AT3G30190 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT3G30190
Description transposable element gene
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G30190 transposable element gene 1 0.35 -0.32
2 AT2G46940 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G62070.1); Has 143 Blast hits
to 141 proteins in 14 species: Archae - 0; Bacteria - 0;
Metazoa - 4; Fungi - 0; Plants - 139; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.76 0.31 -0.32
3 AT2G45290 Transketolase 0.7 0.33 -0.33
4 AT2G02660 F-box associated ubiquitination effector family protein -0.7 0.33 -0.31
5 AT5G28560 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
vacuole; Has 0 Blast hits to 0 proteins in 0 species
(source: NCBI BLink).		 -0.7 0.29 -0.3
6 AT1G66750 CDK-activating kinase 4 AT;CDKD;2, CDK-activating kinase
4, CDK-ACTIVATING KINASE 4,
CYCLIN-DEPENDENT KINASE D1;2,
CDKD;2		 -0.69 0.32 -0.29
7 AT1G17410 Nucleoside diphosphate kinase family protein -0.69 0.32 -0.32
8 AT4G14840 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G22520.1); Has 1681 Blast hits
to 1532 proteins in 283 species: Archae - 19; Bacteria -
179; Metazoa - 579; Fungi - 131; Plants - 223; Viruses - 5;
Other Eukaryotes - 545 (source: NCBI BLink).		 0.68 0.32 -0.31
9 AT5G60090 Protein kinase superfamily protein 0.68 0.32 -0.32
10 AT5G12230 MED19A; BEST Arabidopsis thaliana protein match is: unknown
protein (TAIR:AT5G19480.2); Has 1807 Blast hits to 1807
proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa
- 736; Fungi - 347; Plants - 385; Viruses - 0; Other
Eukaryotes - 339 (source: NCBI BLink).		 MED19A -0.67 0.31 -0.31
11 AT5G14470 GHMP kinase family protein -0.67 0.33 -0.31
12 AT3G32110 transposable element gene 0.66 0.32 -0.32
13 AT3G15890 Protein kinase superfamily protein -0.66 0.3 -0.33
14 AT1G21710 8-oxoguanine-DNA glycosylase 1 ARABIDOPSIS 8-OXOGUANINE-DNA
GLYCOSYLASE 1, 8-oxoguanine-DNA
glycosylase 1		 0.65 0.33 -0.28
15 AT1G53790 F-box and associated interaction domains-containing protein 0.65 0.31 -0.32
16 AT2G43280 Far-red impaired responsive (FAR1) family protein -0.65 0.3 -0.3
17 AT4G03480 Ankyrin repeat family protein -0.64 0.29 -0.3
18 AT5G06510 nuclear factor Y, subunit A10 nuclear factor Y, subunit A10 0.64 0.33 -0.33
19 AT3G09130 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G42786.1); Has 7 Blast hits to
7 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.64 0.32 -0.33
20 AT3G07130 purple acid phosphatase 15 PURPLE ACID PHOSPHATASE 15, purple
acid phosphatase 15		 0.64 0.33 -0.3
21 AT3G50420 Pentatricopeptide repeat (PPR) superfamily protein 0.64 0.33 -0.32
22 AT2G38880 nuclear factor Y, subunit B1 HEME ACTIVATOR PROTEIN (YEAST)
HOMOLOG 3, NUCLEAR FACTOR Y
SUBUNIT B1, HEME ACTIVATOR PROTEIN
(YEAST) HOMOLOG 3, HEME ACTIVATOR
PROTEIN (YEAST) HOMOLOG 3A,
nuclear factor Y, subunit B1		 -0.63 0.31 -0.32
23 AT1G62940 acyl-CoA synthetase 5 acyl-CoA synthetase 5 0.63 0.32 -0.31
24 AT4G07450 transposable element gene -0.63 0.33 -0.29
