AT2G10400 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT2G10400
Description transposable element gene
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G10400 transposable element gene 1 0.32 -0.3
2 AT4G00190 pectin methylesterase 38 A. THALIANA PECTIN METHYLESTERASE
38, pectin methylesterase 38		 0.82 0.31 -0.35
3 AT3G44980 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G07215.1); Has 2 Blast hits to
2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.74 0.3 -0.31
4 AT2G34360 MATE efflux family protein -0.73 0.32 -0.33
5 AT2G47200 unknown protein; Has 3 Blast hits to 3 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.72 0.31 -0.31
6 AT5G49945 Protein of unknown function (DUF1682) 0.71 0.29 -0.33
7 AT4G29000 Tesmin/TSO1-like CXC domain-containing protein 0.69 0.31 -0.28
8 AT5G37620 Cysteine/Histidine-rich C1 domain family protein -0.69 0.32 -0.3
9 AT1G54955 transposable element gene 0.69 0.3 -0.33
10 AT5G45960 GDSL-like Lipase/Acylhydrolase superfamily protein 0.68 0.3 -0.31
11 AT3G16570 rapid alkalinization factor 23 ARABIDOPSIS RAPID ALKALINIZATION
FACTOR 23, rapid alkalinization
factor 23		 0.68 0.3 -0.31
12 AT4G29200 Beta-galactosidase related protein 0.68 0.33 -0.32
13 AT2G21000 transposable element gene 0.68 0.3 -0.31
14 AT1G76710 SET domain group 26 ASH1 RELATED PROTEIN 1,
ASH1-RELATED PROTEIN 1, SET domain
group 26		 -0.68 0.3 -0.33
15 AT3G62230 F-box family protein DUO1-activated F-box 1 0.67 0.32 -0.29
16 AT4G08940 Ubiquitin carboxyl-terminal hydrolase family protein 0.67 0.31 -0.31
17 AT3G25880 NAD(P)-binding Rossmann-fold superfamily protein 0.67 0.32 -0.3
18 AT3G11640 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT3G52480.1); Has 36 Blast
hits to 36 proteins in 7 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.67 0.3 -0.32
19 AT1G74390 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 0.67 0.33 -0.33
20 AT2G30040 mitogen-activated protein kinase kinase kinase 14 mitogen-activated protein kinase
kinase kinase 14		 -0.67 0.31 -0.31
21 AT1G74490 Protein kinase superfamily protein -0.67 0.3 -0.32
22 AT1G60060 Serine/threonine-protein kinase WNK (With No
Lysine)-related		 0.67 0.29 -0.3
23 AT2G15660 AGAMOUS-like 95 AGAMOUS-like 95 -0.66 0.33 -0.34
24 AT2G01300 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G15010.1); Has 73 Blast hits
to 73 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.66 0.31 -0.32
25 AT1G02320 unknown protein; Has 0 Blast hits to 0 proteins in 0
species (source: NCBI BLink).		 0.66 0.34 -0.31
26 AT4G21500 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G05018.1); Has 20 Blast
hits to 20 proteins in 8 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 17; Viruses - 0; Other
Eukaryotes - 3 (source: NCBI BLink).		 0.66 0.33 -0.32
27 AT5G65520 Tetratricopeptide repeat (TPR)-like superfamily protein 0.66 0.31 -0.33
28 AT5G56130 Transducin/WD40 repeat-like superfamily protein AtTEX1, TEX1, THO3 0.65 0.3 -0.32
29 AT2G16040 hAT dimerisation domain-containing protein /
transposase-related		 0.65 0.29 -0.33
30 AT2G32980 unknown protein; Has 158 Blast hits to 154 proteins in 73
species: Archae - 0; Bacteria - 61; Metazoa - 0; Fungi - 0;
