AT2G43140 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT2G43140
Description basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G43140 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 1 0.29 -0.35
2 AT1G76160 SKU5 similar 5 SKU5 similar 5 0.86 0.31 -0.31
3 AT1G07140 Pleckstrin homology (PH) domain superfamily protein SIRANBP 0.85 0.3 -0.33
4 AT1G66070 Translation initiation factor eIF3 subunit 0.84 0.3 -0.32
5 AT2G40330 PYR1-like 6 PYR1-like 6, regulatory components
of ABA receptor 9		 0.84 0.3 -0.33
6 AT1G14210 Ribonuclease T2 family protein 0.84 0.31 -0.32
7 AT1G51140 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.83 0.29 -0.33
8 AT5G48430 Eukaryotic aspartyl protease family protein 0.82 0.33 -0.3
9 AT1G09780 Phosphoglycerate mutase,
2,3-bisphosphoglycerate-independent		 2,3-biphosphoglycerate-independent
phosphoglycerate mutase 1		 0.82 0.3 -0.31
10 AT4G22910 FIZZY-related 2 cell cycle switch protein 52 A1,
FIZZY-related 2		 0.82 0.31 -0.32
11 AT4G21410 cysteine-rich RLK (RECEPTOR-like protein kinase) 29 cysteine-rich RLK (RECEPTOR-like
protein kinase) 29		 0.81 0.32 -0.3
12 AT1G74270 Ribosomal protein L35Ae family protein 0.8 0.31 -0.29
13 AT3G02350 galacturonosyltransferase 9 galacturonosyltransferase 9 0.78 0.31 -0.31
14 AT3G14230 related to AP2 2 related to AP2 2 0.78 0.32 -0.31
15 AT3G51600 lipid transfer protein 5 lipid transfer protein 5 0.78 0.32 -0.29
16 AT3G11410 protein phosphatase 2CA AHG3, ARABIDOPSIS THALIANA PROTEIN
PHOSPHATASE 2CA, protein
phosphatase 2CA		 -0.78 0.32 -0.31
17 AT4G21870 HSP20-like chaperones superfamily protein 0.78 0.34 -0.32
18 AT3G14067 Subtilase family protein -0.77 0.32 -0.33
19 AT4G12390 pectin methylesterase inhibitor 1 pectin methylesterase inhibitor 1 0.77 0.31 -0.32
20 AT3G17390 S-adenosylmethionine synthetase family protein METHIONINE ADENOSYLTRANSFERASE 4,
METHIONINE OVER-ACCUMULATOR 3,
S-ADENOSYLMETHIONINE SYNTHETASE 3		 0.77 0.34 -0.35
21 AT4G00710 BR-signaling kinase 3 BR-signaling kinase 3 0.77 0.33 -0.29
22 AT5G61780 TUDOR-SN protein 2 Arabidopsis thaliana TUDOR-SN
protein 2, TUDOR-SN protein 2,
TUDOR-SN protein 2		 0.77 0.3 -0.34
23 AT2G43640 Signal recognition particle, SRP9/SRP14 subunit 0.76 0.33 -0.3
24 AT5G54900 RNA-binding protein 45A RNA-binding protein 45A,
RNA-binding protein 45A		 0.76 0.32 -0.32
25 AT5G05450 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.75 0.36 -0.3
26 AT4G33550 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.75 0.32 -0.33
27 AT4G12470 azelaic acid induced 1 azelaic acid induced 1 0.75 0.33 -0.29
28 AT1G26340 cytochrome B5 isoform A ARABIDOPSIS CYTOCHROME B5 ISOFORM
A, B5 #6, cytochrome B5 isoform A		 0.75 0.32 -0.32
29 AT4G15700 Thioredoxin superfamily protein 0.75 0.31 -0.31
30 AT5G59160 type one serine/threonine protein phosphatase 2 PROTOPORPHYRINOGEN OXIDASE, type
one serine/threonine protein
phosphatase 2		 0.75 0.31 -0.32
31 AT5G14040 phosphate transporter 3;1 phosphate transporter 3;1 0.75 0.32 -0.32