25 AT5G28210 mRNA capping enzyme family protein -0.63 0.33 -0.32
26 AT1G78990 HXXXD-type acyl-transferase family protein -0.63 0.32 -0.33
27 AT5G42560 Abscisic acid-responsive (TB2/DP1, HVA22) family protein -0.63 0.31 -0.3
28 AT2G21600 endoplasmatic reticulum retrieval protein 1B endoplasmatic reticulum retrieval
protein 1B, endoplasmatic
reticulum retrieval protein 1B		 -0.63 0.32 -0.33
29 AT1G59650 Protein of unknown function (DUF1336) CW14 0.63 0.32 -0.31
30 AT2G23945 Eukaryotic aspartyl protease family protein 0.62 0.33 -0.33
31 AT4G03770 transposable element gene -0.62 0.33 -0.31
32 AT1G68270 AMP-dependent synthetase and ligase family protein 0.62 0.32 -0.3
33 AT5G57200 ENTH/ANTH/VHS superfamily protein 0.62 0.34 -0.32
34 AT1G32320 MAP kinase kinase 10 MAP kinase kinase 10, MAP kinase
kinase 10		 -0.62 0.31 -0.33
35 AT5G65170 VQ motif-containing protein 0.62 0.3 -0.33
36 AT3G06110 MAPK phosphatase 2 ARABIDOPSIS MAPK PHOSPHATASE 2,
DUAL-SPECIFICITY PROTEIN
PHOSPHATASE 1B, MAPK phosphatase 2		 -0.62 0.31 -0.3
37 AT5G01310 APRATAXIN-like APRATAXIN-like 0.62 0.33 -0.32
38 AT1G15700 ATPase, F1 complex, gamma subunit protein ATPC2 -0.62 0.33 -0.31
39 AT5G60320 Concanavalin A-like lectin protein kinase family protein -0.61 0.32 -0.31
40 AT5G24390 Ypt/Rab-GAP domain of gyp1p superfamily protein -0.61 0.32 -0.31
41 AT2G22180 hydroxyproline-rich glycoprotein family protein -0.61 0.31 -0.31
42 AT1G17590 nuclear factor Y, subunit A8 nuclear factor Y, subunit A8 0.61 0.3 -0.31
43 AT5G51160 Ankyrin repeat family protein 0.61 0.31 -0.29
44 AT3G59130 Cysteine/Histidine-rich C1 domain family protein -0.61 0.32 -0.3
45 AT1G49880 Erv1/Alr family protein AtErv1, EMBRYO DEFECTIVE 3106,
Erv1		 -0.61 0.33 -0.3
46 AT5G44740 Y-family DNA polymerase H Y-family DNA polymerase H -0.6 0.35 -0.32
47 AT4G15300 cytochrome P450, family 702, subfamily A, polypeptide 2 cytochrome P450, family 702,
subfamily A, polypeptide 2		 0.6 0.32 -0.34
48 AT1G72830 nuclear factor Y, subunit A3 ATHAP2C, HAP2C, nuclear factor Y,
subunit A3		 0.6 0.32 -0.31
49 AT3G30846 transposable element gene -0.6 0.3 -0.32
50 AT3G07930 DNA glycosylase superfamily protein -0.6 0.33 -0.31
51 AT2G21920 F-box associated ubiquitination effector family protein -0.6 0.3 -0.31
52 AT3G30750 transposable element gene -0.6 0.31 -0.32
53 AT1G08750 Peptidase C13 family -0.6 0.32 -0.31
54 AT3G42350 transposable element gene 0.59 0.32 -0.32
55 AT2G30730 Protein kinase superfamily protein -0.59 0.32 -0.33
56 AT3G60410 Protein of unknown function (DUF1639) -0.59 0.32 -0.31
57 ATMG00050 hypothetical protein ORF131 -0.59 0.31 -0.33
58 AT3G17620 F-box and associated interaction domains-containing protein -0.59 0.32 -0.31
59 AT3G11530 Vacuolar protein sorting 55 (VPS55) family protein -0.59 0.32 -0.31
60 AT2G29220 Concanavalin A-like lectin protein kinase family protein 0.59 0.31 -0.33
61 AT2G19180 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G16840.1); Has 64 Blast hits
to 64 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.59 0.32 -0.31