Plants - 55; Viruses - 28; Other Eukaryotes - 14 (source:
NCBI BLink).		 0.65 0.34 -0.32
31 AT3G28840 Protein of unknown function (DUF1216) 0.65 0.31 -0.31
32 AT2G10620 transposable element gene 0.65 0.3 -0.33
33 AT1G10010 amino acid permease 8 amino acid permease 8, ATAAP8 0.65 0.33 -0.34
34 AT4G04530 transposable element gene 0.65 0.33 -0.31
35 AT3G18380 sequence-specific DNA binding transcription
factors;sequence-specific DNA binding		 SAWADEE homeodomain homolog 2 0.65 0.33 -0.3
36 AT1G20550 O-fucosyltransferase family protein -0.65 0.33 -0.29
37 AT3G50170 Plant protein of unknown function (DUF247) 0.65 0.32 -0.31
38 AT2G34330 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G29540.1); Has 10 Blast hits
to 10 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 10; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.64 0.3 -0.35
39 AT4G08560 pumilio 15 pumilio 15, pumilio 15 0.64 0.33 -0.33
40 AT3G42440 transposable element gene -0.64 0.32 -0.32
41 AT5G14890 NHL domain-containing protein 0.64 0.34 -0.33
42 AT1G77340 Pentatricopeptide repeat (PPR) superfamily protein 0.64 0.3 -0.33
43 AT5G25430 HCO3- transporter family 0.64 0.31 -0.31
44 AT5G28040 DNA-binding storekeeper protein-related transcriptional
regulator		 0.64 0.32 -0.33
45 AT5G15020 SIN3-like 2 SIN3-like 2 -0.64 0.3 -0.3
46 AT5G15440 EID1-like 1 EID1-like 1 0.64 0.31 -0.31
47 AT1G32040 transposable element gene 0.63 0.3 -0.32
48 AT4G17690 Peroxidase superfamily protein 0.63 0.31 -0.32
49 AT1G47350 F-box associated ubiquitination effector family protein 0.63 0.33 -0.29
50 AT4G28940 Phosphorylase superfamily protein -0.63 0.32 -0.32
51 AT3G22040 Domain of unknown function (DUF26) 0.63 0.32 -0.31
52 AT5G37420 Family of unknown function (DUF577) -0.63 0.34 -0.34
53 AT3G27150 Galactose oxidase/kelch repeat superfamily protein -0.63 0.33 -0.33
54 AT1G49190 response regulator 19 response regulator 19, response
regulator 19		 -0.63 0.29 -0.32
55 AT2G31210 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.63 0.32 -0.34
56 AT2G45930 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT4G16090.1); Has 161 Blast hits to
161 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 161; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.63 0.31 -0.3
57 AT4G05640 transposable element gene 0.63 0.33 -0.32
58 AT2G03680 spiral1 SKU6, SPIRAL1 0.62 0.31 -0.31
59 AT5G37900 TRAF-like superfamily protein 0.62 0.34 -0.31
60 AT5G25370 phospholipase D alpha 3 phospholipase D alpha 3 0.62 0.34 -0.31
61 AT5G64690 neurofilament triplet H protein-related -0.62 0.31 -0.31
62 AT4G05280 transposable element gene -0.62 0.33 -0.3
63 AT4G23320 cysteine-rich RLK (RECEPTOR-like protein kinase) 24 cysteine-rich RLK (RECEPTOR-like
protein kinase) 24		 0.62 0.31 -0.28
64 AT5G42140 Regulator of chromosome condensation (RCC1) family with
FYVE zinc finger domain		 0.62 0.31 -0.31
65 AT2G30650 ATP-dependent caseinolytic (Clp) protease/crotonase family
protein		 0.62 0.29 -0.31
66 AT3G62880 Mitochondrial import inner membrane translocase subunit
Tim17/Tim22/Tim23 family protein		 ATOEP16-4 0.61 0.3 -0.33
67 AT2G47150 NAD(P)-binding Rossmann-fold superfamily protein -0.61 0.32 -0.35