32 AT3G07630 arogenate dehydratase 2 arogenate dehydratase 2,
Arabidopsis thaliana arogenate
dehydratase 2		 0.75 0.28 -0.3
33 AT4G37450 arabinogalactan protein 18 arabinogalactan protein 18,
ATAGP18		 0.75 0.31 -0.31
34 AT5G11340 Acyl-CoA N-acyltransferases (NAT) superfamily protein 0.74 0.33 -0.33
35 AT3G25545 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 38
Blast hits to 38 proteins in 14 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 38; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.74 0.3 -0.3
36 AT1G71400 receptor like protein 12 receptor like protein 12, receptor
like protein 12		 0.74 0.33 -0.34
37 AT2G37870 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.74 0.31 -0.32
38 AT3G52950 CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing
protein		 0.74 0.31 -0.31
39 AT1G61740 Sulfite exporter TauE/SafE family protein 0.74 0.3 -0.34
40 AT2G27330 RNA-binding (RRM/RBD/RNP motifs) family protein 0.74 0.31 -0.31
41 AT1G05810 RAB GTPase homolog A5E ARA, ARA-1, ATRAB11D, ARABIDOPSIS
THALIANA RAB GTPASE HOMOLOG A5E,
RAB GTPase homolog A5E		 0.74 0.33 -0.33
42 AT2G20140 AAA-type ATPase family protein regulatory particle AAA-ATPase 2b 0.73 0.31 -0.33
43 AT4G15690 Thioredoxin superfamily protein 0.73 0.3 -0.3
44 AT1G05700 Leucine-rich repeat transmembrane protein kinase protein 0.73 0.31 -0.33
45 AT5G04310 Pectin lyase-like superfamily protein 0.73 0.32 -0.32
46 AT1G16870 mitochondrial 28S ribosomal protein S29-related 0.73 0.3 -0.31
47 AT3G53110 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 LOW EXPRESSION OF OSMOTICALLY
RESPONSIVE GENES 4		 0.73 0.35 -0.31
48 AT4G27080 PDI-like 5-4 ARABIDOPSIS THALIANA PROTEIN
DISULFIDE ISOMERASE 7, PDI-like
5-4, PROTEIN DISULFIDE ISOMERASE
7, PDI-like 5-4		 0.73 0.32 -0.3
49 AT1G76990 ACT domain repeat 3 ACT domain repeat 3 0.73 0.32 -0.3
50 AT1G55810 uridine kinase-like 3 uridine kinase-like 3 0.73 0.31 -0.33
51 AT4G19410 Pectinacetylesterase family protein 0.73 0.33 -0.32
52 AT4G27730 oligopeptide transporter 1 ARABIDOPSIS THALIANA OLIGOPEPTIDE
TRANSPORTER 6, oligopeptide
transporter 1		 0.72 0.33 -0.32
53 AT1G23090 sulfate transporter 91 sulfate transporter 91, SULTR3;3 0.72 0.32 -0.32
54 AT4G17030 expansin-like B1 AT-EXPR, expansin-like B1,
ATEXPR1, ATHEXP BETA 3.1,
expansin-like B1, EXPR		 -0.72 0.32 -0.33
55 AT5G05420 FKBP-like peptidyl-prolyl cis-trans isomerase family
protein		 0.72 0.34 -0.3
56 AT5G55630 Outward rectifying potassium channel protein ATKCO1, TANDEM PORE K+ CHANNEL 1,
CA2+ ACTIVATED OUTWARD RECTIFYING
K+ CHANNEL 1, TWO PORE K CHANNEL,
TWO PORE K CHANNEL 1		 0.72 0.3 -0.32
57 AT5G05440 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 PYRABACTIN RESISTANCE 1-LIKE 5,
regulatory component of ABA
receptor 8		 0.72 0.32 -0.31
58 AT1G79520 Cation efflux family protein -0.72 0.32 -0.32
59 AT4G17870 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 PYRABACTIN RESISTANCE 1,
regulatory component of ABA
receptor 11		 0.72 0.3 -0.31
60 AT5G18280 apyrase 2 apyrase 2, apyrase 2 0.72 0.29 -0.31