62 AT5G37520 Protein of Unknown Function (DUF239) -0.59 0.31 -0.31
63 AT4G31610 Transcriptional factor B3 family protein REPRODUCTIVE MERISTEM 1,
REPRODUCTIVE MERISTEM 1		 0.58 0.32 -0.31
64 AT2G16835 Aquaporin-like superfamily protein 0.58 0.31 -0.31
65 AT4G39590 Galactose oxidase/kelch repeat superfamily protein -0.58 0.34 -0.3
66 AT4G30380 Barwin-related endoglucanase 0.58 0.31 -0.3
67 AT2G45650 AGAMOUS-like 6 AGAMOUS-like 6 0.58 0.31 -0.32
68 AT5G04210 CCCH-type zinc fingerfamily protein with RNA-binding domain -0.58 0.31 -0.3
69 AT1G09795 ATP phosphoribosyl transferase 2 ATP phosphoribosyl transferase 2,
ATP phosphoribosyl transferase 2,
HISN1B		 -0.58 0.32 -0.32
70 AT4G08030 transposable element gene -0.58 0.32 -0.3
71 AT3G56740 Ubiquitin-associated (UBA) protein -0.58 0.32 -0.29
72 AT3G20950 cytochrome P450, family 705, subfamily A, polypeptide 32 cytochrome P450, family 705,
subfamily A, polypeptide 32		 -0.58 0.31 -0.31
73 AT4G11870 unknown protein; Has 98 Blast hits to 93 proteins in 36
species: Archae - 2; Bacteria - 26; Metazoa - 15; Fungi -
20; Plants - 2; Viruses - 0; Other Eukaryotes - 33 (source:
NCBI BLink).		 -0.58 0.3 -0.3
74 AT5G35710 transposable element gene -0.58 0.32 -0.3
75 AT1G29770 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 -0.58 0.31 -0.33
76 AT4G18593 dual specificity protein phosphatase-related -0.57 0.33 -0.31
77 AT1G40390 DNAse I-like superfamily protein 0.57 0.33 -0.31
78 AT2G41420 proline-rich family protein WINDHOSE 2 -0.57 0.3 -0.3
79 AT2G44730 Alcohol dehydrogenase transcription factor Myb/SANT-like
family protein		 -0.57 0.33 -0.31
80 AT2G14550 pseudogene, putative pre-mRNA splicing factor,
non-consensus splice donor TA at exon 5; blastp match of
67% identity and 1.1e-68 P-value to
GP|28374170|gb|AAH45264.1||BC045264 Similar to splicing
factor 3b, subunit 4, 49kD {Xenopus laevis}		 -0.57 0.33 -0.29
81 AT5G01860 C2H2 and C2HC zinc fingers superfamily protein 0.57 0.31 -0.32
82 AT4G13130 Cysteine/Histidine-rich C1 domain family protein -0.57 0.33 -0.3
83 AT5G39370 Curculin-like (mannose-binding) lectin family protein -0.57 0.3 -0.29
84 AT1G07300 josephin protein-related -0.57 0.32 -0.34
85 AT5G47620 RNA-binding (RRM/RBD/RNP motifs) family protein 0.57 0.32 -0.3
86 AT1G17370 oligouridylate binding protein 1B oligouridylate binding protein 1B -0.57 0.34 -0.3
87 AT2G01520 MLP-like protein 328 MLP-like protein 328,
(Zusammen-CA)-enhanced 1		 -0.57 0.31 -0.34
88 AT4G13230 Late embryogenesis abundant protein (LEA) family protein -0.56 0.34 -0.3
89 AT2G03190 SKP1-like 16 SKP1-like 16, SKP1-like 16 0.56 0.31 -0.3
90 AT4G05550 transposable element gene -0.56 0.32 -0.32
91 AT5G46660 protein kinase C-like zinc finger protein 0.56 0.32 -0.33
92 AT5G51760 Protein phosphatase 2C family protein ABA-hypersensitive germination 1 0.56 0.33 -0.31
93 AT2G36410 Family of unknown function (DUF662) -0.56 0.32 -0.31
94 AT4G32375 Pectin lyase-like superfamily protein 0.56 0.33 -0.3
95 AT3G29010 Biotin/lipoate A/B protein ligase family -0.56 0.34 -0.32