68 AT5G53520 oligopeptide transporter 8 oligopeptide transporter 8,
oligopeptide transporter 8		 -0.61 0.31 -0.32
69 AT1G26900 Pentatricopeptide repeat (PPR) superfamily protein -0.61 0.32 -0.32
70 AT1G30300 Metallo-hydrolase/oxidoreductase superfamily protein -0.61 0.31 -0.3
71 AT5G01070 RING/FYVE/PHD zinc finger superfamily protein 0.61 0.31 -0.3
72 AT4G39420 unknown protein; Has 46 Blast hits to 40 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 44; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 0.61 0.31 -0.29
73 AT1G32850 ubiquitin-specific protease 11 ubiquitin-specific protease 11 -0.61 0.3 -0.3
74 AT5G35820 transposable element gene 0.61 0.31 -0.33
75 AT1G50750 Plant mobile domain protein family 0.61 0.33 -0.31
76 AT4G12920 Eukaryotic aspartyl protease family protein UNDEAD -0.6 0.3 -0.31
77 AT1G37010 BEST Arabidopsis thaliana protein match is: spindle pole
body component 98 (TAIR:AT5G06680.1); Has 15 Blast hits to
15 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 15; Viruses - 0; Other Eukaryotes
- 0 (source: NCBI BLink).		 0.6 0.31 -0.32
78 AT3G54270 sucrose-6F-phosphate phosphohydrolase family protein -0.6 0.31 -0.33
79 AT1G02340 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 FBI1, LONG HYPOCOTYL IN FAR-RED,
REDUCED PHYTOCHROME SIGNALING 1,
REDUCED SENSITIVITY TO FAR-RED
LIGHT 1		 0.6 0.3 -0.33
80 AT4G18330 Translation elongation factor EF1A/initiation factor
IF2gamma family protein		 0.6 0.34 -0.32
81 AT4G00355 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G45980.1); Has 100 Blast hits
to 97 proteins in 16 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 100; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 ATG8-interacting protein 2 0.6 0.32 -0.31
82 AT1G05330 unknown protein; Has 6 Blast hits to 6 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.6 0.3 -0.3
83 AT4G13820 Leucine-rich repeat (LRR) family protein -0.6 0.3 -0.31
84 AT1G04330 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT3G23170.1); Has 74 Blast hits to 74
proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.6 0.32 -0.32
85 AT5G05260 cytochrome p450 79a2 cytochrome p450 79a2 -0.6 0.31 -0.35
86 AT3G22870 F-box and associated interaction domains-containing protein 0.6 0.33 -0.31
87 AT5G19640 Major facilitator superfamily protein 0.59 0.34 -0.3
88 AT2G30430 unknown protein; Has 3 Blast hits to 3 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.59 0.3 -0.31
89 AT5G45830 delay of germination 1 ATDOG1, DELAY OF GERMINATION 1,
GLUCOSE SENSING QTL 5		 0.59 0.33 -0.32
90 AT5G49350 Glycine-rich protein family -0.59 0.32 -0.33
91 AT2G05390 transposable element gene 0.59 0.3 -0.32
92 AT5G50500 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.59 0.32 -0.3
93 AT4G23090 unknown protein; Has 7 Blast hits to 7 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.59 0.33 -0.31
94 AT2G36710 Pectin lyase-like superfamily protein 0.59 0.33 -0.31
95 AT3G29796 unknown protein; Has 28 Blast hits to 20 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 18; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 9 (source: NCBI
BLink).		 -0.59 0.32 -0.33
96 AT4G03930 Plant invertase/pectin methylesterase inhibitor superfamily 0.59 0.31 -0.32