61 AT2G39450 Cation efflux family protein ATMTP11, MTP11 -0.72 0.29 -0.33
62 AT4G20840 FAD-binding Berberine family protein 0.71 0.32 -0.31
63 AT3G23300 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.71 0.29 -0.32
64 AT4G21400 cysteine-rich RLK (RECEPTOR-like protein kinase) 28 cysteine-rich RLK (RECEPTOR-like
protein kinase) 28		 0.71 0.32 -0.29
65 AT1G13440 glyceraldehyde-3-phosphate dehydrogenase C2 GLYCERALDEHYDE-3-PHOSPHATE
DEHYDROGENASE C-2,
glyceraldehyde-3-phosphate
dehydrogenase C2		 0.71 0.34 -0.34
66 AT3G27740 carbamoyl phosphate synthetase A carbamoyl phosphate synthetase A,
VENOSA 6		 0.71 0.32 -0.3
67 AT2G30060 Pleckstrin homology (PH) domain superfamily protein 0.71 0.32 -0.32
68 AT3G57420 Protein of unknown function (DUF288) 0.71 0.3 -0.33
69 AT3G07950 rhomboid protein-related 0.7 0.3 -0.31
70 AT3G59020 ARM repeat superfamily protein 0.7 0.32 -0.29
71 AT5G20640 Protein of unknown function (DUF567) 0.7 0.33 -0.29
72 AT1G22570 Major facilitator superfamily protein 0.7 0.32 -0.3
73 AT1G62380 ACC oxidase 2 ACC oxidase 2, ATACO2 0.7 0.3 -0.33
74 AT2G01580 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G07510.2); Has 129 Blast hits
to 129 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 129; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.7 0.32 -0.32
75 AT2G16430 purple acid phosphatase 10 ATPAP10, purple acid phosphatase
10		 0.7 0.31 -0.31
76 AT4G34000 abscisic acid responsive elements-binding factor 3 abscisic acid responsive
elements-binding factor 3, AtABF3,
DC3 PROMOTER-BINDING FACTOR 5		 -0.7 0.31 -0.32
77 AT3G46820 type one serine/threonine protein phosphatase 5 type one serine/threonine protein
phosphatase 5		 0.7 0.3 -0.3
78 AT5G59310 lipid transfer protein 4 lipid transfer protein 4 -0.7 0.32 -0.33
79 AT5G05430 RNA-binding protein 0.7 0.3 -0.33
80 AT5G63560 HXXXD-type acyl-transferase family protein -0.69 0.31 -0.32
81 AT2G18050 histone H1-3 histone H1-3 -0.69 0.32 -0.33
82 AT3G23640 heteroglycan glucosidase 1 heteroglycan glucosidase 1 -0.69 0.31 -0.33
83 AT3G14440 nine-cis-epoxycarotenoid dioxygenase 3 ATNCED3, nine-cis-epoxycarotenoid
dioxygenase 3, SUGAR INSENSITIVE
7, SALT TOLERANT 1		 -0.69 0.31 -0.33
84 AT5G59320 lipid transfer protein 3 lipid transfer protein 3 -0.69 0.31 -0.33
85 AT5G12140 cystatin-1 cystatin-1, cystatin-1 -0.68 0.32 -0.32
86 AT3G13784 cell wall invertase 5 cell wall invertase 5, cell wall
invertase 5		 -0.68 0.3 -0.29
87 AT4G32940 gamma vacuolar processing enzyme gamma vacuolar processing enzyme,
GAMMAVPE		 -0.68 0.3 -0.32
88 AT3G45900 Ribonuclease P protein subunit P38-related -0.67 0.31 -0.3
89 AT4G20880 ethylene-responsive nuclear protein / ethylene-regulated
nuclear protein (ERT2)		 -0.66 0.32 -0.31
90 AT3G50410 OBF binding protein 1 OBF binding protein 1 -0.66 0.32 -0.31
91 AT5G03190 conserved peptide upstream open reading frame 47 conserved peptide upstream open
reading frame 47		 -0.66 0.31 -0.31
92 AT1G55740 seed imbibition 1 seed imbibition 1, raffinose
synthase 1, seed imbibition 1		 -0.66 0.32 -0.33