96 AT3G20140 cytochrome P450, family 705, subfamily A, polypeptide 23 cytochrome P450, family 705,
subfamily A, polypeptide 23		 -0.56 0.31 -0.31
97 AT5G10230 annexin 7 ANNEXIN 7, annexin 7 -0.55 0.32 -0.29
98 AT4G18180 Pectin lyase-like superfamily protein 0.55 0.33 -0.34
99 AT5G64700 nodulin MtN21 /EamA-like transporter family protein -0.55 0.33 -0.31
100 AT5G54855 Pollen Ole e 1 allergen and extensin family protein -0.55 0.33 -0.32
101 AT5G43340 phosphate transporter 1;6 phosphate transporter 1;6,
PHOSPHATE TRANSPORTER 6		 0.55 0.32 -0.33
102 AT5G46200 Protein of Unknown Function (DUF239) -0.55 0.33 -0.3
103 AT5G13530 protein kinases;ubiquitin-protein ligases KEEP ON GOING -0.55 0.34 -0.32
104 AT1G53930 Ubiquitin-like superfamily protein -0.55 0.31 -0.33
105 AT5G60970 TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor
5		 TEOSINTE BRANCHED 1, cycloidea and
PCF transcription factor 5		 -0.55 0.32 -0.31
106 AT2G19600 K+ efflux antiporter 4 K+ efflux antiporter 4, KEA4, K+
efflux antiporter 4		 0.55 0.3 -0.32
107 AT1G42700 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
response to cold; LOCATED IN: nucleus; BEST Arabidopsis
thaliana protein match is: Plant transposase (Ptta/En/Spm
family) (TAIR:AT1G40087.1); Has 10 Blast hits to 10
proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 10; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.55 0.32 -0.33
108 AT2G06840 transposable element gene -0.54 0.32 -0.32
109 AT4G13960 F-box/RNI-like superfamily protein -0.54 0.28 -0.33
110 AT5G55720 Pectin lyase-like superfamily protein -0.54 0.31 -0.32
111 AT1G79990 structural molecules -0.54 0.32 -0.32
112 AT3G45390 Concanavalin A-like lectin protein kinase family protein -0.54 0.35 -0.33
113 AT3G47700 RINT-1 / TIP-1 family maigo2 -0.54 0.32 -0.33
114 AT4G04120 transposable element gene -0.54 0.32 -0.32
115 AT4G39770 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 trehalose-6-phosphate phosphatase
H		 -0.54 0.28 -0.32
116 AT1G52240 RHO guanyl-nucleotide exchange factor 11 ATROPGEF11, phytochrome
interacting RopGEF 1, RHO
guanyl-nucleotide exchange factor
11		 -0.54 0.32 -0.29
117 AT1G47770 Beta-galactosidase related protein -0.54 0.3 -0.31
118 AT3G30230 myosin heavy chain-related -0.54 0.3 -0.3
119 AT3G57270 beta-1,3-glucanase 1 beta-1,3-glucanase 1 -0.54 0.34 -0.3
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
120 C0145 Maltotetraose - Maltotetraose starch degradation II 0.8 0.44 -0.49 C0145
121 C0105 Glutathione disulfide - Glutathione disulfide sulfate reduction II (assimilatory),
selenate reduction,
glutathione redox reactions I,
ascorbate glutathione cycle,
glutathione redox reactions II 		0.74 0.46 -0.47 C0105
122 C0188 Nicotine (-)-Nicotine Nicotine - 0.66 0.45 -0.46 C0188
123 C0035 4-Methoxyindol-3-ylmethylglucosinolate - 4-Methoxy-3-indolylmethyl glucosinolate glucosinolate biosynthesis from tryptophan,
indole glucosinolate breakdown (active in intact plant cell) 		0.63 0.43 -0.46 C0035