 7 cytochrome P450, family 72,
subfamily A, polypeptide 7		 0.66 0.3 -0.32
97 AT5G60040 nuclear RNA polymerase C1 nuclear RNA polymerase C1 0.66 0.3 -0.33
98 AT1G21065 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Uncharacterised protein family UPF0047
(InterPro:IPR001602); Has 3800 Blast hits to 3784 proteins
in 1137 species: Archae - 215; Bacteria - 2154; Metazoa -
42; Fungi - 99; Plants - 99; Viruses - 0; Other Eukaryotes
- 1191 (source: NCBI BLink).		 -0.66 0.31 -0.32
99 AT2G27290 Protein of unknown function (DUF1279) -0.66 0.31 -0.28
100 AT1G03270 CBS domain-containing protein with a domain of unknown
function (DUF21)		 -0.65 0.31 -0.32
101 AT5G45850 Protein of unknown function (DUF688) -0.65 0.32 -0.35
102 AT5G49210 unknown protein; Has 3675 Blast hits to 2315 proteins in
312 species: Archae - 2; Bacteria - 342; Metazoa - 1190;
Fungi - 281; Plants - 114; Viruses - 4; Other Eukaryotes -
1742 (source: NCBI BLink).		 0.65 0.32 -0.31
103 AT4G08770 Peroxidase superfamily protein peroxidase 37 0.65 0.32 -0.31
104 AT1G32220 NAD(P)-binding Rossmann-fold superfamily protein -0.65 0.34 -0.34
105 AT5G23630 phosphate deficiency response 2 MALE GAMETOGENESIS IMPAIRED
ANTHERS, phosphate deficiency
response 2, PI DEFICIENCY RESPONSE
2		 0.65 0.32 -0.34
106 AT3G01980 NAD(P)-binding Rossmann-fold superfamily protein -0.65 0.31 -0.32
107 AT4G27390 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to
17322 proteins in 780 species: Archae - 12; Bacteria -
1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses
- 0; Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.65 0.3 -0.29
108 AT4G12970 stomagen EPFL9, STOMAGEN -0.65 0.31 -0.32
109 AT1G66890 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; BEST Arabidopsis thaliana protein match is:
50S ribosomal protein-related (TAIR:AT5G16200.1); Has 36
Blast hits to 36 proteins in 7 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.64 0.34 -0.32
110 AT1G67080 abscisic acid (aba)-deficient 4 abscisic acid (ABA)-deficient 4 -0.64 0.3 -0.31
111 AT2G42750 DNAJ heat shock N-terminal domain-containing protein -0.64 0.32 -0.33
112 AT4G20030 RNA-binding (RRM/RBD/RNP motifs) family protein -0.64 0.31 -0.34
113 AT4G15560 Deoxyxylulose-5-phosphate synthase AtCLA1, CLA, CLOROPLASTOS
ALTERADOS 1, DEF,
1-DEOXY-D-XYLULOSE 5-PHOSPHATE
SYNTHASE 2, 1-DEOXY-D-XYLULOSE
5-PHOSPHATE SYNTHASE		 -0.64 0.31 -0.32
114 AT2G03550 alpha/beta-Hydrolases superfamily protein -0.64 0.3 -0.32
115 AT2G17340 Uncharacterised conserved protein (UCP030210) -0.64 0.31 -0.31
116 AT3G19790 unknown protein; Has 32 Blast hits to 26 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 13; Fungi - 2;
Plants - 14; Viruses - 0; Other Eukaryotes - 3 (source:
NCBI BLink).		 -0.64 0.31 -0.33
117 AT1G78020 Protein of unknown function (DUF581) -0.64 0.3 -0.32
118 AT5G27560 Domain of unknown function (DUF1995) -0.64 0.33 -0.32
119 AT5G59080 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: response to oxidative stress; LOCATED IN:
chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED
DURING: 9 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT3G46880.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.64 0.32 -0.32
120 AT1G62250 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 23
plant structures; EXPRESSED DURING: 15 growth stages; Has
30 Blast hits to 30 proteins in 13 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.63 0.34 -0.31
121 AT5G04900 NYC1-like NYC1-like -0.63 0.32 -0.3
122 AT3G62000 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.63 0.3 -0.33
123 AT3G16280 Integrase-type DNA-binding superfamily protein -0.63 0.32 -0.29
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
124 C0159 MST_1505.6 - - - -0.63 0.45 -0.46
125 C0162 MST_1588.3 - - - -0.63 0.46 -0.43