93 AT3G24760 Galactose oxidase/kelch repeat superfamily protein -0.65 0.31 -0.31
94 AT5G18830 squamosa promoter binding protein-like 7 SQUAMOSA PROMOTER BINDING
PROTEIN-LIKE 7, squamosa promoter
binding protein-like 7		 -0.65 0.29 -0.33
95 AT3G53980 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.65 0.31 -0.32
96 AT2G43500 Plant regulator RWP-RK family protein -0.64 0.33 -0.31
97 AT1G75030 thaumatin-like protein 3 thaumatin-like protein 3,
thaumatin-like protein 3		 -0.64 0.31 -0.32
98 AT5G01880 RING/U-box superfamily protein -0.64 0.31 -0.31
99 AT1G76040 calcium-dependent protein kinase 29 calcium-dependent protein kinase
29		 -0.63 0.32 -0.3
100 AT4G12910 serine carboxypeptidase-like 20 serine carboxypeptidase-like 20 -0.63 0.32 -0.31
101 AT5G14640 shaggy-like kinase 13 SHAGGY-LIKE KINASE 13, shaggy-like
kinase 13		 -0.62 0.32 -0.32
102 AT5G24750 UDP-Glycosyltransferase superfamily protein -0.62 0.33 -0.31
103 AT5G52880 F-box family protein -0.62 0.31 -0.33
104 AT5G40640 unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN:
19 plant structures; EXPRESSED DURING: 7 growth stages;
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT3G27390.1); Has 104 Blast hits to 102 proteins in
14 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi -
0; Plants - 101; Viruses - 0; Other Eukaryotes - 1 (source:
NCBI BLink).		 -0.61 0.32 -0.31
105 AT5G13170 senescence-associated gene 29 AtSWEET15, senescence-associated
gene 29, SWEET15		 -0.61 0.29 -0.32
106 AT4G37970 cinnamyl alcohol dehydrogenase 6 ATCAD6, cinnamyl alcohol
dehydrogenase 6		 -0.61 0.34 -0.3
107 AT2G12400 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 25 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT2G25270.1); Has 177 Blast hits to 172 proteins in
23 species: Archae - 0; Bacteria - 2; Metazoa - 3; Fungi -
0; Plants - 164; Viruses - 0; Other Eukaryotes - 8 (source:
NCBI BLink).		 -0.61 0.31 -0.31
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
108 C0109 Guanine - Guanine guanine and guanosine salvage II,
guanosine nucleotides degradation II 		-0.78 0.45 -0.43 C0109
109 C0189 Nicotinic acid - Nicotinate pyridine nucleotide cycling (plants),
aldoxime degradation 		-0.74 0.31 -0.32 C0189
110 C0210 Phytol E-Phytol Phytol chlorophyll a degradation II,
chlorophyll a degradation,
phytol salvage pathway 		-0.71 0.45 -0.44 C0210
111 C0107 Glycine - Glycine 5-aminoimidazole ribonucleotide biosynthesis I,
gamma-glutamyl cycle,
folate polyglutamylation,
gamma-glutamyl cycle (plant pathway),
glutathione biosynthesis,
glutathione-mediated detoxification II,
folate transformations II,
indole glucosinolate breakdown (active in intact plant cell),
glycine cleavage complex,
camalexin biosynthesis,
thiamine biosynthesis II,
tRNA charging,
glycine biosynthesis,
glutathione degradation,
photorespiration 		-0.7 0.44 -0.45 C0107
112 C0097 Glucosamine-6-phosphate D-Glucosamine-6-phosphate D-Glucosamine-6-phosphate UDP-N-acetyl-D-glucosamine biosynthesis II -0.63 0.3 -0.32 C0097