97 AT3G50400 GDSL-like Lipase/Acylhydrolase superfamily protein -0.59 0.31 -0.3
98 AT5G60740 ABC transporter family protein ATP-binding cassette G28 0.59 0.31 -0.3
99 AT2G23800 geranylgeranyl pyrophosphate synthase 2 geranylgeranyl pyrophosphate
synthase 2, GERANYLGERANYL
PYROPHOSPHATE SYNTHASE 5		 0.59 0.32 -0.32
100 AT1G41795 transposable element gene 0.59 0.31 -0.34
101 AT1G08630 threonine aldolase 1 threonine aldolase 1 0.59 0.31 -0.31
102 AT4G30660 Low temperature and salt responsive protein family 0.58 0.32 -0.31
103 AT5G02920 F-box/RNI-like superfamily protein -0.58 0.33 -0.3
104 AT4G07720 pseudogene, hypothetical protein -0.58 0.3 -0.31
105 AT1G32120 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: membrane; EXPRESSED
IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, C
globular stage, F mature embryo stage, petal
differentiation and expansion stage, E expanded cotyledon
stage; CONTAINS InterPro DOMAIN/s: Aminotransferase-like,
plant mobile domain (InterPro:IPR019557), Protein of
unknown function DUF716 (InterPro:IPR006904); BEST
Arabidopsis thaliana protein match is:
Aminotransferase-like, plant mobile domain family protein
(TAIR:AT1G51538.1); Has 16736 Blast hits to 9656 proteins
in 576 species: Archae - 4; Bacteria - 1182; Metazoa -
7098; Fungi - 2631; Plants - 1178; Viruses - 174; Other
Eukaryotes - 4469 (source: NCBI BLink).		 -0.58 0.31 -0.32
106 AT4G31070 Tetratricopeptide repeat (TPR)-like superfamily protein 0.58 0.32 -0.29
107 AT1G48290 transposable element gene -0.58 0.31 -0.31
108 AT5G48200 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.58 0.3 -0.32
109 AT2G38420 Pentatricopeptide repeat (PPR) superfamily protein 0.58 0.33 -0.32
110 AT2G15340 glycine-rich protein -0.58 0.33 -0.32
111 AT2G40935 PLAC8 family protein 0.58 0.31 -0.29
112 AT5G10090 Tetratricopeptide repeat (TPR)-like superfamily protein tetratricopeptide repeat 13 0.58 0.31 -0.32
113 AT4G20470 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.57 0.32 -0.31
114 AT5G64360 Chaperone DnaJ-domain superfamily protein EMF1-Interacting Protein 1 -0.57 0.34 -0.28
115 AT1G17950 myb domain protein 52 MYB DOMAIN PROTEIN 52, BW52, myb
domain protein 52		 -0.57 0.32 -0.32
116 AT4G36940 nicotinate phosphoribosyltransferase 1 nicotinate
phosphoribosyltransferase 1		 -0.57 0.3 -0.31
117 AT5G62480 glutathione S-transferase tau 9 glutathione S-transferase tau 9,
GLUTATHIONE S-TRANSFERASE 14,
GLUTATHIONE S-TRANSFERASE 14B,
glutathione S-transferase tau 9		 -0.57 0.3 -0.3
118 ATMG00070 NADH dehydrogenase subunit 9 NADH dehydrogenase subunit 9 -0.57 0.31 -0.32
119 AT4G21590 endonuclease 3 endonuclease 3 -0.56 0.33 -0.3
120 AT2G45610 alpha/beta-Hydrolases superfamily protein -0.56 0.29 -0.31
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
121 C0008 γ-Aminobutyric acid - 4-Aminobutyrate glutamate degradation IV,
4-aminobutyrate degradation IV,
putrescine degradation IV 		-0.67 0.31 -0.32 C0008
122 C0221 Quercetin-3-(2''-O-α-rhamnosyl)-O-β-glucosyl-7-O-α-rhamnoside Quercetin-3-(2''-O-α-L-rhamnosyl)-O-β-D-glucosyl-7-O-α-L-rhamnoside - quercetin glucoside biosynthesis (Arabidopsis) -0.63 0.45 -0.47